|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1064952..1068141- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000514-T1 ID=KJC3_000514-T1|Name=KJC3_000514-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3190bp|location=Sequence derived from alignment at ch1:1064952..1068141- (Aspergillus niger KJC3)
GGAAGAAAAGTGGATGGAGCGGAAGCGTTCGCGTTCGCCGGCGCCGCGAT
CCATCTACCAGTTATCGTCGCAACGGGCCAGCCCGCGGTAGTTTTGACAT
TCTATCAACTCCTACAGGACTACTACTTAAACACTTTTATACCGGAAAAT
GTCGGACTTTGTCACATTCATTTGGAGATTTACAATTGTGTCAAATGGCT
GCTAACTTCGGAGGAGGCCTTCTTGGGGAGGTCCATGAGGAGAGACTCGA
CGAGGTATGTATGGGTCGGTGTTTCAGTTCACTGCATGATTCCGCATCAT
ATCTTTAATTTTCTTTGTGCATACTGCTCTCAGAATTCGCTGGAAGGCCT
GCTAATTTGGAGAAGCTTCTGCATGACCTAAGAAACATATCACATGGGAT
TGTCAATAGTAACGCCTTGAGGCCCAGACTGGGTGTTCAGGTGCTTGATG
ATCTTCTGGGTGTCTTTACAACACCCGTCCCTGCTGCACAAGACATGCAT
CTGGAAGGGCATATGCCGCAGGACCATTCCGGGGATGCTCAGGGAGCTTA
CATGGATGATCCTGAGGGCGAACACCCAGCTCACGGCGAACTTATCAACG
ATGAGCATGCAGGCATGCATGGTCTGCCGATGGTGGTACCAAACCACGCA
GAGCCAGTCCTGGAGATCTCGAGCAGGCTTTCTGCAGCCGGAAAGTCGCA
TCTCCTGTACTATCTCGCTGCAGTTGCTATTTTACCATCTTTGTTCCATG
GTATCCCGCTCGGTGGGCATGAATCGGCAGTGGTATTCATTGACACGGAC
GGCCGTTTTGATGCTGAGCGGCTTAGAACAGTGCTGAGAGGGATCGTGCA
CGCCAATATTAACGCACTGGCCCAGGGATCGCCTGGATGGACGTCTGAGG
TTGGAAATGAGGAAATTGAAAGTATGCTTGTCGTCAGTTTGCAACATGTC
CACGTCTTCCGCCCACAATCGTCATCTGCTCTCCTTGCTACACTTCACCA
TCTGGATGCATACATACTTGATCTATCTCGCCATTTATCTTCCACTCGAC
CGGTGCATACTATCTATATTGATAGTGCCACTGCTTTCTTATGGCAGGAT
AAATTGCAGGACGAAATTGCCCGAGTGGAAGATATCGGGCACGTCCATGC
TGACCCGGAGCATGAGCGTACTCAGAAACAACGGTTCCAGATCTCAGATC
TCTATGCTGCCTTTATAGCAAAATTGAAACGACTACAGCGACTTTTAGGT
TGCATGGTGGTTTACACCACTACGGTTCAGGGAAGATTCCCCGGTGCTCG
TGGTGGTAACCCAGCGTATACACCATCAGGACCCTACGATCTGTATACCC
CAGGTCCTTCTGTGCCAAAGGCGCCTTCTTTTGGGCCTGCTCTTCCAGCC
CCTTGGGGTAGATTTCCTACTCTGCGAGTTGTTGTTCAACGGGATGCAGT
TCGCCCCTTTCCGCCTACCATGACTGCGCAGAATGCGCAGCGCGGAGCGC
CTCGTCGACAAGAAATTGTCAGTCGCGGAAGGTTTTCCGGATGGGTGAAT
GAATGGAGACGCGAGGAATGGCCTCGTCGGGTGCTGGAGGGCTTGAAACG
AAGTAATGGCGGCAAATTCGCCTTTCGCATAGGAGGAGACGGGGTCGACA
TTGGCTGATGAATTTCTCATCTAGCTATGTACACTGTACAGGCGTGATTG
AGACCGTGTCCCGCAGCAGATTCTAAATGCTTTCTTAGCTGAACAACTTT
CCAATGGCCTCAACCGTGGTGTTTCCACCGCTAAACACAATGCCCACATC
CCAGCCCTCAGGAGCCTCCTTTTCGACCAGTCGTCGGAACTCCTCGTTGT
ACAGACAAACGGCCAAACCCACCACAGCGCTTGGCTCTACTACTACCTTC
