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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1612939..1615908+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002079-T1 ID=KJC3_002079-T1|Name=KJC3_002079-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2970bp|location=Sequence derived from alignment at ch2:1612939..1615908+ (Aspergillus niger KJC3) TTTCATCATTCCCCAGGCTCCCATCTCCTCCCAATAACCCCCTCCCATAT
TCAGAATCCTTCTATATCTTCTACAGGTTGATACCCGCCAAATCTGAATT
ATACCCTGTTGTGACGCTCCTCCGTCACCATGTCCGAAACCCTGTTGAAG
CCGGAGAAGGACTTCTCCAAGGATGCTGACAAGCTGATCCCCGAGGCTGA
GCAGCTTGCTAAGGTCGGAGCTCTCCCTTTATTTCTGCAAACGTAACTTA
CTGACCGTCAACAGACCGATGTTCAGGGTGCCATTGACAAGCTCCTTGTA
TTGGAGAAGCAAGCAAGACAAGTATGGTCCTTCCTTCGTCTGTCTGGCGA
CAACGCAATTCTTACCCATCCTACAGGCTTCGGATCTTGCCACGACATCG
CGCATCCTTATCACCATCGTCACAATCAGCAAAAACTCGGGAGACTGGAA
CTTGCTGAACGACCAGGTCCTCCTGCTATCCAAGAAGCATGGCCAGCTCA
AGCAGGCCGTAACGAAGATGGTCCAGACGGTGATGGGATTCCTGGATGAG
ACGCCGAACTTGGAGGTCAAGCTGTCTGTCATTCACACGCTGCGGACTGT
GACTGAGGGCAAGGTCAGTGCAATAACCACCTAGTCAGCTCCGCATCATG
CTGATGCGCGTCTAAATAGATCTTCGTCGAAGTCGAGAGAGCCCGCGTTA
CCCGCATCCTTTCCAACATCAAAAAGACCCAAGGCGACCTTAATGCCGCC
GCCGATATTCTTTGCGAGTTGCAAGTCGAGACATTCGGTTCCATGACCAG
ACGGGAGAAGACAGAGTTCATCCTGGAGCAGGTTGCTCTCTGCATAGAGC
GGGGCGACTGGACACAGGCCACCATCCTCAGCCGCAAGATCAACAAGAGA
TACTTCAACCGCAAGCCGAAGAAGAGCCCGGAGGAAATTGAGAAGCTGAA
GAAGGAAGCCGAAGAGAAGGAGAAGACTCGTAGCCCGGATGAGGCACCAA
TGGAGGTGGACGATGACGTGACCGACTTGAAGCTTCGCTACTACGAACAA
CAGATTATCCTCGCCAACCACGACTACAAATACCTGGATGTTTGCAAACA
CTACCGGGAAGTGCTGGATACGGAGTCGGTGGAGAACAACCCGGAGCAAC
TTCGCGCCGTAAGTTTACCTTGGGTGGTTAATTAGTACCTTCAAGCTGAC
ATCGTCTAGGTTCTCGCTAGAATTGTCTACTATATCGTCTTGTCTCCCTA
CGATAACGAGCAATCGGATCTGCTGCACCGCATTCAGCAAGACTCGCGGC
TCTCTCTCGTCCCAGTTGAAGGCCGGCTAGTGAAGCTCTTCACCATCCAC
GAGCTGATGCGCTGGCCGATGGTGGGCGAGCAATTTGGCCCTCACCTCTG
CAACACGGATGTCTTCAGCCCTCAGCCCAACCAATCGGTCGAGGACCAGG
CGCATCGGAGGTGGCAGGATCTCCGCAAGCGCGTGATCGAGCATAACGTG
CGGGTGGTGGCCAAGTACTACACACGTATCCAGATGGGCCGGTTGACCGA
ACTGTTGGACCTGACGGAGGAGGAAACGGAGAAGTACATCAGCGAGCTGG
TCTGCTCGAAGACAATCTACGCCAAGATCGACCGTCCAGCCCGACTGGTC
AACTTCGCCAAGCCGCGCGATGCCGACGACGTGCTGAACGAATGGAGCAG
CGACATGAAGAGCCTTCTGGGGCTGCTGGAGCGGATCGACCATCTGATCA
