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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:175561..179537- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000183-T1 ID=KJC3_000183-T1|Name=KJC3_000183-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3977bp|location=Sequence derived from alignment at ch1:175561..179537- (Aspergillus niger KJC3)
CCCCCTCAATTTTACGACCGTCTCCCCAACGCTCGCTGCGACAGCCTTTG
TGGACTCCCATGGCGTCCAGCCCACTATTATGCCTAGCGCATCTCTTGTG
TATCTTCTCTATCGACTAAACGAAAAATAGCTGCTGCTATGGTCGCGCCA
TACAGTCTCGCTCTGGCCAACCCCCGCGCCCCCCCAGCGTCTCCGTTATC
CTCGTCCGACTTCTCGATGAGTTTGTCGCTCACCCTACATGTCTACAAAA
AAGTTATGTACGATGCCGTCTGCTGCTGGATCTGGACTACACTTCGAATC
ATTGCATAACGGCAATGTCTGACACCGTGGCGAGCGTGGCTACGCCTGCC
TTACCGCTTAGGGGCCGACTATGGTCGTGGTAGGCTTGGAGAGGGCTACA
TGGATCGAGCTGAAAGGACAATTAGGGGCCGGGGACGGGTGGCCTGGATT
GTTGTTGCCTTCGGCACGCTCATCCGGAATCCATGATTTCGCGAACGTTG
CCTGGCTGGCTTCATCCGTGGGGGTTCCCTCGGCCGGGAACACAACATCT
GTCCGGTAGAATGTGCCTGTCTCATGATAATACCACTGGTGTCGTATCCA
CCTCTCTGACGAGACGATGCGACAACGTCGGTGATCTCCGTGGATCGCGA
TGACGCACATTGGCCCATTACTTCTGCCTGAGTTGCTGTGATTCCTCCGT
ATCACGTCGCAGATTGGTCGGAGAAACTGGAGGTGTGGGACGGACGAGGC
GTGCTGGAGGGCTTTAACCCCATGGATGTTATCTATTCTGGTGAAATCGG
AGCTCTGAGCTCCCGGTGCGGTATTTTCTGCATTTCTCCTTAGCTAGCTG
AGGGGTTTATTTACACCTAGCATGTGATGACAACTTGCACGGCAAGCCAG
CAAAAGTCAAATCCCGAGTGGCCAGGGTCTGGCCGCGCTCTTTGCTTACA
TTTTCCTCTTTTGTCGGTTTAGTAATGATGCTTACCTGGCAATCGCAATC
TATGGAAGACGCAAGCGGCCGGAGCTTCCATATTGGGCGATTCAGGCGAC
CCAGTACAAAGCCTAACGTTGAATTGTTGAGGCCAGCGTACGGACACGGC
GTGCGACGGTCTCCGGTGATCCTCGAAACTAACTGTCATCTTCCCTTCCT
CCTTCCGTCTTCAGCGACCGCTTCACATTTTATGGATTTCGTTGAAAGCC
GAATCAGCGCCACTCCGGGTCACGACTTTGCTAAGCATTTTCCATTTACG
GCGATTGCAACGAGCGGCCCACTTCTGGTGAGGCAGTGACGCTGAGTGCC
TTTCTGGCCCCATTCCATGCTCAGTCAGACTGGTGACTGTACTTTTTGCC
GGGAGTGGCTCACGGAATCTGCTAATACCCTCTTCCGAGTCAGACGGTCG
CCCAGTCACTGTGACACCCTGTTCCCCCGGATCAGGCGCCCACAGAGCGT
CCAGGGTAGCTGGTTTTCGATTGGGTGAATAAGGGTAGCCGCTATCCCCC
