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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2515142..2517309- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000991-T1 ID=KJC3_000991-T1|Name=KJC3_000991-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2168bp|location=Sequence derived from alignment at ch1:2515142..2517309- (Aspergillus niger KJC3)
GGGGAAAAAAAAAAAAGCATAGCTGTCCAGCTGTTCTTCTGGTTGTTTTG
TCGAGTTTCCTCCTCGTCCGGCCGAAGATGTCGGAGCCGAGACTCGGCCG
CGGCGGTACTTGGCGGGAGACTAAACCTCAAGAGGAATAGCGGGGCAAAC
GAGAGGGAAGCCAGTCCAACGGTTGTGCATCGATCGATCCACCGATCCCG
CCCTCCACGGCTCTCCAATCCGGTCTTTTCTCTTGATTTTTTCCTTTTTT
AATTTTTTTAATTCTATTTTCTGGCGGGAGTCTAGTACGTACTCTAGTAG
TAGTCTACTACTCCAAGCTGTGTAGTTTGCCTCAGCTCTCTCTCTCTCTC
TCTCCTGCTGAGCTTTCCCCTGCTTCTCATTCATTCCCTCCCCCCCCCAA
AATGGCTAAAATGGGCCTTCCGACGGCAGACATCGGAGCCGACCGAGGCT
GGATGCCCTGCATCCGGCTGGGGTGATCTCTCGGTCCCCCTTCACCGGCC
CTGTGCAATTATCGTTTCGACAATGGTCATGGCTTTTCTTGCGCGTCTCC
AGTCCAATTATGCTGACCCTCATTATTCTCGCTGGCCGTGACTTTTTCGA
CCGTTGCAAGCCATTACATCATTGCGTCTCGGCTGGCCTGGCGATCGGTT
TCTGACACCGGCTTCTCCTGAAACCTTCAACCTTTATATAGTCCATCCCC
CGATGTTCTCTACTGCCCAGCATCCTTCCGATCCACGGTTCAATATCAAA
CAGCTTCTCTATATTTACCCATCTCTTGCCTCTATCCGCCTTCCTCTACT
TGCCACTCGACCTTGACTGTCGACTATCAAGTTTGCCTCCCACACACCAA
GTATCAGACAATCTACATCGTCATCCATCCAATTCAACCCCATCCAAGTC
CACTAGTATGGCATACCCCAGGCCCGATTCCTTCTCGCTCGACGACGAGC
GGATGTACAGCATGAGCCATCCGAGCCCACTCACTCGTCCCAACGATACC
TTCGCCAAGGGTCCCGATCCTCTGTCGGCTAACTGGAGCTACGACAATGC
CATCGATCTCTTCTCCCTCAACACCATGATGCCGGAGACTTTCCCCTTGG
AGATGTCCAACGAGATGATGAACTTGGACCCTAAGGACTTTCCCGCCGAC
TTCTTCGCCCCACCCCCAGATATCAGTGCGTTCACCATCTCCAACCACTC
GGGTGAGGATGCTGCCTCCTGCGGCTCTCTCTCTTCGGTATGTCTATACC
CCATTGACTTTGAATGATGAACTATAACTAACATTACACTCAATCAGGAC
CTGGACAGTGACGACCAATCATGGTCTCCCACCTGCCGTGTCTCTCCCCT
TGAGCCTATCCACATGGAGCTGCCCAAGCCTGCTGCTCGCACTTCCAAAA
CATCTACCCGTCGCAAGACTGCGTCTCAACCGAAGCCCCGCGAGGTTACG
GCGACAAGGTGGTCGTCCAGTCCGGAAATTACACCGCAGGACTACCCCGC
CACCAGTGTCTCACCCCCGCCCGCCCCCTCCTCCCCTGCCGCCAACAACA
CCGCCCGCAAGACCACCCGTAGTCTCTCCAGCGACTCCAACGCCAGCACG
GGTCAGGCCCAGACCACCACCGGCCGCAATGCGGCGAAGCGGGCGGCGCA
CAACATCATCGAGAAGCGGTACCGCACGAACATGAACGCCAAGTTCGTTG
CCTTGGAGAAGGCGATGTGCGGCGGAGTCCAGAAGCCCACCAAGGGGGGC
TCGGCGTCGCTGAAGAAGTCGGAGATCCTGACCAATGCCATCACCTTCAT
GCAAGAATTGCAGGAGGAAAACAAGGTGCTCCAGAAGGAGCTTGCCATGC
TCAAACAAAGCATGGTCCCGAACGGGATGTGGCGACATAGCAAGGGGAGT
GAGGCGTTTCACGCTTAAGCCAAGCGATGCGGTGTCTTATCTCTACCCAG
ATCCCCTTGTAATGACCGTCACGGATATTGTATAATATTATGATTCTCTT
TGCTTTTCTTTTGTTTCTTACATCCTACTACTACTACTACAACATCTGGG
AGTTTTATTCATGGCCCTCTCCTGTCGTGGGCGGCGAATTATGGGATTGT
TTGGTGTTGTGTTGATATATACCCGGAGATAAAAAGTTCGACCTAATCCA