CGAAGGAGGAGATGATGGCGCGGATCCTTCCCACGCGAGAGAAGGGCAAG
GCCCGGTAGATTACTGAGTAGCAGAACCGCAGATATACACTGATGAAGTA
GAATGGGACAATAATGACATCGTCATATACATACATTGCATTCCTCTATA
CAACTAATCTACTCTATCTATATTCTAGAAAGGCAGCTCCATCTCATTAA
CATCCACTTCCTCCTTCTCCTTCTTTCCCCCATTTCCATTGAAATCCCCA
ACAACGCCCCTCACAAACCCCACCACAGCATCAAGATACGGCCTCTGCGC
CGGCACAAAATGGCCTCCGGGATGCACCACCACTCTCCCCTCCACATCCT
TCGCATCACAAACCTCCACCAACGCCTTACTCCTCCCCTCATCCACGACC
GCATCCAACGACCCCAAAACATGCAACACGGGCGTCTTCACCCCACCCTC
ATAAAACCCTCTATACCTCGGCCCCGGCGCCCTAAACCCACTATAACAAA
CCGCGAACTTCAACGGCGCCTGCCCTACACTCCTCACATTCTCCCACCAG
ACACTCGGCACCTCAAAGCCCTTCACATTCTCCCCCGTTTCCTCAAAGAC
ACTCCCCTCGCTCGCAAACTTATTGATAACCTCCTCCCTCCCGGGCTCCA
ACAACGCCGCCACAATCGCCGCCATCGCTGCGCCCTGCGAGAACCCCACT
ACGCCGTCGAACGGCCCCTCGGTCTTGATGACGTTGGCGATCGTCTCTAG
TCCCAAATGCAGGTCTGTATAGAGGGGTGGATTCGCGGTGGAGGAGCGCC
GGAACCAGCCGTAGGCTTCTGTTGGTTCATCGTTGGTGCCGCCTTGGTTT
GTGGATGGTTCGTAGCCCGGGATATCGGAGGGGAGGAGGTGGATGGGACC
AGTTGGGTAGGTGGTTGTGATTGTGTAGCCGGTCGTGGGGAGAAGGGTCT
TGGTGAGGTGTTTTATGACGGCGCGGGATTTGGCGTGGAAGAGGGTGCCG
GATTGCGTGTAGCCGTGGAGGCAGAGGAGTTTGAGGGGGGGCATGATTTT
TTTTTTATTTCTCTTTGACTGGGAACTTTGGTTTCTTTGTGTGAAGGGGG
TGGTGTTGGGGGTAGAAAAGAGTGTAATAGGAGAAGTAATATATGGGAGT
AGTGTATTGAGGACGATGGATGTCGGGGAGAGAAAAAGTACTAGTGGGAG
GGAGGATGAGAGGAGATAAG back to topCoding sequence (CDS) from alignment at ch2:1612939..1615908+ >KJC3_002079-T1 ID=KJC3_002079-T1|Name=KJC3_002079-T1|organism=Aspergillus niger KJC3|type=CDS|length=7335bp|location=Sequence derived from alignment at ch2:1612939..1615908+ (Aspergillus niger KJC3) ATGTCCGAAACCCTGTTGAAGCCGGAGAAGGACTTCTCCAAGGATGCTGA CAAGCTGATCCCCGAGGCTGAGCAGCTTGCTAAGACCGATGTTCAGGGTG CCATTGACAAGCTCCTTGTATTGGAGAAGCAAGCAAGACAAGCTTCGGAT CTTGCCACGACATCGCGCATCCTTATCACCATCGTCACAATCAGCAAAAA CTCGGGAGACTGGAACTTGCTGAACGACCAGGTCCTCCTGCTATCCAAGA AGCATGGCCAGCTCAAGCAGGCCGTAACGAAGATGGTCCAGACGGTGATG GGATTCCTGGATGAGACGCCGAACTTGGAGGTCAAGCTGTCTGTCATTCA CACGCTGCGGACTGTGACTGAGGGCAAGATCTTCGTCGAAGTCGAGAGAG CCCGCGTTACCCGCATCCTTTCCAACATCAAAAAGACCCAAGGCGACCTT AATGCCGCCGCCGATATTCTTTGCGAGTTGCAAGTCGAGACATTCGGTTC CATGACCAGACGGGAGAAGACAGAGTTCATCCTGGAGCAGGTTGCTCTCT GCATAGAGCGGGGCGACTGGACACAGGCCACCATCCTCAGCCGCAAGATC