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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:702085..702753+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001796-T1 ID=KJC3_001796-T1|Name=KJC3_001796-T1|organism=Aspergillus niger KJC3|type=mRNA|length=669bp|location=Sequence derived from alignment at ch2:702085..702753+ (Aspergillus niger KJC3)
AGCATCTTACATCCATTCAAACCCCGACCATAGTCCAACGCCCCAAAGGA
ACATAAACAAAAACAAAATGTTCTTCAACAAGTCCCTCCTGGCCACTACT
CTGGCCGTTTTCGCCTCCGGCGTTGTCGGCCAGATCATTGATGTATGTTG
ATATCCACATCCCTCTTTAGCAGGATGAAATTATGATGGACTACAATAGA
ACAGTGGCTAATATGAGTATCTCACTTAACAGATCGAATACGGAACCAGC
GAATACGACGCCCATCAACAGCAGGTTCAATTGCAGGAGCTCACTGAGCT
GGATTACCCGTACGGTTTCCAATGACCTCAACCTTTTAGGATTTCAAGCC
ATTTTTGTACTAATATCTTCGTTTGCAGTGGCACTTACTCTTACTTCTCT
ACCCCTGATATCTGTGATCTGTACAGCAACACCGAGGATTACCCGGCTCT
CTCGAATATTGGTGGTACGGGAGAGATCCCTACGACGTACATTGATGCTG
TCTACTGCTATACTCAGGAAGAGGAGGATCCTATTTTGTAGATGAGTTAT
GCTATGGGTCTTGATCATGGGAATGGGTATTTTGATTGATGAGGGTGTGT
ACTATGGTGGTTATTGGCTATGATAATACTATATAGATGTTGGATGTGTT
TACGTATATTATGGAAGGT back to topCoding sequence (CDS) from alignment at ch2:702085..702753+ >KJC3_001796-T1 ID=KJC3_001796-T1|Name=KJC3_001796-T1|organism=Aspergillus niger KJC3|type=CDS|length=945bp|location=Sequence derived from alignment at ch2:702085..702753+ (Aspergillus niger KJC3)
ATGTTCTTCAACAAGTCCCTCCTGGCCACTACTCTGGCCGTTTTCGCCTC
CGGCGTTGTCGGCCAGATCATTGATATCGAATACGGAACCAGCGAATACG
ACGCCCATCAACAGCAGGTTCAATTGCAGGAGCTCACTGAGCTGGATTAC
CCTGGCACTTACTCTTACTTCTCTACCCCTGATATCTGTGATCTGTACAG
CAACACCGAGGATTACCCGGCTCTCTCGAATATTGGTGGTACGGGAGAGA
TCCCTACGACGTACATTGATGCTGTCTACTGCTATACTCAGGAAGAGGAG
GATCCTATTTTGTAGATGTTCTTCAACAAGTCCCTCCTGGCCACTACTCT
GGCCGTTTTCGCCTCCGGCGTTGTCGGCCAGATCATTGATATCGAATACG
GAACCAGCGAATACGACGCCCATCAACAGCAGGTTCAATTGCAGGAGCTC
ACTGAGCTGGATTACCCTGGCACTTACTCTTACTTCTCTACCCCTGATAT
CTGTGATCTGTACAGCAACACCGAGGATTACCCGGCTCTCTCGAATATTG
GTGGTACGGGAGAGATCCCTACGACGTACATTGATGCTGTCTACTGCTAT
ACTCAGGAAGAGGAGGATCCTATTTTGTAGATGTTCTTCAACAAGTCCCT
CCTGGCCACTACTCTGGCCGTTTTCGCCTCCGGCGTTGTCGGCCAGATCA
TTGATATCGAATACGGAACCAGCGAATACGACGCCCATCAACAGCAGGTT
CAATTGCAGGAGCTCACTGAGCTGGATTACCCTGGCACTTACTCTTACTT
CTCTACCCCTGATATCTGTGATCTGTACAGCAACACCGAGGATTACCCGG
CTCTCTCGAATATTGGTGGTACGGGAGAGATCCCTACGACGTACATTGAT
GCTGTCTACTGCTATACTCAGGAAGAGGAGGATCCTATTTTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001796-T1.utr5p1 | KJC3_001796-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001796-T1.utr3p1 | KJC3_001796-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:702085..702753 + |
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