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KJC3_001288-T1, KJC3_001288-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001288-T1
Unique NameKJC3_001288-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3313378..3316477+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001288-T1 ID=KJC3_001288-T1|Name=KJC3_001288-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3100bp|location=Sequence derived from alignment at ch1:3313378..3316477+ (Aspergillus niger KJC3)
CCGGCTATGAACTGTTCCTTCTCCTCTGGGTCCATCTGAAACGGTGGCTC
AATTTCGCCGACACTCGGCCGCCATCAAGTAAGATCGCTCCAAAATGCGG
GCTCGAACACACTCGCCACGCACCGGTTGGCTGCTGAGCCTCGACTACTC
GGCGCTAACGAGTTTATACTGGCTTAATCTCCGGCGCTGCTCTCCTAACG
GCGGGTGATGCCGCAACGATCGTCGCTTATCATCATCTCCAAATCCGCTT
CTTTCCTCCAGCGCGAACTAGATCCATCCCCGATGTGTTTCGATTATAAA
CGACCGTAAGCGTGGTCCTCCGCCGCCCCCCCTCTCCGATGTTAGCTCTT
CTTTCTTGCTTTTTCCTGACCTGTTCATCCCGACTACTAGATACATTGCC
TTCCACACCCTCCCCCCCCCAACAACGTGTTTGCGTGCTTTCGTCTGGCC
CATCCATAACGCACTAGCTAGCCTGCTACTGCCGCCGTGTCAACTCGTCG
TACCACTTATGGGACCCCGCACTCCGGGTTATCTCCACATTGTTTGCCTG
GACCAGTTAGTATCTGCACCCTAGCAGTTGGCCAACCTCTGCGTCGGATC
CGGCTATGGAACCAACCTCGAAGGCTCGAATCCGCAAAACTCCGCCGGTC
TCCGCCCCAGCTCCCCGGAAAAGGCGTAGGAGGACGGTCGTAAGCCAAGC
GGCTGATGATTGCTTTACTTGCGCCCGACAGGGTACTCCCTGCGACCGGC
GTCGCCCATTTTGCTCCCAGTGCTTGGACAGCGCCCGCAATTGCGCGGGG
TACAAGACAGCGTTGACATGGGGCGTAGGAGTTGCCAGTCGGGGAAAGCT
TCGAGGATTGTCCCTCCCCGTGACCGGGGCACAGCCTGCGGTCGCACCCC
CGAAGCTTCCCCGTGCGACAGGTCCACGAGCAGTGTCCAAATCGCAACCG
GCTCTTGACACAGCCGCAGAAAAACGACGACTTCATGATAAGCAGCGTTC
ATCAGCCGCCGGGCTTACAGAGCATGGGTCTGTCTCGATTCCACCTACTT
CACAACGCCGCTTGTGCTCACCGGAGTACTACACTGTGGATTCCCATGTT
AAGCCGAATCACCATAATCCTTATTCTTCACGTGCGACAAAGACCGATTC
TTTGAAACAATACCATGCCCCATTGGTCGCAAACCCCGATTCATCAAGGG
CCTGGATGGGGTTAGAACAGACACCGGTACCGATACAGTGTCCGTGGCCA
GCCCTGACTCCGGAACAGAAAGATAATGCTTCGGATGAGCAACATGAAGA
AACCTCTTATAACGAGGTTTCACCACGTATGAGTGCTTGCCAGCCGCCAT
CATTATCTCAGCAGCTGCTGGCGCGTTCCGTGGGACGTACACCTCGACTT
CGATACCTAATTAGTTATTATGCCGAAGTCATTGCTCCGATGATTGTGGC
ATTTGATAGTCCAACCAATCCTTTTCGAACATATATCCTGCGACTGGCGC
AGGAGAGCACATCGCTTCAAGAAGCCATCGCGACGTTGGCAAGCTGCAAT
CTGCGACAGCGACGCGAACGAGGCACGAGGTCGACGGAGCGAACTTTGCC
GGGGCGCCTGTCGTCCATGGCCCATCAAGCCTTAACCGACGGAGCATTAC
AGGACCGGACCGGTATCTTTATGCCTAAAGATTATGCCCAGGAAGAGCAG
TATCATCGAGGCATGGCGGTCTCCGCCTTGAATCGGGAATTGGCCGACTC
ACATCAGAGGCTTTCAGACTCCGTCCTGGCGACCTTACTCATCCTCTGTC
