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KJC3_001894-T1, KJC3_001894-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001894-T1
Unique NameKJC3_001894-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:981365..983454-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001894-T1 ID=KJC3_001894-T1|Name=KJC3_001894-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2090bp|location=Sequence derived from alignment at ch2:981365..983454- (Aspergillus niger KJC3)
GAGTCAGTCTCGCAACACCAAGTCGACTCGATCAATCTCCAAAGCCTCTT
CTCGCTTCTTTCTCCCCTTTCCCTTCCCTCTTCCTTTGATTTCTTTCCCT
CCCTTTTCCCTCCCCCCCGCCTCCATCCTTTCTCACTACCCCATCCCATC
ATGCCCGCCCCCTCCACCACCCTCCTCATCGAGGGTTCTTTCACCGAGCT
CGCCGACGAGTTCGCCCAGTACATCGACGCCCTGCGCAAGTCCGAGGCCT
CCAACAGCCTTCAGTCCGAGATTTCCCCGCTTCTGCAGCCCCTTCGTGAG
CAGGAACAGTCCGATGCAGAGCCCGACCGCAAGCAGCGCGATGAGGTCCT
CAAGAAGCTGGTCTCCGCGGCCGTTGTCCTGAACGGCGCCCCCGAGAAGG
GTACGTATTATCGATAGACACCCCCTCCATACCATGAGACGTTGATCCTA
CAGAGACTGACGGACGGACGAATGAATTATACAGAGATCATCTCCGCCTA
CAACCTTCTCGTCCACCTTGTCCACCAGGCCTCCGACCCGGATATGTTCC
TGTCGCGCATCTGCACCTACCTCGCCAAACCCATCTCCTCCTCCCCTCAG
TTCGGCCCCTCCTTGGCCATCTCCATCCTGTCCACCATCTTCAACACGCT
TGCTCCCTCCGACTCCAGCCGCTACCACGTTCTCCTGGCTACCGTCGCCG
TCATCCGCCAGTCCAGCTCGTCCATTGCCTTTGACGCCCTCAAGTCGCAG
CTGGCCACCCAGCTGCCCGGCTGGCTTGCCGCCTGGGAGCTGGACGCCGA
CGAGGCCCAGCGCCTGCACCTCGCCATTGCCGATGCCGCCCAGGCGTCCG
GTGACCCCGAGTTGGCTCAAACCCACGTCGTCCAGGCCCTGCAGACCATC
CCTGCCGCCAATGCCAGCGCCCCCGAGGCCCGCGATCTGGCCGTCCGCGC
CCTGACCTCCGCTCTCACCCACCCGGCTGTCTTCGACTTCACCCCGCTGA
CTGCCTCCGACGCCGTCCAGGCCCTCCGGTCCAGCGACAGCACCCTCTTT
GAGCTGCTCGAGATCTTCACCGCCGATACCCTCGACGCCTACGAGGCCTT
TGTCTCCGCTACCCCTCTGGCCAGCATCTCCGGCGGCGTGCTGGCTGAGG
CCGGCGAGGCCCTGCAGAACAAGATGCGCCTGCTCACTCTGGCCTCCCTG
GCCGCTTCTACCCCGTCCCGCTCCCTTCCCTACGCCACCATTGCCACGGC
CCTCCGCGTGGAGCCCACCGACGTCGAGAAGTGGGTTATTGACACCATCC
GCGCCGGCCTCGTCGAGGGTAAGCTGTCGCAGCTGCGCTCCGAGTTCCTG
GTCCACCGGGCCACCTACCGTGTCTTTGGTGAGAAGCAGTGGGCCGAGGT
GCAGGGTCGCCTGATGGTCTGGCGCCGCAGCCTGGAGAACGTGCTGGGTG
TTGTTCGCAGCGAGCGGGAGCGCTTTGTTCGCGAGGGGCTGCAGGCGGCC
CAGGCTGCCGAGGAGGCTGCCCAGGGCAAGGGTAACGACAAGAAGGGTGG
TGACCGTCGCCGTCACAACAACAACCAGAACCAGAACCAGCAGCAGCAGC
AGCAACAGCAGCAGCAAGCACCTTCGGCGCCCGCCGCTGCCCCGGAGGCT
GTTGCCGTGGAGTAAAGGACTGATTACTGTTCGGTTGAATGATTGATTGA