ATGCGTTCCAGAACCAGACGCATGGCCGCCTTGATCTGCTCCTCCGTCAC
AGCATATACACCAGCGACCTTGTTCCGGTTCGAGATCACCTCCCAGTTCA
ACAAGCCAACCGGTGTCCGCAACCCGTCCGCGATGGTCAGTGTGGACACT
GCCGGAACCCGCTCCCCGGCATCCAGTCCGCGCCGGCAATCGTCTGCACC
CTCGAAACTGGGTTCCGCACCAAACACCTTAGTTGTCTTGTCCGAGAAGA
AGGTTGCAACACCGGAATTGAGACCGCCCCCACCGATGGGTGTGAAGACA
GCATCGAGAGCCGTGGAACCCTGGCGGATGCTCAGGTTGGGCTTCTCAGC
AACCAGCTCCCGGTACTGCTCCTCAAGTTCGAGGGCGGTGGTACCCTGGC
CGCAGATGATATTGAAGTCATCATAGGGTGGGATCAGAATTGCACCGGTC
TTGGCCTGCACATCCGCGACGACGGCCTCGCGCTCGACGCTCGTGGACCC
ACTGAAAATTACCTCCGCGCCGTGGGAGCGCGTCCCAGCGATCTTAGAAG
GGGTGCTAATACTGGGCATGATAATGTAGGCGGGAACACCGAGAGTGGAG
GCGGCCAGAGCGAGAGCCTGTGCGTGATTTCCTACATGAATAGATGAATA
TTGCGTGGTTCCCTTCAAGTTGCATCTTGTTGCTTGGCGAGAGTGATGAC
CTACCAGAACTGTGTGTAATAACACCCCTTTTCTGCACATCCTCCTGACC
CCGTTCGGCGATGAGTCGTAGCAGAGCGTGGAAGGCGCCCCGGGCCTTGA
AAGCACCTATCCGTTGGTAGTTTTCACATTTGAAGAAGAAACGGAACTTG
GGATTGGCAGGAGTTTGGCCCTCGGAGGAGGTGCCGCTCAATGCCTCTGG
AGATTGTGGCGCTGAGGCAATGGTGTTGAGGGTTTGACAAGTGAGGAGAG
GCGTGCGGTGCACATAGGGTTGGATGAGGGAGTAGGCCTCATGGATGGCT
GAAGGGGTCAAAGATTGCACGAGCACCGAAGGGTCTGTCATTTTGAGAGA
TTCAGTCGTGTATAGACTGATTCGTACCAGTAGTTTGAGGGTTTTCTACA
GTGGTACTCTCCAAGAGTTGCGGAGAAAGGACAGAGGGGAAATGGCCGGT
TGATAAGCGGCATCCGAGTCGGCGAAGGGATATATCTCCGCCATCGGACC
CCCGCATTGCGCCAACGCAGTTGAGAGTGGGAGAATGCAAGGAGATGAGG
TTTCAGAACTCTAGCTGAGGTCAAGGCTTTAATTGAACCG back to topCoding sequence (CDS) from alignment at ch1:1064952..1068141- >KJC3_000514-T1 ID=KJC3_000514-T1|Name=KJC3_000514-T1|organism=Aspergillus niger KJC3|type=CDS|length=2706bp|location=Sequence derived from alignment at ch1:1064952..1068141- (Aspergillus niger KJC3)
CTTCTGCATGACCTAAGAAACATATCACATGGGATTGTCAATAGTAACGC
CTTGAGGCCCAGACTGGGTGTTCAGGTGCTTGATGATCTTCTGGGTGTCT
TTACAACACCCGTCCCTGCTGCACAAGACATGCATCTGGAAGGGCATATG
CCGCAGGACCATTCCGGGGATGCTCAGGGAGCTTACATGGATGATCCTGA
GGGCGAACACCCAGCTCACGGCGAACTTATCAACGATGAGCATGCAGGCA
TGCATGGTCTGCCGATGGTGGTACCAAACCACGCAGAGCCAGTCCTGGAG
ATCTCGAGCAGGCTTTCTGCAGCCGGAAAGTCGCATCTCCTGTACTATCT
CGCTGCAGTTGCTATTTTACCATCTTTGTTCCATGGTATCCCGCTCGGTG
GGCATGAATCGGCAGTGGTATTCATTGACACGGACGGCCGTTTTGATGCT
GAGCGGCTTAGAACAGTGCTGAGAGGGATCGTGCACGCCAATATTAACGC
ACTGGCCCAGGGATCGCCTGGATGGACGTCTGAGGTTGGAAATGAGGAAA
TTGAAAGTATGCTTGTCGTCAGTTTGCAACATGTCCACGTCTTCCGCCCA
CAATCGTCATCTGCTCTCCTTGCTACACTTCACCATCTGGATGCATACAT
ACTTGATCTATCTCGCCATTTATCTTCCACTCGACCGGTGCATACTATCT
