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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:996837..1000316- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001901-T1 ID=KJC3_001901-T1|Name=KJC3_001901-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3480bp|location=Sequence derived from alignment at ch2:996837..1000316- (Aspergillus niger KJC3)
TATTTATCTGCAAGCTTTCAGTTTGCTCAGCCCATGCGGCGGTGATTAAT
ACGCAACGCCTCGAATGGGACGGGAAAGTTGGAAAGTTTCCGGTTTTCTG
ACCAGCGTCCACCCGGCAGAGCCGCCCGTAACCTTGGTCATCGATGGTAC
GGGCCACTTCTCCAGCCACTCTGCCTTCCTCGTGTTCGTCCTCCGGCTCG
TCTCTCCTTCTCTCTCCCTCTCTCTCCCTGTCTCTCTTCCTCTCTGTGTG
TATGTTGAATGTTATCAGACTTACCTTGGTTTCACGGTGAATATCTCCTC
GTTAGTTTTTTTTTTTCTGCTGTGATTGTATCATTACGTCTTCTTTGGAC
TTGTCTTTTGATAGAACACTTTTTTTTCCTTCCACCTGGAAGTCTGTTTC
GCTTTGACCGCCTGACCCAATCAGGAACGATCCCCGCGGCTGCTCCCTAG
GCGACCCGAAACCAACATTACAACCTTTCACAGTACTTTCCTTAGTATTA
CTGCTAACTAACTAACTAGTTATTCACCTCCTGCTTACTACGAACCAAGT
TAACTACACTACCTACAATATTATTCTCTGCCTGCCTGCCTGCCTGAACT
TCCCTCCTGTATCCATTCTGCCACTGTCTGTCTGCATCAGGTTTTATGCT
TCTCTCTCCACCTACTTCTTCTTCCTCTTTTTCTTCACCTCCTTTGGCGT
CTCTCTTTATTCACTCCACTCCGTAATAAACCCGGTCCCACCTCTTCCAT
TTCCCTTTTTAACGCTTCATCATCGCGCAATAGTCCTGGCTCTTTGGGGA
TTCTCGTTCATTGCTACATCCTTCCGCCAACAGTCCCTCTTCCCGTGTCC
CGAAAGCTCTCCATCTTTCCTCCCCATCCTTTTCCTCCTCCCCCTTGCCT
TCTTCTCTTTTCTACTTTCGAGAACTTCATGCTTTGCTGGAGATTCATGT
CACTTGTACATTGACCAGCTTTCGAACGACCTAGCTCTGCATAATTCTCC
TGACGTCGTTGCTTTGACAATCGCGGGTTCCAGCTTCCTTCCTGCAGCCT
AACCCAAGCATTGTCATTCCGCCGTACAACCCCGGTCTCATACGGCTTTC
CACCAGATGGACTAAAGTCCCCTCCACAACCCCCCCTCCTCCCACCAGAT
CCGGATTCAGATCGTGCGGGCGCTAGACTCAACCTTCTTCATCTGATTGC
AAGGCTGACCGCTATTTTTACTTCCTGCGAGGCCCGTATCTGTCTCTGTG
GGACCTCATTGTCTGACAAGACATCGCGCGAAGGCTGAACCTCCCGTCAG
CTTGCGCCACACTCGGTTTTAGGTGAGCGCCCCACGCAACAGTGCCTCTG
ATCATTGTTACTCGTTCTTCTGTCCTGCCTCATTGCTTTCTATATGTTCG
GTCCCTTCCTGTCTTTTCCTTGGCCGCCCTGGATCCTCCATGCCTCCCCA
CTCATCACCGGAAGAGAAAGACGACCCCTACTGACATGGCCTCTGTTGAC
TTAGCTTTCCCACACCTTCGCCAACCCTTTCAGGCTGGCGCGAAACATCC
ATTATCCATGGCTGCGTTGATGCAATCGAACAACGAACCCGTTACTATCT
CAAAACCATTGTCTGGGACATCGAACCCCGTAATATCTGCTCCATCGGAA
CCCCTCGCTTTCCTAAAACAGTCGAAACCTGATTCAAGCCTGTCCTCTAT