TGTCAGTTTGCAGGACAACTACAATTTCCCCTTGAAAATTATTCGTCTTT
CTTTATACGTATACGGGTCCACTAGACCTGGACTGGTTCGCTTCATTAGC
GGACAATAGGTGTATCGGTGGTTGCTTGCTGTGTTGTTATAAATTGTCGG
ACCGCGGACCTTCCACCTTATGTTTTTTTCTTATCTTCTTGTCGCTTCGC
GTTCGCATTCTGGTACCCGTACGAATATTCTCTTCAACATGAGCACATTT
CTCTTCTATAAGCCAAATTCCAACCCTAATCGCTACTCTAGAAGCGAGCG
TTTCAGTGAACGTCACGCCGTATTAAGTTCAGACCATTCATTGAACCATC
GATGGAGTCCCTCGCAGAACGTGTCGGCTCTCCCTGAAAATATGCATTCC
AATGATGACAATAGGCATCACCTGAATACTCACCAGGCAGCCACAGGTTT
GTTCGCATAGCTAGAAGCATCTTCTATTTGCAACGCATTCATTCACTGAT
GTAAATGGCAGGCCGGTCAGCCTTTATGCAGGCAGATTCATTCCTGAGCT
CGAATACGAGTGACTCCTGCGGGGAATCGGTTCAGGATGACATAGAGTCG
TTACACAGCCTCTTTTCAGAACCGGCTACAGGCTCTCAGAGTGATTTCAG
CGAGGCACATGGAGTGGCTTCCACCGGAGGAGTTCTCACGCAATCCATTG
GAGATGTATTTCTAGCTGGTCCTTGCAATGACGAGAGATTTGTGGAAAAC
ACTCCTCATGAAATTCACTCAAACCATTCTTCTCTGGATTCGAGTAGCTG
TCATCAGCGCAGCAAGGGTGACAGCTCGCCCGGTGCAAAACCCGAAGCTT
CCCAACTTACGTGCGAGTCAGTCGACTTCGACAATGTCGCATATCTTCCA
AGTCCTCAGCCAATGGATACTTCTCTAGAAGGCTCTGTTACATTCTGTGC
CCCGACCCGGTCGCCTGCTCTGTCGACTGTTCTTGAAAAAGGGAGAAGAT
CTAGCATCTTAGAAACACAGGATGATGTCAAGCCATCTGAGCATACCTCT
AGCTATAGTAAGATGCTTTCGGAGAAGGACTCTCCAGAACCGCAGTTTGG
CTCTTTCCACCCAGGTAAGTTCTAAGGCGGCAGGCTATGTGGTCCCTACA
TTGCTAACAACTAAGTTCCCATGCAGGTGGCAAGACAGACGTACCGTGTT
GCACTTCTATTGCCGCAGACGCTCCGAAGTGCTTGGGAAGTGCTGCTATC
CCTCCATTGAGTGAAGGGCACGACCGGCAGCCCGATACGTGCACTGGAAC
AGCGTTACTGGCTAGTGTCGGCTCGCCTCAATTTCAACATACTCTTCATG
AGCTGGCCGAAGAGCCCCTTGACAATCCGCGTCATCCGGACGTTCATTAC
TCAGAGACGCCAGACTGTGTTGGTGCTCTTGGACCGGATACAGTACCAAA
TGATTGCGTGATCAACCTCGACGAGCTCGAGTCTTATCCACCCGTGTCTT
CGCCGCGGGAGTTTGGTGTGGACGCACAGGATCCCTTGCAGCACCTCAGC
GCGGAGCCCAAAAATTTTGAAGTGCTGTTAGCTGCTGTGCCTTCAGATCG
GCTTGGACCTGATACCCAATTCCAGACTAGGCAAGAGCTGAGTATAAATC
GCGCCGGCGACAGTGTCGTTCCCGTACATGCCACAGGACTCCAGTCAAAT
GATCCCAACGCTGCACGAAGAACTCCCAATTCCGCCAGCCTACGACCTTT
CCCGGAGGGGTATCTTGAGCTCGATTATGTAGAGGTTCCGCAATATCGCC
CCTTGGCGAAGACTAAATCTTCTGCTAAAACCTTGGCAACCACCACCAAT
CGTCCGACTCCAAGTTGTTCTCATTCCGAGGACACCAGTAGAGCATGGCG