ATATTGATAGTGCCACTGCTTTCTTATGGCAGGATAAATTGCAGGACGAA
ATTGCCCGAGTGGAAGATATCGGGCACGTCCATGCTGACCCGGAGCATGA
GCGTACTCAGAAACAACGGTTCCAGATCTCAGATCTCTATGCTGCCTTTA
TAGCAAAATTGAAACGACTACAGCGACTTTTAGGTTGCATGGTGGTTTAC
ACCACTACGGTTCAGGGAAGATTCCCCGGTGCTCGTGGTGGTAACCCAGC
GTATACACCATCAGGACCCTACGATCTGTATACCCCAGGTCCTTCTGTGC
CAAAGGCGCCTTCTTTTGGGCCTGCTCTTCCAGCCCCTTGGGGTAGATTT
CCTACTCTGCGAGTTGTTGTTCAACGGGATGCAGTTCGCCCCTTTCCGCC
TACCATGACTGCGCAGAATGCGCAGCGCGGAGCGCCTCGTCGACAAGAAA
TTGTCAGTCGCGGAAGGTTTTCCGGATGGGTGAATGAATGGAGACGCGAG
GAATGGCCTCGTCGGGTGCTGGAGGGCTTGAAACGAAGTAATGGCGGCAA
ATTCGCCTTTCGCATAGGAGGAGACGGGGTCGACATTGGCTGAATGGCTG
CTAACTTCGGAGGAGGCCTTCTTGGGGAGGTCCATGAGGAGAGACTCGAC
GAGCTTCTGCATGACCTAAGAAACATATCACATGGGATTGTCAATAGTAA
CGCCTTGAGGCCCAGACTGGGTGTTCAGGTGCTTGATGATCTTCTGGGTG
TCTTTACAACACCCGTCCCTGCTGCACAAGACATGCATCTGGAAGGGCAT
ATGCCGCAGGACCATTCCGGGGATGCTCAGGGAGCTTACATGGATGATCC
TGAGGGCGAACACCCAGCTCACGGCGAACTTATCAACGATGAGCATGCAG
GCATGCATGGTCTGCCGATGGTGGTACCAAACCACGCAGAGCCAGTCCTG
GAGATCTCGAGCAGGCTTTCTGCAGCCGGAAAGTCGCATCTCCTGTACTA
TCTCGCTGCAGTTGCTATTTTACCATCTTTGTTCCATGGTATCCCGCTCG
GTGGGCATGAATCGGCAGTGGTATTCATTGACACGGACGGCCGTTTTGAT
GCTGAGCGGCTTAGAACAGTGCTGAGAGGGATCGTGCACGCCAATATTAA
CGCACTGGCCCAGGGATCGCCTGGATGGACGTCTGAGGTTGGAAATGAGG
AAATTGAAAGTATGCTTGTCGTCAGTTTGCAACATGTCCACGTCTTCCGC
CCACAATCGTCATCTGCTCTCCTTGCTACACTTCACCATCTGGATGCATA
CATACTTGATCTATCTCGCCATTTATCTTCCACTCGACCGGTGCATACTA
TCTATATTGATAGTGCCACTGCTTTCTTATGGCAGGATAAATTGCAGGAC
GAAATTGCCCGAGTGGAAGATATCGGGCACGTCCATGCTGACCCGGAGCA
TGAGCGTACTCAGAAACAACGGTTCCAGATCTCAGATCTCTATGCTGCCT
TTATAGCAAAATTGAAACGACTACAGCGACTTTTAGGTTGCATGGTGGTT
TACACCACTACGGTTCAGGGAAGATTCCCCGGTGCTCGTGGTGGTAACCC
AGCGTATACACCATCAGGACCCTACGATCTGTATACCCCAGGTCCTTCTG
TGCCAAAGGCGCCTTCTTTTGGGCCTGCTCTTCCAGCCCCTTGGGGTAGA
TTTCCTACTCTGCGAGTTGTTGTTCAACGGGATGCAGTTCGCCCCTTTCC
GCCTACCATGACTGCGCAGAATGCGCAGCGCGGAGCGCCTCGTCGACAAG
AAATTGTCAGTCGCGGAAGGTTTTCCGGATGGGTGAATGAATGGAGACGC
GAGGAATGGCCTCGTCGGGTGCTGGAGGGCTTGAAACGAAGTAATGGCGG
CAAATTCGCCTTTCGCATAGGAGGAGACGGGGTCGACATTGGCTGAATGG
CTGCTAACTTCGGAGGAGGCCTTCTTGGGGAGGTCCATGAGGAGAGACTC
GACGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000514-T1.utr3p1 | KJC3_000514-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000514-T1.utr5p1 | KJC3_000514-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1064952..1068141 - |
|
