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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1946503..1948818- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000788-T1 ID=KJC3_000788-T1|Name=KJC3_000788-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2316bp|location=Sequence derived from alignment at ch1:1946503..1948818- (Aspergillus niger KJC3)
TTTTAAACCTTTTATTTTCGTCTTTTAACTCTCACTGTGGTGGCTAGTAG
TTTCCCTTGCTGTACTTCAAACTACTACTATATACGTCTTCCAGCCCTAT
GTGTTTCAGTTCCAACCGTGTTTAAAACCAGTCTTACGCGCGGGCTTTCC
TGGCTTTGTCGATCTGGGGCCGATCTTTTCTCTACGTCATTTTCTATCTC
CTTTCCCTTTGACGTTTGTATCCCTGTTTTCAAGCAATTATTCCTTTTAA
GACGGAAGCGAATCTGTGTGGTCGTCATCACCTTTTTGCCCCTAGCAGGC
CGACTCCTTGTGTATGTGTCTCAGATCAAGTTGTGAAGCATATAGCTGGA
GACCGACATTCCTGAGTTGAGAGAACTTTACCCAGCAAGGGTAATTGCAA
TTCGAGGAACCTGTTCCCAATAGAGATCAGCAGAGGATCTGATCTGAGAC
TTTGTCCAAAAATTACAAACATGACTGCATTGTTACCCGAAGAGAACCCG
CAATGACTCCGGATCGCTTGTTTCCTAGACACTTGAGAAGCCCAGGGGAT
GATGGCTACCGAACTCCAACCATTGAAGATACGCAAAATGACCTTGCAGA
AAATTCTGGCGGGGATTCTTATTTCCACCCAAGAGGATCTATAATAAGCC
AAGCCCATACCTCGGCATTAGACGCCATTCACAGCTCTTCATATCGCAAG
TCAGAAGGAGATGGGGACGAGGGTGTGGATGGCATGGCTTATCCCCAGAG
TGAAGCTGAAACCAGACCATCTGGTCTTGGGTGGAAGAAGCGTATTCGTC
ACATTACCTGGGCATTTTTCACCCTGACTATGGCAACGGGAGGCATCGCA
AATGTTTTGTACTTTGGTGAGTGCGTTCTTGTCCTACGATAGGTATAGGG
TGAATGTACTGATTACCGGTATGAAATAGTACCCTATAGATTTCGCGGCT
TGGAAACCATTGGAATCATCTTCTTTCTAGCCAACTTATTCCTCTACCTC
TTAATCTGGTGTCTTTTGATCACACGATTCTACCTATACCCTTACACTTT
CAAAGCATCTTTTCTACACCCGACAGAATCCTTATTTGTTCCAGCTTCGC
TGGTCTCTTTCGGGACGATCCTGATCAATATCTCACAGTATGGACCCGAC
CATACAGGGCCCTGGCTCACATATGCGGTTGGAATCCTCTTTTGGATTGA
CGCAGCCCTGGCAGTCATCTCTTCTGCCGCTATCTACCTCATTCTGTGAG
TACAAAGACTCCTGACATTAATCTTGTGAGCCTAAAATTTAAGCAGGACA
ACTAATGCGCTGTAGATGGTCGACCCAGACATTTACAATTGCACAAATGA
CACCTATTTGGATCTTTCCTGCGTACCCAATGCTTATAATTGGCCCTCAT
GCTGGGATCCTGAGCTCCAAACTTGAGCCTGCTCGCTCTTTGCGAATCAT
AATCGGTGGTACCACTATCCAAGGCGTTGGCTTCTTGGTATCCCTGATGG
TGTACTCGGCGTTTATTTACCGGCTGATGTCGCAAAAGCTGCCCCGAGAA
AATGTCCGACCAGGTATGTTCGTGTCGGTTGGTCCCAGTGCCTTTACTGT
GTCTGGGATTGTCAATATGGCCGCCCATGCCAAAAGAAGCTTCCCGGAGG
ATTTCATGGGCAATGGTGCATTAGCTGCAGACATTGTGAAAGTTGTTGCT
AACTTTTCCTGCTTATGGCTATGGGGGTAAGGATGACCGGCCCACCTACA
TTGATAAATTCTACGAGGTCCGTACTAATGCATGACTCAGGCTAGCAATA
TTTTTCTTCTTCATTGCAAGCTTCGCACATTGGTCTGCCATTGGACCGGG
CCGGATGGTCTTTTCCATGGCATGGTTCTCATTTGTGTTCCCAAATACAG
CACTGATAACGGCGACCTTTGCAATTGGAAAGGCTTTCTCGTGCAAGGCA