CTTGGACGGTTCGTCTCTTTCCATTGACATCCAGAATGCAAGCTTTCCTA
TCGGCCTTGGAAAGTCCTCCTTTCATGTATTCGACGGCCAAATTATTCAG
ACTCTTACCATCGTCCATGGACCTGTGGAAGCATTTCCCTCTCAAGTGCC
AGCTCCAAGCACCAAGGGCAACAAGGAGAAGCGAATACCCACTGATTCTG
CAGCTCCTCTGTCCTCGGGGCAAAAGCAATATCTGCTGGATCTAAGGGAG
CAAGGTCTTACATGGAATGAGATCGTAGCTAAATTTCCCGGCAGAAAGAA
AGCAATGCTGCAGGCCATTTATTATACAAAGGTGAAGGAGCTCCGCAATC
CTACTTCTCGACGCCAGCGCCGTCGCAGGCGCCCAACATCCTCCACTCGA
AGCTCCCGGAACCGTTCTCGCACACAGGAAAACACCAGTCGTACTGCTGT
CCGTCTGGAGTATCGAACGGAGAATGAACTAAGATATTCACGATACAATC
TGCGGTCAAAAAGGGTACGGTAGACAAACGTAAGAATAACCTATTATAAT
TGGAGCAGACACAAAGCTTTTCATGAT back to topCoding sequence (CDS) from alignment at ch1:175561..179537- >KJC3_000183-T1 ID=KJC3_000183-T1|Name=KJC3_000183-T1|organism=Aspergillus niger KJC3|type=CDS|length=6381bp|location=Sequence derived from alignment at ch1:175561..179537- (Aspergillus niger KJC3)
GTGGCAAGACAGACGTACCGTGTTGCACTTCTATTGCCGCAGACGCTCCG
AAGTGCTTGGGAAGTGCTGCTATCCCTCCATTGAGTGAAGGGCACGACCG
GCAGCCCGATACGTGCACTGGAACAGCGTTACTGGCTAGTGTCGGCTCGC
CTCAATTTCAACATACTCTTCATGAGCTGGCCGAAGAGCCCCTTGACAAT
CCGCGTCATCCGGACGTTCATTACTCAGAGACGCCAGACTGTGTTGGTGC
TCTTGGACCGGATACAGTACCAAATGATTGCGTGATCAACCTCGACGAGC
TCGAGTCTTATCCACCCGTGTCTTCGCCGCGGGAGTTTGGTGTGGACGCA
CAGGATCCCTTGCAGCACCTCAGCGCGGAGCCCAAAAATTTTGAAGTGCT
GTTAGCTGCTGTGCCTTCAGATCGGCTTGGACCTGATACCCAATTCCAGA
CTAGGCAAGAGCTGAGTATAAATCGCGCCGGCGACAGTGTCGTTCCCGTA
CATGCCACAGGACTCCAGTCAAATGATCCCAACGCTGCACGAAGAACTCC
CAATTCCGCCAGCCTACGACCTTTCCCGGAGGGGTATCTTGAGCTCGATT
ATGTAGAGGTTCCGCAATATCGCCCCTTGGCGAAGACTAAATCTTCTGCT
AAAACCTTGGCAACCACCACCAATCGTCCGACTCCAAGTTGTTCTCATTC
CGAGGACACCAGTAGAGCATGGCGCTTGGACGGTTCGTCTCTTTCCATTG
ACATCCAGAATGCAAGCTTTCCTATCGGCCTTGGAAAGTCCTCCTTTCAT
GTATTCGACGGCCAAATTATTCAGACTCTTACCATCGTCCATGGACCTGT
GGAAGCATTTCCCTCTCAAGTGCCAGCTCCAAGCACCAAGGGCAACAAGG
AGAAGCGAATACCCACTGATTCTGCAGCTCCTCTGTCCTCGGGGCAAAAG
CAATATCTGCTGGATCTAAGGGAGCAAGGTCTTACATGGAATGAGATCGT
AGCTAAATTTCCCGGCAGAAAGAAAGCAATGCTGCAGGCCATTTATTATA