TATTCCACGGGTGTGATACTGGGGTGGCTCAATTCAAGACCCAGTTTGCG
GGGGTGACAAAATTGTTGGCTATTCGACTGTGCAACTCACCTTGCATGTC
GGATGAACTGAAGTGGTTTGTTCGCATGTTCACATGGATTGACACGATGA
CCGCCACCACCAATGACCGCGAGGTACAGCTTCGCGGTGCTTGCCTGGAT
ATCACCGCCGCCTCAGATGGCGAATGGGGACTGGAAAATCTGGCGGGCTG
TGATGCCGGACTTTTCAGAATTGTAGCGCAGCTAGGTCGTTTGAACCTTC
TGAGTCAAAATCAAGAAGTCCGCACATCTACGCCACCAGACATCCATATA
CCATCCACTACTCTCCCGCCCTCGATGGCGTTCTTCCCATCGAACATTCC
AGCCACCTCGTCCGGTCCTTTTGCATTTACCTTGCCGCCGCTGCCGCCTC
CTGGTGATCGCGACAGAGGACAGCTGCCGCCGGCGTTCTGGGCTGAATGG
TATTCTCTCCGACAGAAGCTTGAGTCCTGGCGATTTGTTCCCCACCAATC
GCAGTCACAGTCACCTCTCTTTACATCCAGCCACGCCTACATCTCGCCAC
CTTCATCGCCGACAGACCAGCCGGTGGTCGCAGCTCACAATCTCAAGGAC
GTCATACACATCTCTGAGTCATTCCGTCATGCGGCGATCTTGTACAGCGA
GCGACTCGCCTATCCAGACCTACCGTCCGATCACCCTCGTATTCAAAACA
TTGTGCAACACATAATGAGTCACATTATGACCGTTCAATCTGACGCGTAT
CTCCTGTGGCCACTATTCATCACCGGGTCGGAGTGCGTGCGTGCCGATCA
TCGCGCCATTATCCGCCAACGGTGCAAAGATCTATCCAGGGACTCTGGGT
TCTTCAACAACCTCTCATGCTTGCAGCTCCTGGAGAAGATCTGGGCAGAG
AACCCTGCCGTGGATGTGATCCCTGTTGTCTCATCCCTTGATTTCGGCTT
GCAGGCAGCCGCCAGCGGGTGCGTGAGCGAGGTTACATTTCTCCCGCCTG
GAAGCTGGGCCTCGTCCCAGCATGAGGCTTTCATGTCTCCGACACTGCCC
TCTGTCTCTCGGAAGCAGGGATTCCGCTGGCACGAGGCGATGCAAACCAA
ACGCGCGGAGGACGAGTATATGACTGTATGACGTGACCTGACGGATACGT
GCATCAAAACGACGAGTCCAGCATGAATTGCGAGGACCAATTATAATATA
GAGGTATCATATTAGCGGAATATAATGAACATAATGCAACATTCCCCCAC
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Coding sequence (CDS) from alignment at ch1:3313378..3316477+

>KJC3_001288-T1 ID=KJC3_001288-T1|Name=KJC3_001288-T1|organism=Aspergillus niger KJC3|type=CDS|length=2376bp|location=Sequence derived from alignment at ch1:3313378..3316477+ (Aspergillus niger KJC3)
ATGGAACCAACCTCGAAGGCTCGAATCCGCAAAACTCCGCCGGTCTCCGC
CCCAGCTCCCCGGAAAAGGCGTAGGAGGACGGTCGTAAGCCAAGCGGCTG
ATGATTGCTTTACTTGCGCCCGACAGGGTACTCCCTGCGACCGGCGTCGC
CCATTTTGCTCCCAGTGCTTGGACAGCGCCCGCAATTGCGCGGGGTACAA
GACAGCGTTGACATGGGGCGTAGGAGTTGCCAGTCGGGGAAAGCTTCGAG
GATTGTCCCTCCCCGTGACCGGGGCACAGCCTGCGGTCGCACCCCCGAAG
CTTCCCCGTGCGACAGGTCCACGAGCAGTGTCCAAATCGCAACCGGCTCT
TGACACAGCCGCAGAAAAACGACGACTTCATGATAAGCAGCGTTCATCAG
CCGCCGGGCTTACAGAGCATGGGTCTGTCTCGATTCCACCTACTTCACAA
CGCCGCTTGTGCTCACCGGAGTACTACACTGTGGATTCCCATGTTAAGCC
GAATCACCATAATCCTTATTCTTCACGTGCGACAAAGACCGATTCTTTGA
AACAATACCATGCCCCATTGGTCGCAAACCCCGATTCATCAAGGGCCTGG
ATGGGGTTAGAACAGACACCGGTACCGATACAGTGTCCGTGGCCAGCCCT
