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Sequences
The following sequences are available for this feature:
mRNA from alignment at JC12F:281965..284855- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012957-T2 ID=KJC3_012957-T2|Name=KJC3_012957-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2891bp|location=Sequence derived from alignment at JC12F:281965..284855- (Aspergillus niger KJC3)
GGCTCTTTCCCCGAAGGTCACCATGTCTCACCCGCAACAACAATGTGCGG
TCCGTGAATTTGTGTTTGGGGCCTAGTCTGCTGACTTCCTCATGGCTCAA
CTATAATGAGGGGAGATAGGCTATTCAGCGTTAGGCTGCGCTCAGTACGA
CGTTGTTCTTAAAAGATCAATAGCCAGGTCGCCATGATTCCCAGGATTGT
CATCAAGCATGCGGCCAACACACCAAGCTCGCATCGAAACCGAGGAGAAG
GCATTGGAAGCCTACCGCCAGGAGCGCTACCAGGGTAGCGCCCGAGTCCG
CCTGGATTGTCTGACCTTCGAGAATGGCTTTGGTCGCTTGATGGACGACG
GCCGAAATGCCCTCCGAATGGAGCAGATCCTTGAGATACAAGGGTGCCTC
CGTATCAATCGAGAGTACCATGTGCCCGTCTTGGTCCAAGCCACGGACTG
GGGCTCCCACATCAGGCTATTGCCGTGCGACACGGAGCCGTTTCCCGAGC
TGATCGTGCCCTTGAGCATGTCGCTGCGCGCCTTAGGCCACGAGAATGTC
ATCGCCGCAGCGCGAAAAAAGCTCTACGGCGAGAACCGATGGTGGGTGGT
CGATGTGTATGTGGAGGATCCTAGTAAGTTGTCTTTGAAGTCATTCCGAG
TCTCAGCGCGTGTGCCCCTCCCCGTTCACCTGCTAAGTGTGAGTCGCCAG
ATGAGCAACCACAAAGACAAACTCTCCATTCCCATCTCGTCCGCTCGCTC
CGAGAGCATTTTCCAAACCAACGCCGACCGCCGGACGGATTGATCTACGA
AAGAATTCGGTTTTATCAAGGAAAGCTGGGCCATCCGCCGGACGAACATG
CCGAGGCGGTGTGGTGGACCGTCCTCCGACACGACCCCAAGAGTAAGAAG
CATGTATATCTCCGGGCCTTTCTCCAACATCCCAGTTTACCTGCAGCATT
TGATGCCCTGCTCCTTATTCCGGGGCTTTGGGCCAAAATGCAACTGGGCG
TGCTGCATACCATGGTGTCACTGCGATGTGACGAGGTGAGTGGCCCAAGT
GTCTACGAGATGAAAGACTCTTCTAAGAACCCGTTATCTCTAGCCCATCC
TGTCCTACCTCGAAACCATCCGCACTGTCTGGATGGATCGTATTTTCGAC
GGGAGCAACACCCTTCCTGTTCACGCGGACGCAGAGACCGTTCACGCGCT
GGAATCTCAAGTCCCAAAGCTCTCGGAACCGGACCGGGAATATCTGCGAT
CTCGGATGATGGACGACCGGACGTTGTTTCCATCGATCGACGAGTCCGAC
ACACGGGCGGCATTGTGGGAGCGACTGAAGCAGATCGATACCCCTATTCC
CACCCTAGGGACGTTCTTCCAGGACCTCCGTTTCTTAGGTGTTGCCAGCA
AGGTGATGAAGGCTCTTCTTCTTCCACCAGAGGACCTGGGCTCGAAGAAG
GCCAAGAAGATCACTATCGACTGTGAACTCGGTACGCAGCATCGGGCCGA
TGGCAGCGTGTCATTAAGAGAGACAAGACTGCAAGTACGGCGGGGGTTGC
ACGAGCTCTGGCGCTTCAGCTTCCAATACGGGCTTGACATGACCGAGATT
GCACGTCGTCAGCCGCATAAGAGGAAGAAAGCGTGTAGCTCCTATCCTGT
CCCGAATTGCTCGACATCGGTTGACCGAATGGCGTTGTGGCGCCACTTCT
TCTGGCTGGCTGACCAACACGGATTTCGGATCCCGGCCATAGCCGAGTTT
ATGCCCGGACGAGTGACCCTGCCCACTCCGCAATCTCCGGAGGGCCTTGG
TAGCACCGAACAGGATGAAGCAGTGAATCGACGTTGCGGTATCCCATACG
CTGATACGGTCGATGCGGATCGCTTCGCCCTGGAAGGGGGCAGACTATGG
CAGCCCTGGGAGTCCCCACAGGTTTCCGCTGTGTTCTTCCGACGGTCGCA
GTTCCAGACCTTCTTTCGTTACCTTTGGGATAGGAGTGGAATCAATCAGG
CTACAAACGCCGAGGACGAATCGGCAGCGAGCGAGGAAGCCGCGGCGGTA
GATCCGGAGATCCCAGATTGTGATATTGAGCATCCGATGCCCTCGCCAAG
TCTCTCACAGCTGCCTGAAAGAAGCAATTCAATCGATTGGTTCATGGAAA
TGTGGGACTGCGGGTTGGGAGGGATGGCAATGCCCGCGGGCGATCTAGTC
GTGGTCGTCACCATCCCAAATCATGAACCAAGAAGACTTGCGCTGCCAAA
