You are here

Home

KJC3_000377-T1, KJC3_000377-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000377-T1
Unique NameKJC3_000377-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:687907..689412-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000377-T1 ID=KJC3_000377-T1|Name=KJC3_000377-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1506bp|location=Sequence derived from alignment at ch1:687907..689412- (Aspergillus niger KJC3)
AAAGGTCACTGGGCCGAAACGATTGCACTGGACAAATAATGAGAATATCT
AAATACATGGCTAGCATGATTTTCTAATGGCTGATAAGTTCAGTTTTCTC
TCAATAAATCACTGGCACCCTCTTCATCATTTCCCAGGCTTTGCCACTCA
CCAGCAACATAGCAAACACAACCATACAGACCCCGAACATGAGCGAGCAA
TACCTTGGCCTGCCTATTGCCCCAGCAGATACAGCCTTTGGGTTAATGGC
AGAATACGATGCAGACCAGCACCCAGACAAAGTATCCCTGATAGCAGGGG
CCTACCGCGACCAGAACGGCCAACCCTGGGTACTTCCCAGCGTGAGAGAG
GTTCGCTAATACTGTCAGGACTATATTTTGACTATCATAAAGCTAACTCT
TAGGGCTAGGCAAAAGCGCTCCTCGCTCGAAATCAAAACCACGAATATCT
CGGCATCGCAGGCTCCCCAGCCCTAATTAGCCTGGCCCAGTCCCTTACAT
TCGGATCTGAGATCACCGCAAAACTTGAAAAGAGCATCGCTTCCATCCAA
AGCGTCTCAGGAACAGGCGCAAACCACATGGCTGCGCACTTCCTAGCACA
TCATCTTCGCCCAAAGCGGGTATTCATACCCTCGCCGACATGGATCAATC
ATAAGACTATCTGGGCCAACGTCGGGGTCCCTATCGCAGAGTATCCATAC
TACTCCACAAAAACCAGAGGAGTGGATCTGGAAGGGATGCTCTCAGTGTT
TGAAACAACAGCCGGGGAGAGAGATGTAGTGATCCTGCAAGCCTGTGCAC
ATAACCCGACAGGTGTGGATCTCACTCACGAGCAATGGGCACAAGTAGCG
GAGGTAATGAAGCGGAAGAAACTATACGTTGTGTTTGACAGCGCATACCA
AGGATTTGCTACAGGCGACGTGGATGGTGATGCCTGGTCGATTCGGTTTT
TCGTGGAGCAACTGATCTTGAATGGACAGCCTGACTATCCAGGCCTCTGC
GTGGCTCAGTCTTTTTCTAAAAATTTCGGACTCTATGGCGAGCGGGTAGG
TGCTCTCCACCTTGTCGTGCCACGGCATCTTGGAGCTCAGGGTGCCCGCT
CGGAGTTGGTTGCTCTCGCTCGCGCCGAGTACTCCAATCCCCCTCGCTTC
GGGGCGAGTATTGTCGAGGCTGTCCTGGGGAATGAGAAGTTGAAAGGTCA
ATGGTTGAGAGATTTGGATACTATGAGTTCGAGAATCAAGAACATGCGGC
GTGAGCTTCGCAGGAGGTTGGAAAGCAAGGAGACGCCCGGGGATTGGTCA
GTTTTAGAGAGCCAGATTGGTATGTTTAGCTACACGGCGCTGGATCAGGA
ACAGGTCACTCGTTTGCGGGAGAAGTTTCATATCTATCTCCTGCCTTCCG
GGAGAGTGAGTATCTGTGGGCTGAACGAGAAGAATATTGAGTATGTGGCG
AGTGCATTTGGTGAGGTGATCGAATTCAATTCTAGCTGAACTTATTTCTT
TAATAG
back to top