TACACAGAGAAGCATACACATTGGGATGAATGAATAAAAAAGTTATCTGT
GTGTTGTTGTGAGTTGTGGGCTTGGAAGGTGTTCTTTCTATGTTAATGTT
CTGCTGTGTCTACATTTTTTATCCCCCTTTCCCTTTATTTCCATCTCATG
GGTTCCAATTTCCTTTTCCTTTTTCTTTTATTTATCATGGTAGCTATTGG
ATTCTAGACAGGTTTATATCCACATTTCATCATGAGAAGGTGGGGGGAAA
AACCTGACTGACAATGATACGAGTTATGCCGAGTGTGTAACTGAGTTATT
ATGTATATGCATCAAGTACTACACTATACATAGACCATTGGGGATACTGC
TGCGAGGGTTGTTTACTCATATAATATGAGCATATACGCC
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Coding sequence (CDS) from alignment at ch2:981365..983454-

>KJC3_001894-T1 ID=KJC3_001894-T1|Name=KJC3_001894-T1|organism=Aspergillus niger KJC3|type=CDS|length=2862bp|location=Sequence derived from alignment at ch2:981365..983454- (Aspergillus niger KJC3)
AGATCATCTCCGCCTACAACCTTCTCGTCCACCTTGTCCACCAGGCCTCC
GACCCGGATATGTTCCTGTCGCGCATCTGCACCTACCTCGCCAAACCCAT
CTCCTCCTCCCCTCAGTTCGGCCCCTCCTTGGCCATCTCCATCCTGTCCA
CCATCTTCAACACGCTTGCTCCCTCCGACTCCAGCCGCTACCACGTTCTC
CTGGCTACCGTCGCCGTCATCCGCCAGTCCAGCTCGTCCATTGCCTTTGA
CGCCCTCAAGTCGCAGCTGGCCACCCAGCTGCCCGGCTGGCTTGCCGCCT
GGGAGCTGGACGCCGACGAGGCCCAGCGCCTGCACCTCGCCATTGCCGAT
GCCGCCCAGGCGTCCGGTGACCCCGAGTTGGCTCAAACCCACGTCGTCCA
GGCCCTGCAGACCATCCCTGCCGCCAATGCCAGCGCCCCCGAGGCCCGCG
ATCTGGCCGTCCGCGCCCTGACCTCCGCTCTCACCCACCCGGCTGTCTTC
GACTTCACCCCGCTGACTGCCTCCGACGCCGTCCAGGCCCTCCGGTCCAG
CGACAGCACCCTCTTTGAGCTGCTCGAGATCTTCACCGCCGATACCCTCG
ACGCCTACGAGGCCTTTGTCTCCGCTACCCCTCTGGCCAGCATCTCCGGC
GGCGTGCTGGCTGAGGCCGGCGAGGCCCTGCAGAACAAGATGCGCCTGCT
CACTCTGGCCTCCCTGGCCGCTTCTACCCCGTCCCGCTCCCTTCCCTACG
CCACCATTGCCACGGCCCTCCGCGTGGAGCCCACCGACGTCGAGAAGTGG
GTTATTGACACCATCCGCGCCGGCCTCGTCGAGGGTAAGCTGTCGCAGCT
GCGCTCCGAGTTCCTGGTCCACCGGGCCACCTACCGTGTCTTTGGTGAGA
AGCAGTGGGCCGAGGTGCAGGGTCGCCTGATGGTCTGGCGCCGCAGCCTG
GAGAACGTGCTGGGTGTTGTTCGCAGCGAGCGGGAGCGCTTTGTTCGCGA
GGGGCTGCAGGCGGCCCAGGCTGCCGAGGAGGCTGCCCAGGGCAAGGGTA
ACGACAAGAAGGGTGGTGACCGTCGCCGTCACAACAACAACCAGAACCAG
AACCAGCAGCAGCAGCAGCAACAGCAGCAGCAAGCACCTTCGGCGCCCGC
CGCTGCCCCGGAGGCTGTTGCCGTGGAGTAAATGCCCGCCCCCTCCACCA
CCCTCCTCATCGAGGGTTCTTTCACCGAGCTCGCCGACGAGTTCGCCCAG
TACATCGACGCCCTGCGCAAGTCCGAGGCCTCCAACAGCCTTCAGTCCGA
GATTTCCCCGCTTCTGCAGCCCCTTCGTGAGCAGGAACAGTCCGATGCAG
AGCCCGACCGCAAGCAGCGCGATGAGGTCCTCAAGAAGCTGGTCTCCGCG
GCCGTTGTCCTGAACGGCGCCCCCGAGAAGGAGATCATCTCCGCCTACAA
CCTTCTCGTCCACCTTGTCCACCAGGCCTCCGACCCGGATATGTTCCTGT