CGCCAGCGCTGGACTGAACGTCTCGCGCTCCGGAGATTCGCTGCCACCAA
TGACGACGACCGCGCCGCCGGCCACGGCTGGCCAGACAGACCGCCCGCTG
GAGCATGAGAAGGAGTCGGAACAGCACAGCTCACAAGTCGCGAGAGAGGC
CCTCGGTGCCAGCGAGAAGCAGACAAATCCCGTGAACGAAGGCATGCAAA
CTTCTTCAGACCAAATGCAAGTTGATTCACATTCGGGCCCGGGCAATGCG
TCTGATACGTTTGGGGCAGCCGATAACAACAACACACTTATCGATGCCTC
AACCGTAGCTAGTCCAGGTCCTATCGAGGATTCTGGCTCTGCAGATGGCG
ATCACCCTCGCCACCGTGATGAAGGAGAAATGCCGCAAGAAACAGGCAAC
AAAGCCTTCTCGTATCCGATGCCCACGGCCAGTTTTAATGACCCCCGTCG
TGGTCTCAGCTTACCTGGCTCTGGTTTTCACAAGGGCCAGCGATCACCGT
CGGCCAAAAAGCATCGTTGCCCATACTGTGCCACGGAGTTTACAAGGCAT
CATAATCTGAAGAGCCATCTGCTTACGCATAGTCAGGAAAAGCCATACGT
TTGCCAAACATGTCAATCGCGCTTCCGTCGGTTGCATGATCTAAAGAGAC
ATACAAAGCTTCATACTGGCGAAAGGCCCCATATTTGCCCTAAGTGCGGG
CGCAGGTTCGCCCGTGGCGACGCTCTAGCTCGCCACAACAAGGGCCAAGG
CGGATGCGCGGGGCGCAGAGCAAGCATGGGAAGCTACGTTCCCGAGGATG
AATATGGCGAGGCTCCGGCTCCTGGAGCCGCGGATGATACGATGGATGGA
CTTGTGTACACAGCTGAGCCAGAGCGCATGGATGAGGAAGAAGAGCGGCG
ACTCATGCCCAGCATCAAGAAGCATGATATGTCGACGGACTCCATTTCAC
GTTCGAACACTACGAGCTATCAACCGCGCCAGCCCAGCACATATCCTCCG
ATCGCTTCAGGCAGACCTTCCCCCGGGGGTCTCTTCCCTCCTCCAAGCCA
TGGTGGCTCTAGTGCATCAACGTCTCCCGTATCGCAATCCGGAAACATGA
CATTCCCACCGCCTGGTCAACCGTCAGGTGCATCCGTTTTCCCTACAAAT
ATCACGGGGAGCCCGAAGCCATTATCGCCAAATGCACTGTCATCGCATCA
GCTTGGCCATGGCCCGGAGAATAATATCCATCATCGTGCTCATTCGCCTG
GTATGGCTCAGTCGTTCCAGCAGCAGACATTCGGCAGGACAGGATCTTCC
TCAAGTTCCGTAACGAATCATGCTGCTTCAGGCTTGGGTCTGCCTCCACC
GCAACCGGGTGCTCCCCAGCTCCCGCCGCCCCCGGGGATGAACTCGGCTG
AATCTCGGTTTAGCCTTCACTCTCAAGGATCAGTGCCACCGGCGCCTTCG
ACGGCTACCAAACACATGACCCCTCACAATCACACAAATAACCACGGTGG
TCCACTACCGTCGAAACCTGGATCGGAAGGGGCCTCGAATAATGGCACCC
AGATCACTGGTCCTCATGAGTCCAATCTCATCGAGCAGTTCCGTGAGCGG
GAAGACAAGCTGTGGGCTTATGTCCGCTCGGTGCACGAAGAATTAAATGG
ACTTCGGACGGAAGTTGCCGCTCTAAGGGCCCAACTTGCATCAGCTAACG
TCAACGCGCTAGCAATGTCAAGCCAAAGTGCACCTCAGTCTCAACCCGAG
ACAAACGCTGCTGGTACATCCCAACGGTGA back to topCoding sequence (CDS) from alignment at ch2:996837..1000316- >KJC3_001901-T1 ID=KJC3_001901-T1|Name=KJC3_001901-T1|organism=Aspergillus niger KJC3|type=CDS|length=1923bp|location=Sequence derived from alignment at ch2:996837..1000316- (Aspergillus niger KJC3)