GACTCCGGAACAGAAAGATAATGCTTCGGATGAGCAACATGAAGAAACCT
CTTATAACGAGGTTTCACCACGTATGAGTGCTTGCCAGCCGCCATCATTA
TCTCAGCAGCTGCTGGCGCGTTCCGTGGGACGTACACCTCGACTTCGATA
CCTAATTAGTTATTATGCCGAAGTCATTGCTCCGATGATTGTGGCATTTG
ATAGTCCAACCAATCCTTTTCGAACATATATCCTGCGACTGGCGCAGGAG
AGCACATCGCTTCAAGAAGCCATCGCGACGTTGGCAAGCTGCAATCTGCG
ACAGCGACGCGAACGAGGCACGAGGTCGACGGAGCGAACTTTGCCGGGGC
GCCTGTCGTCCATGGCCCATCAAGCCTTAACCGACGGAGCATTACAGGAC
CGGACCGGTATCTTTATGCCTAAAGATTATGCCCAGGAAGAGCAGTATCA
TCGAGGCATGGCGGTCTCCGCCTTGAATCGGGAATTGGCCGACTCACATC
AGAGGCTTTCAGACTCCGTCCTGGCGACCTTACTCATCCTCTGTCTATTC
CACGGGTGTGATACTGGGGTGGCTCAATTCAAGACCCAGTTTGCGGGGGT
GACAAAATTGTTGGCTATTCGACTGTGCAACTCACCTTGCATGTCGGATG
AACTGAAGTGGTTTGTTCGCATGTTCACATGGATTGACACGATGACCGCC
ACCACCAATGACCGCGAGGTACAGCTTCGCGGTGCTTGCCTGGATATCAC
CGCCGCCTCAGATGGCGAATGGGGACTGGAAAATCTGGCGGGCTGTGATG
CCGGACTTTTCAGAATTGTAGCGCAGCTAGGTCGTTTGAACCTTCTGAGT
CAAAATCAAGAAGTCCGCACATCTACGCCACCAGACATCCATATACCATC
CACTACTCTCCCGCCCTCGATGGCGTTCTTCCCATCGAACATTCCAGCCA
CCTCGTCCGGTCCTTTTGCATTTACCTTGCCGCCGCTGCCGCCTCCTGGT
GATCGCGACAGAGGACAGCTGCCGCCGGCGTTCTGGGCTGAATGGTATTC
TCTCCGACAGAAGCTTGAGTCCTGGCGATTTGTTCCCCACCAATCGCAGT
CACAGTCACCTCTCTTTACATCCAGCCACGCCTACATCTCGCCACCTTCA
TCGCCGACAGACCAGCCGGTGGTCGCAGCTCACAATCTCAAGGACGTCAT
ACACATCTCTGAGTCATTCCGTCATGCGGCGATCTTGTACAGCGAGCGAC
TCGCCTATCCAGACCTACCGTCCGATCACCCTCGTATTCAAAACATTGTG
CAACACATAATGAGTCACATTATGACCGTTCAATCTGACGCGTATCTCCT
GTGGCCACTATTCATCACCGGGTCGGAGTGCGTGCGTGCCGATCATCGCG
CCATTATCCGCCAACGGTGCAAAGATCTATCCAGGGACTCTGGGTTCTTC
AACAACCTCTCATGCTTGCAGCTCCTGGAGAAGATCTGGGCAGAGAACCC
TGCCGTGGATGTGATCCCTGTTGTCTCATCCCTTGATTTCGGCTTGCAGG
CAGCCGCCAGCGGGTGCGTGAGCGAGGTTACATTTCTCCCGCCTGGAAGC
TGGGCCTCGTCCCAGCATGAGGCTTTCATGTCTCCGACACTGCCCTCTGT
CTCTCGGAAGCAGGGATTCCGCTGGCACGAGGCGATGCAAACCAAACGCG
CGGAGGACGAGTATATGACTGTATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001288KJC3_001288Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001288-T1.utr5p1KJC3_001288-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001288-T1.exon1KJC3_001288-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001288-T1.cdsKJC3_001288-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001288-T1.utr3p1KJC3_001288-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001288-T1KJC3_001288-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3313378..3316477 +
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