CGCGCATCTGCACCTACCTCGCCAAACCCATCTCCTCCTCCCCTCAGTTC
GGCCCCTCCTTGGCCATCTCCATCCTGTCCACCATCTTCAACACGCTTGC
TCCCTCCGACTCCAGCCGCTACCACGTTCTCCTGGCTACCGTCGCCGTCA
TCCGCCAGTCCAGCTCGTCCATTGCCTTTGACGCCCTCAAGTCGCAGCTG
GCCACCCAGCTGCCCGGCTGGCTTGCCGCCTGGGAGCTGGACGCCGACGA
GGCCCAGCGCCTGCACCTCGCCATTGCCGATGCCGCCCAGGCGTCCGGTG
ACCCCGAGTTGGCTCAAACCCACGTCGTCCAGGCCCTGCAGACCATCCCT
GCCGCCAATGCCAGCGCCCCCGAGGCCCGCGATCTGGCCGTCCGCGCCCT
GACCTCCGCTCTCACCCACCCGGCTGTCTTCGACTTCACCCCGCTGACTG
CCTCCGACGCCGTCCAGGCCCTCCGGTCCAGCGACAGCACCCTCTTTGAG
CTGCTCGAGATCTTCACCGCCGATACCCTCGACGCCTACGAGGCCTTTGT
CTCCGCTACCCCTCTGGCCAGCATCTCCGGCGGCGTGCTGGCTGAGGCCG
GCGAGGCCCTGCAGAACAAGATGCGCCTGCTCACTCTGGCCTCCCTGGCC
GCTTCTACCCCGTCCCGCTCCCTTCCCTACGCCACCATTGCCACGGCCCT
CCGCGTGGAGCCCACCGACGTCGAGAAGTGGGTTATTGACACCATCCGCG
CCGGCCTCGTCGAGGGTAAGCTGTCGCAGCTGCGCTCCGAGTTCCTGGTC
CACCGGGCCACCTACCGTGTCTTTGGTGAGAAGCAGTGGGCCGAGGTGCA
GGGTCGCCTGATGGTCTGGCGCCGCAGCCTGGAGAACGTGCTGGGTGTTG
TTCGCAGCGAGCGGGAGCGCTTTGTTCGCGAGGGGCTGCAGGCGGCCCAG
GCTGCCGAGGAGGCTGCCCAGGGCAAGGGTAACGACAAGAAGGGTGGTGA
CCGTCGCCGTCACAACAACAACCAGAACCAGAACCAGCAGCAGCAGCAGC
AACAGCAGCAGCAAGCACCTTCGGCGCCCGCCGCTGCCCCGGAGGCTGTT
GCCGTGGAGTAAATGCCCGCCCCCTCCACCACCCTCCTCATCGAGGGTTC
TTTCACCGAGCTCGCCGACGAGTTCGCCCAGTACATCGACGCCCTGCGCA
AGTCCGAGGCCTCCAACAGCCTTCAGTCCGAGATTTCCCCGCTTCTGCAG
CCCCTTCGTGAGCAGGAACAGTCCGATGCAGAGCCCGACCGCAAGCAGCG
CGATGAGGTCCTCAAGAAGCTGGTCTCCGCGGCCGTTGTCCTGAACGGCG
CCCCCGAGAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001894KJC3_001894Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001894-T1KJC3_001894-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001894-T1.cdsKJC3_001894-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001894-T1.utr3p1KJC3_001894-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001894-T1.exon2KJC3_001894-T1.exon2Aspergillus niger KJC3exon
KJC3_001894-T1.exon1KJC3_001894-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001894-T1.utr5p1KJC3_001894-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027528
DBxrefInterPro:IPR040750
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
DBxrefPFAM:PF18005
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:981365..983454 -
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