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KJC3_000388-T1, KJC3_000388-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000388-T1
Unique NameKJC3_000388-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:711555..713205-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000388-T1 ID=KJC3_000388-T1|Name=KJC3_000388-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1651bp|location=Sequence derived from alignment at ch1:711555..713205- (Aspergillus niger KJC3)
GAGTCTTAGCATGCGAATACCTCGCAACAATGAATGATTTTGAAAGACTA
CGTCCAGTCGGTGAGTGAGATTTGCTTGAATTGAGAAGCCAAGGCCGACG
GGGACTTGAATTGACAGCTGTCAGGGCCCCTGGAGAAATACTCCACCGCA
CGCCATTCACTCGGACTATATTTCAACGTCGCGGTGTCGGCAACCTACAT
CTTGCCAGACACCTTCACTCTGCCATTAAAAGACTATGTGTATAAGGCAT
GTGAAACATTGATCGGCCAGCATCCTATCCTGTCCGCCATCCCCGTCAAT
GAAGATACCGAAGATACCTGGTTCGTGCGCCTCCCGGAGATTGACCTGAG
CCAGTCGGTGGCATTTCAGAGGCGCACCCGCGACTTCCCCAACGACGATG
AACCGGATGTAGAATTGTGCGAATTGTTGCAAGTTCAACATAGCACGGGG
TTTACGGCTCCTTTGCCGTTCTGGAGACTTTACATCCTAACGGATGAGGC
GTATGACCGGCGCTTTACGGCAGTCTATGTGTTCCACCATGCGATTGGGG
ACGGAACATCAGGGAAGGCTTTTCACCAGACGTTCCTAGATGCATTACAC
GCTGCTTCATCCTTGACCCCAGGCGAGGTTAACCAAGTCATCCCGTCACC
CAAATCACCGCTGCTGCCAAACCTGGAAGCCCTCCATCCATGTCCTACGA
CCATCCCTTTTCTTCTTAATGCTCTCTTTAGGGCAAAAGTATGGTCTCCT
CGCGATTCCCGCCTCTGGACAGGCGCCAAAATATCTGCTCCGATTGAGAC
TAAGCTACGCCAAATTGTCATTCCGGCCGCTGTGTCTGCGGCGCTTAGAA
AGAACTGTCGCCAAAACAATGCTACTGTCACCTCTGCTCTGCAAGCAGCA
GTTGCCCGCGCCCTTTTCACCCACCTGCCAGAGAAGTATACCAGAGTTCA
AATGAATGGCGCACTGTCATGTCGAAGGTGGCTAAAGGGAGGAGAGGTTA
CAGATCAGTCCATGGGCGTTTGGGTCATGGACTTTGGGGAAAGCTTTTAT
CGAAACCAGGTGAATCAATATCCTGACACCTTCCCATGGGGTCAAGCCAG
GAAGTCCCGCACGACGATCGAACAGGCACTGGGTCGCGAAGGAAAGAACG
CCGGCGTATGTTTGCTCAAATATATAGATAATTTTCAGGATCTCTTTGGG
GGTAAGATCGGCAAAGACCGAAATGAAAGCTTTGAAGTGTCAAATGTGGG
AATCTTGCAGCCCAAACAGGCAGAAGACCCGTCGCGGCCGCAGATTAAAC
GGGCGATGTTCTCCCAGACACCCAGTGCTTTAGGTGCAGCCCTGCACGTC
TCGTCAATCACCGGTGGTGATGGCTGTTTGATTTTGGGAATCACATGGCA
GACAGGCATTGCGGAGCCAGAGCTGGTCAATGCGGTCATTGACACCCTAA
TTCAGCAGCTACACAATGCTGCGCGGTGATTTAGCGCTGAGCCAATGTAG
GCAGTCATCGCCCGACAATCTGCTTTGGTGGCCTCTTCCTACAGCTTCAT
CTCCTCACCTTGTCTCCGGAGATCCTAAACATCTTATTCGATTATGTGCA
TGATCATCTTCTGGCCTTCTCTATGTTCAATTTTATACCTCTAATACCTC
T
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Coding sequence (CDS) from alignment at ch1:711555..713205-

>KJC3_000388-T1 ID=KJC3_000388-T1|Name=KJC3_000388-T1|organism=Aspergillus niger KJC3|type=CDS|length=2772bp|location=Sequence derived from alignment at ch1:711555..713205- (Aspergillus niger KJC3)
GGCCCCTGGAGAAATACTCCACCGCACGCCATTCACTCGGACTATATTTC
AACGTCGCGGTGTCGGCAACCTACATCTTGCCAGACACCTTCACTCTGCC
ATTAAAAGACTATGTGTATAAGGCATGTGAAACATTGATCGGCCAGCATC
CTATCCTGTCCGCCATCCCCGTCAATGAAGATACCGAAGATACCTGGTTC
GTGCGCCTCCCGGAGATTGACCTGAGCCAGTCGGTGGCATTTCAGAGGCG
CACCCGCGACTTCCCCAACGACGATGAACCGGATGTAGAATTGTGCGAAT
TGTTGCAAGTTCAACATAGCACGGGGTTTACGGCTCCTTTGCCGTTCTGG
AGACTTTACATCCTAACGGATGAGGCGTATGACCGGCGCTTTACGGCAGT
CTATGTGTTCCACCATGCGATTGGGGACGGAACATCAGGGAAGGCTTTTC
ACCAGACGTTCCTAGATGCATTACACGCTGCTTCATCCTTGACCCCAGGC
GAGGTTAACCAAGTCATCCCGTCACCCAAATCACCGCTGCTGCCAAACCT