AACAAGAGATACTTCAACCGCAAGCCGAAGAAGAGCCCGGAGGAAATTGA GAAGCTGAAGAAGGAAGCCGAAGAGAAGGAGAAGACTCGTAGCCCGGATG AGGCACCAATGGAGGTGGACGATGACGTGACCGACTTGAAGCTTCGCTAC TACGAACAACAGATTATCCTCGCCAACCACGACTACAAATACCTGGATGT TTGCAAACACTACCGGGAAGTGCTGGATACGGAGTCGGTGGAGAACAACC CGGAGCAACTTCGCGCCGTTCTCGCTAGAATTGTCTACTATATCGTCTTG TCTCCCTACGATAACGAGCAATCGGATCTGCTGCACCGCATTCAGCAAGA CTCGCGGCTCTCTCTCGTCCCAGTTGAAGGCCGGCTAGTGAAGCTCTTCA CCATCCACGAGCTGATGCGCTGGCCGATGGTGGGCGAGCAATTTGGCCCT CACCTCTGCAACACGGATGTCTTCAGCCCTCAGCCCAACCAATCGGTCGA GGACCAGGCGCATCGGAGGTGGCAGGATCTCCGCAAGCGCGTGATCGAGC ATAACGTGCGGGTGGTGGCCAAGTACTACACACGTATCCAGATGGGCCGG TTGACCGAACTGTTGGACCTGACGGAGGAGGAAACGGAGAAGTACATCAG CGAGCTGGTCTGCTCGAAGACAATCTACGCCAAGATCGACCGTCCAGCCC GACTGGTCAACTTCGCCAAGCCGCGCGATGCCGACGACGTGCTGAACGAA TGGAGCAGCGACATGAAGAGCCTTCTGGGGCTGCTGGAGCGGATCGACCA TCTGATCACGAAGGAGGAGATGATGGCGCGGATCCTTCCCACGCGAGAGA AGGGCAAGGCCCGGTAGATGTCCGAAACCCTGTTGAAGCCGGAGAAGGAC TTCTCCAAGGATGCTGACAAGCTGATCCCCGAGGCTGAGCAGCTTGCTAA GACCGATGTTCAGGGTGCCATTGACAAGCTCCTTGTATTGGAGAAGCAAG CAAGACAAGCTTCGGATCTTGCCACGACATCGCGCATCCTTATCACCATC GTCACAATCAGCAAAAACTCGGGAGACTGGAACTTGCTGAACGACCAGGT CCTCCTGCTATCCAAGAAGCATGGCCAGCTCAAGCAGGCCGTAACGAAGA TGGTCCAGACGGTGATGGGATTCCTGGATGAGACGCCGAACTTGGAGGTC AAGCTGTCTGTCATTCACACGCTGCGGACTGTGACTGAGGGCAAGATCTT CGTCGAAGTCGAGAGAGCCCGCGTTACCCGCATCCTTTCCAACATCAAAA AGACCCAAGGCGACCTTAATGCCGCCGCCGATATTCTTTGCGAGTTGCAA GTCGAGACATTCGGTTCCATGACCAGACGGGAGAAGACAGAGTTCATCCT GGAGCAGGTTGCTCTCTGCATAGAGCGGGGCGACTGGACACAGGCCACCA TCCTCAGCCGCAAGATCAACAAGAGATACTTCAACCGCAAGCCGAAGAAG AGCCCGGAGGAAATTGAGAAGCTGAAGAAGGAAGCCGAAGAGAAGGAGAA GACTCGTAGCCCGGATGAGGCACCAATGGAGGTGGACGATGACGTGACCG ACTTGAAGCTTCGCTACTACGAACAACAGATTATCCTCGCCAACCACGAC TACAAATACCTGGATGTTTGCAAACACTACCGGGAAGTGCTGGATACGGA GTCGGTGGAGAACAACCCGGAGCAACTTCGCGCCGTTCTCGCTAGAATTG TCTACTATATCGTCTTGTCTCCCTACGATAACGAGCAATCGGATCTGCTG CACCGCATTCAGCAAGACTCGCGGCTCTCTCTCGTCCCAGTTGAAGGCCG GCTAGTGAAGCTCTTCACCATCCACGAGCTGATGCGCTGGCCGATGGTGG GCGAGCAATTTGGCCCTCACCTCTGCAACACGGATGTCTTCAGCCCTCAG CCCAACCAATCGGTCGAGGACCAGGCGCATCGGAGGTGGCAGGATCTCCG CAAGCGCGTGATCGAGCATAACGTGCGGGTGGTGGCCAAGTACTACACAC GTATCCAGATGGGCCGGTTGACCGAACTGTTGGACCTGACGGAGGAGGAA