ATATCCATCATCGGCTGCGCTATGGTATTTCCGCTTATCTTGATGTATAT
CTTCGTCTTCTATATGATGGTGCGTGCCATCGTGCATCGCCAAATACTCT
GGCCTCAGAAGGGCGAAGATAAAGACGAAGGAGGCTTTGAGGTCAACCGA
ATCAAGCCTGAGTCACCAGGTGAAATTACACCTGTATGACGGAGTGTCAA
CGCTTCACTCTTGCAGGCGAATGGTTGTTAGGATGGGGACGAACTTTTCG
GGGGTTCCTTTGTTTGGGTCATTTAGCGCAGCATATATACCCTAAGATGC
ATATAGTCGGTTACCAAAAGACGACTAAAATTCTTTTTGGTAGAACAAAT
CACTTATCTATGAGAG back to topCoding sequence (CDS) from alignment at ch1:1946503..1948818- >KJC3_000788-T1 ID=KJC3_000788-T1|Name=KJC3_000788-T1|organism=Aspergillus niger KJC3|type=CDS|length=5760bp|location=Sequence derived from alignment at ch1:1946503..1948818- (Aspergillus niger KJC3)
GCTAGCAATATTTTTCTTCTTCATTGCAAGCTTCGCACATTGGTCTGCCA
TTGGACCGGGCCGGATGGTCTTTTCCATGGCATGGTTCTCATTTGTGTTC
CCAAATACAGCACTGATAACGGCGACCTTTGCAATTGGAAAGGCTTTCTC
GTGCAAGGCAATATCCATCATCGGCTGCGCTATGGTATTTCCGCTTATCT
TGATGTATATCTTCGTCTTCTATATGATGGTGCGTGCCATCGTGCATCGC
CAAATACTCTGGCCTCAGAAGGGCGAAGATAAAGACGAAGGAGGCTTTGA
GGTCAACCGAATCAAGCCTGAGTCACCAGGTGAAATTACACCTGTATGAA
TGGTCGACCCAGACATTTACAATTGCACAAATGACACCTATTTGGATCTT
TCCTGCGTACCCAATGCTTATAATTGGCCCTCATGCTGGGATCCTGAGCT
CCAAACTTGAGCCTGCTCGCTCTTTGCGAATCATAATCGGTGGTACCACT
ATCCAAGGCGTTGGCTTCTTGGTATCCCTGATGGTGTACTCGGCGTTTAT
TTACCGGCTGATGTCGCAAAAGCTGCCCCGAGAAAATGTCCGACCAGGTA
TGTTCGTGTCGGTTGGTCCCAGTGCCTTTACTGTGTCTGGGATTGTCAAT
ATGGCCGCCCATGCCAAAAGAAGCTTCCCGGAGGATTTCATGGGCAATGG
TGCATTAGCTGCAGACATTGTGAAAGTTGTTGCTAACTTTTCCTGCTTAT
GGCTATGGGGTACCCTATAGATTTCGCGGCTTGGAAACCATTGGAATCAT
CTTCTTTCTAGCCAACTTATTCCTCTACCTCTTAATCTGGTGTCTTTTGA
TCACACGATTCTACCTATACCCTTACACTTTCAAAGCATCTTTTCTACAC
CCGACAGAATCCTTATTTGTTCCAGCTTCGCTGGTCTCTTTCGGGACGAT
CCTGATCAATATCTCACAGTATGGACCCGACCATACAGGGCCCTGGCTCA
CATATGCGGTTGGAATCCTCTTTTGGATTGACGCAGCCCTGGCAGTCATC
TCTTCTGCCGCTATCTACCTCATTCTATGACTCCGGATCGCTTGTTTCCT
AGACACTTGAGAAGCCCAGGGGATGATGGCTACCGAACTCCAACCATTGA
AGATACGCAAAATGACCTTGCAGAAAATTCTGGCGGGGATTCTTATTTCC
ACCCAAGAGGATCTATAATAAGCCAAGCCCATACCTCGGCATTAGACGCC
ATTCACAGCTCTTCATATCGCAAGTCAGAAGGAGATGGGGACGAGGGTGT
GGATGGCATGGCTTATCCCCAGAGTGAAGCTGAAACCAGACCATCTGGTC
TTGGGTGGAAGAAGCGTATTCGTCACATTACCTGGGCATTTTTCACCCTG
ACTATGGCAACGGGAGGCATCGCAAATGTTTTGTACTTTGGCTAGCAATA
TTTTTCTTCTTCATTGCAAGCTTCGCACATTGGTCTGCCATTGGACCGGG
CCGGATGGTCTTTTCCATGGCATGGTTCTCATTTGTGTTCCCAAATACAG
CACTGATAACGGCGACCTTTGCAATTGGAAAGGCTTTCTCGTGCAAGGCA
ATATCCATCATCGGCTGCGCTATGGTATTTCCGCTTATCTTGATGTATAT
CTTCGTCTTCTATATGATGGTGCGTGCCATCGTGCATCGCCAAATACTCT