ATGGCTGCGTTGATGCAATCGAACAACGAACCCGTTACTATCTCAAAACC
ATTGTCTGGGACATCGAACCCCGTAATATCTGCTCCATCGGAACCCCTCG
CTTTCCTAAAACAGTCGAAACCTGATTCAAGCCTGTCCTCTATCGCCAGC
GCTGGACTGAACGTCTCGCGCTCCGGAGATTCGCTGCCACCAATGACGAC
GACCGCGCCGCCGGCCACGGCTGGCCAGACAGACCGCCCGCTGGAGCATG
AGAAGGAGTCGGAACAGCACAGCTCACAAGTCGCGAGAGAGGCCCTCGGT
GCCAGCGAGAAGCAGACAAATCCCGTGAACGAAGGCATGCAAACTTCTTC
AGACCAAATGCAAGTTGATTCACATTCGGGCCCGGGCAATGCGTCTGATA
CGTTTGGGGCAGCCGATAACAACAACACACTTATCGATGCCTCAACCGTA
GCTAGTCCAGGTCCTATCGAGGATTCTGGCTCTGCAGATGGCGATCACCC
TCGCCACCGTGATGAAGGAGAAATGCCGCAAGAAACAGGCAACAAAGCCT
TCTCGTATCCGATGCCCACGGCCAGTTTTAATGACCCCCGTCGTGGTCTC
AGCTTACCTGGCTCTGGTTTTCACAAGGGCCAGCGATCACCGTCGGCCAA
AAAGCATCGTTGCCCATACTGTGCCACGGAGTTTACAAGGCATCATAATC
TGAAGAGCCATCTGCTTACGCATAGTCAGGAAAAGCCATACGTTTGCCAA
ACATGTCAATCGCGCTTCCGTCGGTTGCATGATCTAAAGAGACATACAAA
GCTTCATACTGGCGAAAGGCCCCATATTTGCCCTAAGTGCGGGCGCAGGT
TCGCCCGTGGCGACGCTCTAGCTCGCCACAACAAGGGCCAAGGCGGATGC
GCGGGGCGCAGAGCAAGCATGGGAAGCTACGTTCCCGAGGATGAATATGG
CGAGGCTCCGGCTCCTGGAGCCGCGGATGATACGATGGATGGACTTGTGT
ACACAGCTGAGCCAGAGCGCATGGATGAGGAAGAAGAGCGGCGACTCATG
CCCAGCATCAAGAAGCATGATATGTCGACGGACTCCATTTCACGTTCGAA
CACTACGAGCTATCAACCGCGCCAGCCCAGCACATATCCTCCGATCGCTT
CAGGCAGACCTTCCCCCGGGGGTCTCTTCCCTCCTCCAAGCCATGGTGGC
TCTAGTGCATCAACGTCTCCCGTATCGCAATCCGGAAACATGACATTCCC
ACCGCCTGGTCAACCGTCAGGTGCATCCGTTTTCCCTACAAATATCACGG
GGAGCCCGAAGCCATTATCGCCAAATGCACTGTCATCGCATCAGCTTGGC
CATGGCCCGGAGAATAATATCCATCATCGTGCTCATTCGCCTGGTATGGC
TCAGTCGTTCCAGCAGCAGACATTCGGCAGGACAGGATCTTCCTCAAGTT
CCGTAACGAATCATGCTGCTTCAGGCTTGGGTCTGCCTCCACCGCAACCG
GGTGCTCCCCAGCTCCCGCCGCCCCCGGGGATGAACTCGGCTGAATCTCG
GTTTAGCCTTCACTCTCAAGGATCAGTGCCACCGGCGCCTTCGACGGCTA
CCAAACACATGACCCCTCACAATCACACAAATAACCACGGTGGTCCACTA
CCGTCGAAACCTGGATCGGAAGGGGCCTCGAATAATGGCACCCAGATCAC
TGGTCCTCATGAGTCCAATCTCATCGAGCAGTTCCGTGAGCGGGAAGACA
AGCTGTGGGCTTATGTCCGCTCGGTGCACGAAGAATTAAATGGACTTCGG
ACGGAAGTTGCCGCTCTAAGGGCCCAACTTGCATCAGCTAACGTCAACGC
GCTAGCAATGTCAAGCCAAAGTGCACCTCAGTCTCAACCCGAGACAAACG
CTGCTGGTACATCCCAACGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:996837..1000316 - |
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