CAAAGGTGAAGGAGCTCCGCAATCCTACTTCTCGACGCCAGCGCCGTCGC
AGGCGCCCAACATCCTCCACTCGAAGCTCCCGGAACCGTTCTCGCACACA
GGAAAACACCAGTCGTACTGCTGTCCGTCTGGAGTATCGAACGGAGAATG
AACTAAGATATTCACGATACAATCTGCGGTCAAAAAGGGTACGGTAGGCC
GGTCAGCCTTTATGCAGGCAGATTCATTCCTGAGCTCGAATACGAGTGAC
TCCTGCGGGGAATCGGTTCAGGATGACATAGAGTCGTTACACAGCCTCTT
TTCAGAACCGGCTACAGGCTCTCAGAGTGATTTCAGCGAGGCACATGGAG
TGGCTTCCACCGGAGGAGTTCTCACGCAATCCATTGGAGATGTATTTCTA
GCTGGTCCTTGCAATGACGAGAGATTTGTGGAAAACACTCCTCATGAAAT
TCACTCAAACCATTCTTCTCTGGATTCGAGTAGCTGTCATCAGCGCAGCA
AGGGTGACAGCTCGCCCGGTGCAAAACCCGAAGCTTCCCAACTTACGTGC
GAGTCAGTCGACTTCGACAATGTCGCATATCTTCCAAGTCCTCAGCCAAT
GGATACTTCTCTAGAAGGCTCTGTTACATTCTGTGCCCCGACCCGGTCGC
CTGCTCTGTCGACTGTTCTTGAAAAAGGGAGAAGATCTAGCATCTTAGAA
ACACAGGATGATGTCAAGCCATCTGAGCATACCTCTAGCTATAGTAAGAT
GCTTTCGGAGAAGGACTCTCCAGAACCGCAGTTTGGCTCTTTCCACCCAG
ATGTTTTTTTCTTATCTTCTTGTCGCTTCGCGTTCGCATTCTGGTACCCG
TACGAATATTCTCTTCAACATGAGCACATTTCTCTTCTATAAGCCAAATT
CCAACCCTAATCGCTACTCTAGAAGCGAGCGTTTCAGTGAACGTCACGCC
GTATTAAGTTCAGACCATTCATTGAACCATCGATGGAGTCCCTCGCAGAA
CGTGTCGGCTCTCCCTGAAAATATGCATTCCAATGATGACAATAGGCATC
ACCTGAATACTCACCAGGCAGCCACAGGTGGCAAGACAGACGTACCGTGT
TGCACTTCTATTGCCGCAGACGCTCCGAAGTGCTTGGGAAGTGCTGCTAT
CCCTCCATTGAGTGAAGGGCACGACCGGCAGCCCGATACGTGCACTGGAA
CAGCGTTACTGGCTAGTGTCGGCTCGCCTCAATTTCAACATACTCTTCAT
GAGCTGGCCGAAGAGCCCCTTGACAATCCGCGTCATCCGGACGTTCATTA
CTCAGAGACGCCAGACTGTGTTGGTGCTCTTGGACCGGATACAGTACCAA
ATGATTGCGTGATCAACCTCGACGAGCTCGAGTCTTATCCACCCGTGTCT
TCGCCGCGGGAGTTTGGTGTGGACGCACAGGATCCCTTGCAGCACCTCAG
CGCGGAGCCCAAAAATTTTGAAGTGCTGTTAGCTGCTGTGCCTTCAGATC
GGCTTGGACCTGATACCCAATTCCAGACTAGGCAAGAGCTGAGTATAAAT
CGCGCCGGCGACAGTGTCGTTCCCGTACATGCCACAGGACTCCAGTCAAA
TGATCCCAACGCTGCACGAAGAACTCCCAATTCCGCCAGCCTACGACCTT
TCCCGGAGGGGTATCTTGAGCTCGATTATGTAGAGGTTCCGCAATATCGC
CCCTTGGCGAAGACTAAATCTTCTGCTAAAACCTTGGCAACCACCACCAA
TCGTCCGACTCCAAGTTGTTCTCATTCCGAGGACACCAGTAGAGCATGGC
GCTTGGACGGTTCGTCTCTTTCCATTGACATCCAGAATGCAAGCTTTCCT