GGCCTCAGAAGGGCGAAGATAAAGACGAAGGAGGCTTTGAGGTCAACCGA
ATCAAGCCTGAGTCACCAGGTGAAATTACACCTGTATGAATGGTCGACCC
AGACATTTACAATTGCACAAATGACACCTATTTGGATCTTTCCTGCGTAC
CCAATGCTTATAATTGGCCCTCATGCTGGGATCCTGAGCTCCAAACTTGA
GCCTGCTCGCTCTTTGCGAATCATAATCGGTGGTACCACTATCCAAGGCG
TTGGCTTCTTGGTATCCCTGATGGTGTACTCGGCGTTTATTTACCGGCTG
ATGTCGCAAAAGCTGCCCCGAGAAAATGTCCGACCAGGTATGTTCGTGTC
GGTTGGTCCCAGTGCCTTTACTGTGTCTGGGATTGTCAATATGGCCGCCC
ATGCCAAAAGAAGCTTCCCGGAGGATTTCATGGGCAATGGTGCATTAGCT
GCAGACATTGTGAAAGTTGTTGCTAACTTTTCCTGCTTATGGCTATGGGG
TACCCTATAGATTTCGCGGCTTGGAAACCATTGGAATCATCTTCTTTCTA
GCCAACTTATTCCTCTACCTCTTAATCTGGTGTCTTTTGATCACACGATT
CTACCTATACCCTTACACTTTCAAAGCATCTTTTCTACACCCGACAGAAT
CCTTATTTGTTCCAGCTTCGCTGGTCTCTTTCGGGACGATCCTGATCAAT
ATCTCACAGTATGGACCCGACCATACAGGGCCCTGGCTCACATATGCGGT
TGGAATCCTCTTTTGGATTGACGCAGCCCTGGCAGTCATCTCTTCTGCCG
CTATCTACCTCATTCTATGACTCCGGATCGCTTGTTTCCTAGACACTTGA
GAAGCCCAGGGGATGATGGCTACCGAACTCCAACCATTGAAGATACGCAA
AATGACCTTGCAGAAAATTCTGGCGGGGATTCTTATTTCCACCCAAGAGG
ATCTATAATAAGCCAAGCCCATACCTCGGCATTAGACGCCATTCACAGCT
CTTCATATCGCAAGTCAGAAGGAGATGGGGACGAGGGTGTGGATGGCATG
GCTTATCCCCAGAGTGAAGCTGAAACCAGACCATCTGGTCTTGGGTGGAA
GAAGCGTATTCGTCACATTACCTGGGCATTTTTCACCCTGACTATGGCAA
CGGGAGGCATCGCAAATGTTTTGTACTTTGGCTAGCAATATTTTTCTTCT
TCATTGCAAGCTTCGCACATTGGTCTGCCATTGGACCGGGCCGGATGGTC
TTTTCCATGGCATGGTTCTCATTTGTGTTCCCAAATACAGCACTGATAAC
GGCGACCTTTGCAATTGGAAAGGCTTTCTCGTGCAAGGCAATATCCATCA
TCGGCTGCGCTATGGTATTTCCGCTTATCTTGATGTATATCTTCGTCTTC
TATATGATGGTGCGTGCCATCGTGCATCGCCAAATACTCTGGCCTCAGAA
GGGCGAAGATAAAGACGAAGGAGGCTTTGAGGTCAACCGAATCAAGCCTG
AGTCACCAGGTGAAATTACACCTGTATGAATGGTCGACCCAGACATTTAC
AATTGCACAAATGACACCTATTTGGATCTTTCCTGCGTACCCAATGCTTA
TAATTGGCCCTCATGCTGGGATCCTGAGCTCCAAACTTGAGCCTGCTCGC
TCTTTGCGAATCATAATCGGTGGTACCACTATCCAAGGCGTTGGCTTCTT
GGTATCCCTGATGGTGTACTCGGCGTTTATTTACCGGCTGATGTCGCAAA
AGCTGCCCCGAGAAAATGTCCGACCAGGTATGTTCGTGTCGGTTGGTCCC
AGTGCCTTTACTGTGTCTGGGATTGTCAATATGGCCGCCCATGCCAAAAG
AAGCTTCCCGGAGGATTTCATGGGCAATGGTGCATTAGCTGCAGACATTG
TGAAAGTTGTTGCTAACTTTTCCTGCTTATGGCTATGGGGTACCCTATAG
ATTTCGCGGCTTGGAAACCATTGGAATCATCTTCTTTCTAGCCAACTTAT
TCCTCTACCTCTTAATCTGGTGTCTTTTGATCACACGATTCTACCTATAC
CCTTACACTTTCAAAGCATCTTTTCTACACCCGACAGAATCCTTATTTGT
TCCAGCTTCGCTGGTCTCTTTCGGGACGATCCTGATCAATATCTCACAGT
ATGGACCCGACCATACAGGGCCCTGGCTCACATATGCGGTTGGAATCCTC
TTTTGGATTGACGCAGCCCTGGCAGTCATCTCTTCTGCCGCTATCTACCT
CATTCTATGACTCCGGATCGCTTGTTTCCTAGACACTTGAGAAGCCCAGG
GGATGATGGCTACCGAACTCCAACCATTGAAGATACGCAAAATGACCTTG