CTCAACTACTTCTACTCA back to topCoding sequence (CDS) from alignment at ch1:2515142..2517309- >KJC3_000991-T1 ID=KJC3_000991-T1|Name=KJC3_000991-T1|organism=Aspergillus niger KJC3|type=CDS|length=1902bp|location=Sequence derived from alignment at ch1:2515142..2517309- (Aspergillus niger KJC3)
GACCTGGACAGTGACGACCAATCATGGTCTCCCACCTGCCGTGTCTCTCC
CCTTGAGCCTATCCACATGGAGCTGCCCAAGCCTGCTGCTCGCACTTCCA
AAACATCTACCCGTCGCAAGACTGCGTCTCAACCGAAGCCCCGCGAGGTT
ACGGCGACAAGGTGGTCGTCCAGTCCGGAAATTACACCGCAGGACTACCC
CGCCACCAGTGTCTCACCCCCGCCCGCCCCCTCCTCCCCTGCCGCCAACA
ACACCGCCCGCAAGACCACCCGTAGTCTCTCCAGCGACTCCAACGCCAGC
ACGGGTCAGGCCCAGACCACCACCGGCCGCAATGCGGCGAAGCGGGCGGC
GCACAACATCATCGAGAAGCGGTACCGCACGAACATGAACGCCAAGTTCG
TTGCCTTGGAGAAGGCGATGTGCGGCGGAGTCCAGAAGCCCACCAAGGGG
GGCTCGGCGTCGCTGAAGAAGTCGGAGATCCTGACCAATGCCATCACCTT
CATGCAAGAATTGCAGGAGGAAAACAAGGTGCTCCAGAAGGAGCTTGCCA
TGCTCAAACAAAGCATGGTCCCGAACGGGATGTGGCGACATAGCAAGGGG
AGTGAGGCGTTTCACGCTTAAATGGCATACCCCAGGCCCGATTCCTTCTC
GCTCGACGACGAGCGGATGTACAGCATGAGCCATCCGAGCCCACTCACTC
GTCCCAACGATACCTTCGCCAAGGGTCCCGATCCTCTGTCGGCTAACTGG
AGCTACGACAATGCCATCGATCTCTTCTCCCTCAACACCATGATGCCGGA
GACTTTCCCCTTGGAGATGTCCAACGAGATGATGAACTTGGACCCTAAGG
ACTTTCCCGCCGACTTCTTCGCCCCACCCCCAGATATCAGTGCGTTCACC
ATCTCCAACCACTCGGGTGAGGATGCTGCCTCCTGCGGCTCTCTCTCTTC
GGACCTGGACAGTGACGACCAATCATGGTCTCCCACCTGCCGTGTCTCTC
CCCTTGAGCCTATCCACATGGAGCTGCCCAAGCCTGCTGCTCGCACTTCC
AAAACATCTACCCGTCGCAAGACTGCGTCTCAACCGAAGCCCCGCGAGGT
TACGGCGACAAGGTGGTCGTCCAGTCCGGAAATTACACCGCAGGACTACC
CCGCCACCAGTGTCTCACCCCCGCCCGCCCCCTCCTCCCCTGCCGCCAAC
AACACCGCCCGCAAGACCACCCGTAGTCTCTCCAGCGACTCCAACGCCAG
CACGGGTCAGGCCCAGACCACCACCGGCCGCAATGCGGCGAAGCGGGCGG
CGCACAACATCATCGAGAAGCGGTACCGCACGAACATGAACGCCAAGTTC
GTTGCCTTGGAGAAGGCGATGTGCGGCGGAGTCCAGAAGCCCACCAAGGG
GGGCTCGGCGTCGCTGAAGAAGTCGGAGATCCTGACCAATGCCATCACCT
TCATGCAAGAATTGCAGGAGGAAAACAAGGTGCTCCAGAAGGAGCTTGCC
ATGCTCAAACAAAGCATGGTCCCGAACGGGATGTGGCGACATAGCAAGGG
GAGTGAGGCGTTTCACGCTTAAATGGCATACCCCAGGCCCGATTCCTTCT
CGCTCGACGACGAGCGGATGTACAGCATGAGCCATCCGAGCCCACTCACT
CGTCCCAACGATACCTTCGCCAAGGGTCCCGATCCTCTGTCGGCTAACTG
GAGCTACGACAATGCCATCGATCTCTTCTCCCTCAACACCATGATGCCGG
AGACTTTCCCCTTGGAGATGTCCAACGAGATGATGAACTTGGACCCTAAG
GACTTTCCCGCCGACTTCTTCGCCCCACCCCCAGATATCAGTGCGTTCAC
CATCTCCAACCACTCGGGTGAGGATGCTGCCTCCTGCGGCTCTCTCTCTT
CG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000991-T1.utr3p1 | KJC3_000991-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000991-T1.utr5p1 | KJC3_000991-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036638 |
| DBxref | InterPro:IPR011598 |
| DBxref | PFAM:PF00010 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2515142..2517309 - |
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