ATCGGCCTTGGAAAGTCCTCCTTTCATGTATTCGACGGCCAAATTATTCA
GACTCTTACCATCGTCCATGGACCTGTGGAAGCATTTCCCTCTCAAGTGC
CAGCTCCAAGCACCAAGGGCAACAAGGAGAAGCGAATACCCACTGATTCT
GCAGCTCCTCTGTCCTCGGGGCAAAAGCAATATCTGCTGGATCTAAGGGA
GCAAGGTCTTACATGGAATGAGATCGTAGCTAAATTTCCCGGCAGAAAGA
AAGCAATGCTGCAGGCCATTTATTATACAAAGGTGAAGGAGCTCCGCAAT
CCTACTTCTCGACGCCAGCGCCGTCGCAGGCGCCCAACATCCTCCACTCG
AAGCTCCCGGAACCGTTCTCGCACACAGGAAAACACCAGTCGTACTGCTG
TCCGTCTGGAGTATCGAACGGAGAATGAACTAAGATATTCACGATACAAT
CTGCGGTCAAAAAGGGTACGGTAGGCCGGTCAGCCTTTATGCAGGCAGAT
TCATTCCTGAGCTCGAATACGAGTGACTCCTGCGGGGAATCGGTTCAGGA
TGACATAGAGTCGTTACACAGCCTCTTTTCAGAACCGGCTACAGGCTCTC
AGAGTGATTTCAGCGAGGCACATGGAGTGGCTTCCACCGGAGGAGTTCTC
ACGCAATCCATTGGAGATGTATTTCTAGCTGGTCCTTGCAATGACGAGAG
ATTTGTGGAAAACACTCCTCATGAAATTCACTCAAACCATTCTTCTCTGG
ATTCGAGTAGCTGTCATCAGCGCAGCAAGGGTGACAGCTCGCCCGGTGCA
AAACCCGAAGCTTCCCAACTTACGTGCGAGTCAGTCGACTTCGACAATGT
CGCATATCTTCCAAGTCCTCAGCCAATGGATACTTCTCTAGAAGGCTCTG
TTACATTCTGTGCCCCGACCCGGTCGCCTGCTCTGTCGACTGTTCTTGAA
AAAGGGAGAAGATCTAGCATCTTAGAAACACAGGATGATGTCAAGCCATC
TGAGCATACCTCTAGCTATAGTAAGATGCTTTCGGAGAAGGACTCTCCAG
AACCGCAGTTTGGCTCTTTCCACCCAGATGTTTTTTTCTTATCTTCTTGT
CGCTTCGCGTTCGCATTCTGGTACCCGTACGAATATTCTCTTCAACATGA
GCACATTTCTCTTCTATAAGCCAAATTCCAACCCTAATCGCTACTCTAGA
AGCGAGCGTTTCAGTGAACGTCACGCCGTATTAAGTTCAGACCATTCATT
GAACCATCGATGGAGTCCCTCGCAGAACGTGTCGGCTCTCCCTGAAAATA
TGCATTCCAATGATGACAATAGGCATCACCTGAATACTCACCAGGCAGCC
ACAGGTGGCAAGACAGACGTACCGTGTTGCACTTCTATTGCCGCAGACGC
TCCGAAGTGCTTGGGAAGTGCTGCTATCCCTCCATTGAGTGAAGGGCACG
ACCGGCAGCCCGATACGTGCACTGGAACAGCGTTACTGGCTAGTGTCGGC
TCGCCTCAATTTCAACATACTCTTCATGAGCTGGCCGAAGAGCCCCTTGA
CAATCCGCGTCATCCGGACGTTCATTACTCAGAGACGCCAGACTGTGTTG
GTGCTCTTGGACCGGATACAGTACCAAATGATTGCGTGATCAACCTCGAC
GAGCTCGAGTCTTATCCACCCGTGTCTTCGCCGCGGGAGTTTGGTGTGGA
CGCACAGGATCCCTTGCAGCACCTCAGCGCGGAGCCCAAAAATTTTGAAG
TGCTGTTAGCTGCTGTGCCTTCAGATCGGCTTGGACCTGATACCCAATTC
CAGACTAGGCAAGAGCTGAGTATAAATCGCGCCGGCGACAGTGTCGTTCC
CGTACATGCCACAGGACTCCAGTCAAATGATCCCAACGCTGCACGAAGAA