TGACGAATCACTAATCAACGAGCTTTTCCATGGTTTGAAGATGCGCAAGT
TCAGCCTCCACAGTACAGATCACCGCAATGTAACAGAAGAGGAAAATCTC
CACGTCTGGCATCTGAGGAACCCAGGCCAGAATGTTCTAGCCAGTTTGAC
CGAAGAGAATGTACAGGATTATACGACATCCGACGGGAATCGGCTTAAAA
GGAGGAGGAAGGGGCTGTCTGAGGCCATAACTGACATAGTTGCATGGGTG
GACGAGCAAATTTTCAGACTATCCACTCATGCTCTTACTTACAGTTGGAA
TGTACAAGAAGAGGAGGAGTATTGACTGGGCTGGGAAAGATTCAGTATGT
TTCTCTTGTATCCACAATGGGTAAACCATGGCGACAAGAAAGACATCCTG
GATCGATGGTGCAGTACTACAGCTTTAAGGCACTTCATATTATCATAGCG
CAAGGACTATTCTCGGATTGTAGTACGGGAGTATGAATCACGAGCTCTCG
TAGTACAATGTACCCCCCGGCTGGTAAAATGACATTTTCCGCAGTATACT
CTGAGTATGATTGGTTGTCTTGACGGTGGTCGGTCTTTCTCTACAATCGC
GAGCCTTGGCATTAATCCGAGTCATAACGCCCATGTTCCAG back to topCoding sequence (CDS) from alignment at JC12F:281965..284855- >KJC3_012957-T2 ID=KJC3_012957-T2|Name=KJC3_012957-T2|organism=Aspergillus niger KJC3|type=CDS|length=1443bp|location=Sequence derived from alignment at JC12F:281965..284855- (Aspergillus niger KJC3)
ATGGATCGTATTTTCGACGGGAGCAACACCCTTCCTGTTCACGCGGACGC
AGAGACCGTTCACGCGCTGGAATCTCAAGTCCCAAAGCTCTCGGAACCGG
ACCGGGAATATCTGCGATCTCGGATGATGGACGACCGGACGTTGTTTCCA
TCGATCGACGAGTCCGACACACGGGCGGCATTGTGGGAGCGACTGAAGCA
GATCGATACCCCTATTCCCACCCTAGGGACGTTCTTCCAGGACCTCCGTT
TCTTAGGTGTTGCCAGCAAGGTGATGAAGGCTCTTCTTCTTCCACCAGAG
GACCTGGGCTCGAAGAAGGCCAAGAAGATCACTATCGACTGTGAACTCGG
TACGCAGCATCGGGCCGATGGCAGCGTGTCATTAAGAGAGACAAGACTGC
AAGTACGGCGGGGGTTGCACGAGCTCTGGCGCTTCAGCTTCCAATACGGG
CTTGACATGACCGAGATTGCACGTCGTCAGCCGCATAAGAGGAAGAAAGC
GTGTAGCTCCTATCCTGTCCCGAATTGCTCGACATCGGTTGACCGAATGG
CGTTGTGGCGCCACTTCTTCTGGCTGGCTGACCAACACGGATTTCGGATC
CCGGCCATAGCCGAGTTTATGCCCGGACGAGTGACCCTGCCCACTCCGCA
ATCTCCGGAGGGCCTTGGTAGCACCGAACAGGATGAAGCAGTGAATCGAC
GTTGCGGTATCCCATACGCTGATACGGTCGATGCGGATCGCTTCGCCCTG
GAAGGGGGCAGACTATGGCAGCCCTGGGAGTCCCCACAGGTTTCCGCTGT
GTTCTTCCGACGGTCGCAGTTCCAGACCTTCTTTCGTTACCTTTGGGATA
GGAGTGGAATCAATCAGGCTACAAACGCCGAGGACGAATCGGCAGCGAGC
GAGGAAGCCGCGGCGGTAGATCCGGAGATCCCAGATTGTGATATTGAGCA
TCCGATGCCCTCGCCAAGTCTCTCACAGCTGCCTGAAAGAAGCAATTCAA
TCGATTGGTTCATGGAAATGTGGGACTGCGGGTTGGGAGGGATGGCAATG
CCCGCGGGCGATCTAGTCGTGGTCGTCACCATCCCAAATCATGAACCAAG
AAGACTTGCGCTGCCAAATGACGAATCACTAATCAACGAGCTTTTCCATG
GTTTGAAGATGCGCAAGTTCAGCCTCCACAGTACAGATCACCGCAATGTA
ACAGAAGAGGAAAATCTCCACGTCTGGCATCTGAGGAACCCAGGCCAGAA
TGTTCTAGCCAGTTTGACCGAAGAGAATGTACAGGATTATACGACATCCG
ACGGGAATCGGCTTAAAAGGAGGAGGAAGGGGCTGTCTGAGGCCATAACT
GACATAGTTGCATGGGTGGACGAGCAAATTTTCAGACTATCCACTCATGC
TCTTACTTACAGTTGGAATGTACAAGAAGAGGAGGAGTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012957-T2.utr3p1 | KJC3_012957-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022198 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| JC12F | supercontig | JC12F:281965..284855 - |
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