GGAAGCCCTCCATCCATGTCCTACGACCATCCCTTTTCTTCTTAATGCTC
TCTTTAGGGCAAAAGTATGGTCTCCTCGCGATTCCCGCCTCTGGACAGGC
GCCAAAATATCTGCTCCGATTGAGACTAAGCTACGCCAAATTGTCATTCC
GGCCGCTGTGTCTGCGGCGCTTAGAAAGAACTGTCGCCAAAACAATGCTA
CTGTCACCTCTGCTCTGCAAGCAGCAGTTGCCCGCGCCCTTTTCACCCAC
CTGCCAGAGAAGTATACCAGAGTTCAAATGAATGGCGCACTGTCATGTCG
AAGGTGGCTAAAGGGAGGAGAGGTTACAGATCAGTCCATGGGCGTTTGGG
TCATGGACTTTGGGGAAAGCTTTTATCGAAACCAGGTGAATCAATATCCT
GACACCTTCCCATGGGGTCAAGCCAGGAAGTCCCGCACGACGATCGAACA
GGCACTGGGTCGCGAAGGAAAGAACGCCGGCGTATGTTTGCTCAAATATA
TAGATAATTTTCAGGATCTCTTTGGGGGTAAGATCGGCAAAGACCGAAAT
GAAAGCTTTGAAGTGTCAAATGTGGGAATCTTGCAGCCCAAACAGGCAGA
AGACCCGTCGCGGCCGCAGATTAAACGGGCGATGTTCTCCCAGACACCCA
GTGCTTTAGGTGCAGCCCTGCACGTCTCGTCAATCACCGGTGGTGATGGC
TGTTTGATTTTGGGAATCACATGGCAGACAGGCATTGCGGAGCCAGAGCT
GGTCAATGCGGTCATTGACACCCTAATTCAGCAGCTACACAATGCTGCGC
GGTGAATGAATGATTTTGAAAGACTACGTCCAGTCGGGCCCCTGGAGAAA
TACTCCACCGCACGCCATTCACTCGGACTATATTTCAACGTCGCGGTGTC
GGCAACCTACATCTTGCCAGACACCTTCACTCTGCCATTAAAAGACTATG
TGTATAAGGCATGTGAAACATTGATCGGCCAGCATCCTATCCTGTCCGCC
ATCCCCGTCAATGAAGATACCGAAGATACCTGGTTCGTGCGCCTCCCGGA
GATTGACCTGAGCCAGTCGGTGGCATTTCAGAGGCGCACCCGCGACTTCC
CCAACGACGATGAACCGGATGTAGAATTGTGCGAATTGTTGCAAGTTCAA
CATAGCACGGGGTTTACGGCTCCTTTGCCGTTCTGGAGACTTTACATCCT
AACGGATGAGGCGTATGACCGGCGCTTTACGGCAGTCTATGTGTTCCACC
ATGCGATTGGGGACGGAACATCAGGGAAGGCTTTTCACCAGACGTTCCTA
GATGCATTACACGCTGCTTCATCCTTGACCCCAGGCGAGGTTAACCAAGT
CATCCCGTCACCCAAATCACCGCTGCTGCCAAACCTGGAAGCCCTCCATC
CATGTCCTACGACCATCCCTTTTCTTCTTAATGCTCTCTTTAGGGCAAAA
GTATGGTCTCCTCGCGATTCCCGCCTCTGGACAGGCGCCAAAATATCTGC
TCCGATTGAGACTAAGCTACGCCAAATTGTCATTCCGGCCGCTGTGTCTG
CGGCGCTTAGAAAGAACTGTCGCCAAAACAATGCTACTGTCACCTCTGCT
CTGCAAGCAGCAGTTGCCCGCGCCCTTTTCACCCACCTGCCAGAGAAGTA
TACCAGAGTTCAAATGAATGGCGCACTGTCATGTCGAAGGTGGCTAAAGG
GAGGAGAGGTTACAGATCAGTCCATGGGCGTTTGGGTCATGGACTTTGGG
GAAAGCTTTTATCGAAACCAGGTGAATCAATATCCTGACACCTTCCCATG
GGGTCAAGCCAGGAAGTCCCGCACGACGATCGAACAGGCACTGGGTCGCG
AAGGAAAGAACGCCGGCGTATGTTTGCTCAAATATATAGATAATTTTCAG
GATCTCTTTGGGGGTAAGATCGGCAAAGACCGAAATGAAAGCTTTGAAGT
GTCAAATGTGGGAATCTTGCAGCCCAAACAGGCAGAAGACCCGTCGCGGC
CGCAGATTAAACGGGCGATGTTCTCCCAGACACCCAGTGCTTTAGGTGCA
GCCCTGCACGTCTCGTCAATCACCGGTGGTGATGGCTGTTTGATTTTGGG
AATCACATGGCAGACAGGCATTGCGGAGCCAGAGCTGGTCAATGCGGTCA
TTGACACCCTAATTCAGCAGCTACACAATGCTGCGCGGTGAATGAATGAT
TTTGAAAGACTACGTCCAGTCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000388KJC3_000388Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000388-T1KJC3_000388-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000388-T1.cdsKJC3_000388-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000388-T1.utr3p1KJC3_000388-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000388-T1.exon2KJC3_000388-T1.exon2Aspergillus niger KJC3exon
KJC3_000388-T1.exon1KJC3_000388-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000388-T1.utr5p1KJC3_000388-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023213
DBxrefInterPro:IPR010828
DBxrefPFAM:PF07247
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:711555..713205 -
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