CTCCCAATTCCGCCAGCCTACGACCTTTCCCGGAGGGGTATCTTGAGCTC
GATTATGTAGAGGTTCCGCAATATCGCCCCTTGGCGAAGACTAAATCTTC
TGCTAAAACCTTGGCAACCACCACCAATCGTCCGACTCCAAGTTGTTCTC
ATTCCGAGGACACCAGTAGAGCATGGCGCTTGGACGGTTCGTCTCTTTCC
ATTGACATCCAGAATGCAAGCTTTCCTATCGGCCTTGGAAAGTCCTCCTT
TCATGTATTCGACGGCCAAATTATTCAGACTCTTACCATCGTCCATGGAC
CTGTGGAAGCATTTCCCTCTCAAGTGCCAGCTCCAAGCACCAAGGGCAAC
AAGGAGAAGCGAATACCCACTGATTCTGCAGCTCCTCTGTCCTCGGGGCA
AAAGCAATATCTGCTGGATCTAAGGGAGCAAGGTCTTACATGGAATGAGA
TCGTAGCTAAATTTCCCGGCAGAAAGAAAGCAATGCTGCAGGCCATTTAT
TATACAAAGGTGAAGGAGCTCCGCAATCCTACTTCTCGACGCCAGCGCCG
TCGCAGGCGCCCAACATCCTCCACTCGAAGCTCCCGGAACCGTTCTCGCA
CACAGGAAAACACCAGTCGTACTGCTGTCCGTCTGGAGTATCGAACGGAG
AATGAACTAAGATATTCACGATACAATCTGCGGTCAAAAAGGGTACGGTA
GGCCGGTCAGCCTTTATGCAGGCAGATTCATTCCTGAGCTCGAATACGAG
TGACTCCTGCGGGGAATCGGTTCAGGATGACATAGAGTCGTTACACAGCC
TCTTTTCAGAACCGGCTACAGGCTCTCAGAGTGATTTCAGCGAGGCACAT
GGAGTGGCTTCCACCGGAGGAGTTCTCACGCAATCCATTGGAGATGTATT
TCTAGCTGGTCCTTGCAATGACGAGAGATTTGTGGAAAACACTCCTCATG
AAATTCACTCAAACCATTCTTCTCTGGATTCGAGTAGCTGTCATCAGCGC
AGCAAGGGTGACAGCTCGCCCGGTGCAAAACCCGAAGCTTCCCAACTTAC
GTGCGAGTCAGTCGACTTCGACAATGTCGCATATCTTCCAAGTCCTCAGC
CAATGGATACTTCTCTAGAAGGCTCTGTTACATTCTGTGCCCCGACCCGG
TCGCCTGCTCTGTCGACTGTTCTTGAAAAAGGGAGAAGATCTAGCATCTT
AGAAACACAGGATGATGTCAAGCCATCTGAGCATACCTCTAGCTATAGTA
AGATGCTTTCGGAGAAGGACTCTCCAGAACCGCAGTTTGGCTCTTTCCAC
CCAGATGTTTTTTTCTTATCTTCTTGTCGCTTCGCGTTCGCATTCTGGTA
CCCGTACGAATATTCTCTTCAACATGAGCACATTTCTCTTCTATAAGCCA
AATTCCAACCCTAATCGCTACTCTAGAAGCGAGCGTTTCAGTGAACGTCA
CGCCGTATTAAGTTCAGACCATTCATTGAACCATCGATGGAGTCCCTCGC
AGAACGTGTCGGCTCTCCCTGAAAATATGCATTCCAATGATGACAATAGG
CATCACCTGAATACTCACCAGGCAGCCACAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000183-T1.utr3p1 | KJC3_000183-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000183-T1.utr5p1 | KJC3_000183-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:175561..179537 - |
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