CAGAAAATTCTGGCGGGGATTCTTATTTCCACCCAAGAGGATCTATAATA
AGCCAAGCCCATACCTCGGCATTAGACGCCATTCACAGCTCTTCATATCG
CAAGTCAGAAGGAGATGGGGACGAGGGTGTGGATGGCATGGCTTATCCCC
AGAGTGAAGCTGAAACCAGACCATCTGGTCTTGGGTGGAAGAAGCGTATT
CGTCACATTACCTGGGCATTTTTCACCCTGACTATGGCAACGGGAGGCAT
CGCAAATGTTTTGTACTTTGGCTAGCAATATTTTTCTTCTTCATTGCAAG
CTTCGCACATTGGTCTGCCATTGGACCGGGCCGGATGGTCTTTTCCATGG
CATGGTTCTCATTTGTGTTCCCAAATACAGCACTGATAACGGCGACCTTT
GCAATTGGAAAGGCTTTCTCGTGCAAGGCAATATCCATCATCGGCTGCGC
TATGGTATTTCCGCTTATCTTGATGTATATCTTCGTCTTCTATATGATGG
TGCGTGCCATCGTGCATCGCCAAATACTCTGGCCTCAGAAGGGCGAAGAT
AAAGACGAAGGAGGCTTTGAGGTCAACCGAATCAAGCCTGAGTCACCAGG
TGAAATTACACCTGTATGAATGGTCGACCCAGACATTTACAATTGCACAA
ATGACACCTATTTGGATCTTTCCTGCGTACCCAATGCTTATAATTGGCCC
TCATGCTGGGATCCTGAGCTCCAAACTTGAGCCTGCTCGCTCTTTGCGAA
TCATAATCGGTGGTACCACTATCCAAGGCGTTGGCTTCTTGGTATCCCTG
ATGGTGTACTCGGCGTTTATTTACCGGCTGATGTCGCAAAAGCTGCCCCG
AGAAAATGTCCGACCAGGTATGTTCGTGTCGGTTGGTCCCAGTGCCTTTA
CTGTGTCTGGGATTGTCAATATGGCCGCCCATGCCAAAAGAAGCTTCCCG
GAGGATTTCATGGGCAATGGTGCATTAGCTGCAGACATTGTGAAAGTTGT
TGCTAACTTTTCCTGCTTATGGCTATGGGGTACCCTATAGATTTCGCGGC
TTGGAAACCATTGGAATCATCTTCTTTCTAGCCAACTTATTCCTCTACCT
CTTAATCTGGTGTCTTTTGATCACACGATTCTACCTATACCCTTACACTT
TCAAAGCATCTTTTCTACACCCGACAGAATCCTTATTTGTTCCAGCTTCG
CTGGTCTCTTTCGGGACGATCCTGATCAATATCTCACAGTATGGACCCGA
CCATACAGGGCCCTGGCTCACATATGCGGTTGGAATCCTCTTTTGGATTG
ACGCAGCCCTGGCAGTCATCTCTTCTGCCGCTATCTACCTCATTCTATGA
CTCCGGATCGCTTGTTTCCTAGACACTTGAGAAGCCCAGGGGATGATGGC
TACCGAACTCCAACCATTGAAGATACGCAAAATGACCTTGCAGAAAATTC
TGGCGGGGATTCTTATTTCCACCCAAGAGGATCTATAATAAGCCAAGCCC
ATACCTCGGCATTAGACGCCATTCACAGCTCTTCATATCGCAAGTCAGAA
GGAGATGGGGACGAGGGTGTGGATGGCATGGCTTATCCCCAGAGTGAAGC
TGAAACCAGACCATCTGGTCTTGGGTGGAAGAAGCGTATTCGTCACATTA
CCTGGGCATTTTTCACCCTGACTATGGCAACGGGAGGCATCGCAAATGTT
TTGTACTTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015140 | malate transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0071423 | malate transmembrane transport |
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000788-T1.utr3p1 | KJC3_000788-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000788-T1.utr5p1 | KJC3_000788-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR030185 |
| DBxref | InterPro:IPR038665 |
| DBxref | InterPro:IPR004695 |
| DBxref | PFAM:PF03595 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1946503..1948818 - |
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