Coding sequence (CDS) from alignment at ch1:687907..689412-

>KJC3_000377-T1 ID=KJC3_000377-T1|Name=KJC3_000377-T1|organism=Aspergillus niger KJC3|type=CDS|length=2484bp|location=Sequence derived from alignment at ch1:687907..689412- (Aspergillus niger KJC3)
GCAAAAGCGCTCCTCGCTCGAAATCAAAACCACGAATATCTCGGCATCGC
AGGCTCCCCAGCCCTAATTAGCCTGGCCCAGTCCCTTACATTCGGATCTG
AGATCACCGCAAAACTTGAAAAGAGCATCGCTTCCATCCAAAGCGTCTCA
GGAACAGGCGCAAACCACATGGCTGCGCACTTCCTAGCACATCATCTTCG
CCCAAAGCGGGTATTCATACCCTCGCCGACATGGATCAATCATAAGACTA
TCTGGGCCAACGTCGGGGTCCCTATCGCAGAGTATCCATACTACTCCACA
AAAACCAGAGGAGTGGATCTGGAAGGGATGCTCTCAGTGTTTGAAACAAC
AGCCGGGGAGAGAGATGTAGTGATCCTGCAAGCCTGTGCACATAACCCGA
CAGGTGTGGATCTCACTCACGAGCAATGGGCACAAGTAGCGGAGGTAATG
AAGCGGAAGAAACTATACGTTGTGTTTGACAGCGCATACCAAGGATTTGC
TACAGGCGACGTGGATGGTGATGCCTGGTCGATTCGGTTTTTCGTGGAGC
AACTGATCTTGAATGGACAGCCTGACTATCCAGGCCTCTGCGTGGCTCAG
TCTTTTTCTAAAAATTTCGGACTCTATGGCGAGCGGGTAGGTGCTCTCCA
CCTTGTCGTGCCACGGCATCTTGGAGCTCAGGGTGCCCGCTCGGAGTTGG
TTGCTCTCGCTCGCGCCGAGTACTCCAATCCCCCTCGCTTCGGGGCGAGT
ATTGTCGAGGCTGTCCTGGGGAATGAGAAGTTGAAAGGTCAATGGTTGAG
AGATTTGGATACTATGAGTTCGAGAATCAAGAACATGCGGCGTGAGCTTC
GCAGGAGGTTGGAAAGCAAGGAGACGCCCGGGGATTGGTCAGTTTTAGAG
AGCCAGATTGGTATGTTTAGCTACACGGCGCTGGATCAGGAACAGGTCAC
TCGTTTGCGGGAGAAGTTTCATATCTATCTCCTGCCTTCCGGGAGAGTGA
GTATCTGTGGGCTGAACGAGAAGAATATTGAGTATGTGGCGAGTGCATTT
GGTGAGGTGATCGAATTCAATTCTAGCTGAATGAGCGAGCAATACCTTGG
CCTGCCTATTGCCCCAGCAGATACAGCCTTTGGGTTAATGGCAGAATACG
ATGCAGACCAGCACCCAGACAAAGTATCCCTGATAGCAGGGGCCTACCGC
GACCAGAACGGCCAACCCTGGGTACTTCCCAGCGTGAGAGAGGCAAAAGC
GCTCCTCGCTCGAAATCAAAACCACGAATATCTCGGCATCGCAGGCTCCC
CAGCCCTAATTAGCCTGGCCCAGTCCCTTACATTCGGATCTGAGATCACC
GCAAAACTTGAAAAGAGCATCGCTTCCATCCAAAGCGTCTCAGGAACAGG
CGCAAACCACATGGCTGCGCACTTCCTAGCACATCATCTTCGCCCAAAGC
GGGTATTCATACCCTCGCCGACATGGATCAATCATAAGACTATCTGGGCC
AACGTCGGGGTCCCTATCGCAGAGTATCCATACTACTCCACAAAAACCAG
AGGAGTGGATCTGGAAGGGATGCTCTCAGTGTTTGAAACAACAGCCGGGG
AGAGAGATGTAGTGATCCTGCAAGCCTGTGCACATAACCCGACAGGTGTG
GATCTCACTCACGAGCAATGGGCACAAGTAGCGGAGGTAATGAAGCGGAA
GAAACTATACGTTGTGTTTGACAGCGCATACCAAGGATTTGCTACAGGCG
ACGTGGATGGTGATGCCTGGTCGATTCGGTTTTTCGTGGAGCAACTGATC
TTGAATGGACAGCCTGACTATCCAGGCCTCTGCGTGGCTCAGTCTTTTTC
TAAAAATTTCGGACTCTATGGCGAGCGGGTAGGTGCTCTCCACCTTGTCG
TGCCACGGCATCTTGGAGCTCAGGGTGCCCGCTCGGAGTTGGTTGCTCTC
GCTCGCGCCGAGTACTCCAATCCCCCTCGCTTCGGGGCGAGTATTGTCGA
GGCTGTCCTGGGGAATGAGAAGTTGAAAGGTCAATGGTTGAGAGATTTGG
ATACTATGAGTTCGAGAATCAAGAACATGCGGCGTGAGCTTCGCAGGAGG
TTGGAAAGCAAGGAGACGCCCGGGGATTGGTCAGTTTTAGAGAGCCAGAT
TGGTATGTTTAGCTACACGGCGCTGGATCAGGAACAGGTCACTCGTTTGC
GGGAGAAGTTTCATATCTATCTCCTGCCTTCCGGGAGAGTGAGTATCTGT
GGGCTGAACGAGAAGAATATTGAGTATGTGGCGAGTGCATTTGGTGAGGT
GATCGAATTCAATTCTAGCTGAATGAGCGAGCAATACCTTGGCCTGCCTA
TTGCCCCAGCAGATACAGCCTTTGGGTTAATGGCAGAATACGATGCAGAC
CAGCACCCAGACAAAGTATCCCTGATAGCAGGGGCCTACCGCGACCAGAA
CGGCCAACCCTGGGTACTTCCCAGCGTGAGAGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006520cellular amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
GO:0008483transaminase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000377KJC3_000377Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000377-T1KJC3_000377-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000377-T1.cdsKJC3_000377-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000377-T1.utr3p1KJC3_000377-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000377-T1.exon2KJC3_000377-T1.exon2Aspergillus niger KJC3exon
KJC3_000377-T1.exon1KJC3_000377-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000377-T1.utr5p1KJC3_000377-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR004838
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR004839
DBxrefInterPro:IPR000796
DBxrefPFAM:PF00155
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:687907..689412 -
Powered by Drupal