ACGGAGAAGTACATCAGCGAGCTGGTCTGCTCGAAGACAATCTACGCCAA GATCGACCGTCCAGCCCGACTGGTCAACTTCGCCAAGCCGCGCGATGCCG ACGACGTGCTGAACGAATGGAGCAGCGACATGAAGAGCCTTCTGGGGCTG CTGGAGCGGATCGACCATCTGATCACGAAGGAGGAGATGATGGCGCGGAT CCTTCCCACGCGAGAGAAGGGCAAGGCCCGGTAGATGTCCGAAACCCTGT TGAAGCCGGAGAAGGACTTCTCCAAGGATGCTGACAAGCTGATCCCCGAG GCTGAGCAGCTTGCTAAGACCGATGTTCAGGGTGCCATTGACAAGCTCCT TGTATTGGAGAAGCAAGCAAGACAAGCTTCGGATCTTGCCACGACATCGC GCATCCTTATCACCATCGTCACAATCAGCAAAAACTCGGGAGACTGGAAC TTGCTGAACGACCAGGTCCTCCTGCTATCCAAGAAGCATGGCCAGCTCAA GCAGGCCGTAACGAAGATGGTCCAGACGGTGATGGGATTCCTGGATGAGA CGCCGAACTTGGAGGTCAAGCTGTCTGTCATTCACACGCTGCGGACTGTG ACTGAGGGCAAGATCTTCGTCGAAGTCGAGAGAGCCCGCGTTACCCGCAT CCTTTCCAACATCAAAAAGACCCAAGGCGACCTTAATGCCGCCGCCGATA TTCTTTGCGAGTTGCAAGTCGAGACATTCGGTTCCATGACCAGACGGGAG AAGACAGAGTTCATCCTGGAGCAGGTTGCTCTCTGCATAGAGCGGGGCGA CTGGACACAGGCCACCATCCTCAGCCGCAAGATCAACAAGAGATACTTCA ACCGCAAGCCGAAGAAGAGCCCGGAGGAAATTGAGAAGCTGAAGAAGGAA GCCGAAGAGAAGGAGAAGACTCGTAGCCCGGATGAGGCACCAATGGAGGT GGACGATGACGTGACCGACTTGAAGCTTCGCTACTACGAACAACAGATTA TCCTCGCCAACCACGACTACAAATACCTGGATGTTTGCAAACACTACCGG GAAGTGCTGGATACGGAGTCGGTGGAGAACAACCCGGAGCAACTTCGCGC CGTTCTCGCTAGAATTGTCTACTATATCGTCTTGTCTCCCTACGATAACG AGCAATCGGATCTGCTGCACCGCATTCAGCAAGACTCGCGGCTCTCTCTC GTCCCAGTTGAAGGCCGGCTAGTGAAGCTCTTCACCATCCACGAGCTGAT GCGCTGGCCGATGGTGGGCGAGCAATTTGGCCCTCACCTCTGCAACACGG ATGTCTTCAGCCCTCAGCCCAACCAATCGGTCGAGGACCAGGCGCATCGG AGGTGGCAGGATCTCCGCAAGCGCGTGATCGAGCATAACGTGCGGGTGGT GGCCAAGTACTACACACGTATCCAGATGGGCCGGTTGACCGAACTGTTGG ACCTGACGGAGGAGGAAACGGAGAAGTACATCAGCGAGCTGGTCTGCTCG AAGACAATCTACGCCAAGATCGACCGTCCAGCCCGACTGGTCAACTTCGC CAAGCCGCGCGATGCCGACGACGTGCTGAACGAATGGAGCAGCGACATGA AGAGCCTTCTGGGGCTGCTGGAGCGGATCGACCATCTGATCACGAAGGAG GAGATGATGGCGCGGATCCTTCCCACGCGAGAGAAGGGCAAGGCCCGGTA GATGTCCGAAACCCTGTTGAAGCCGGAGAAGGACTTCTCCAAGGATGCTG ACAAGCTGATCCCCGAGGCTGAGCAGCTTGCTAAGACCGATGTTCAGGGT GCCATTGACAAGCTCCTTGTATTGGAGAAGCAAGCAAGACAAGCTTCGGA TCTTGCCACGACATCGCGCATCCTTATCACCATCGTCACAATCAGCAAAA ACTCGGGAGACTGGAACTTGCTGAACGACCAGGTCCTCCTGCTATCCAAG AAGCATGGCCAGCTCAAGCAGGCCGTAACGAAGATGGTCCAGACGGTGAT GGGATTCCTGGATGAGACGCCGAACTTGGAGGTCAAGCTGTCTGTCATTC ACACGCTGCGGACTGTGACTGAGGGCAAGATCTTCGTCGAAGTCGAGAGA GCCCGCGTTACCCGCATCCTTTCCAACATCAAAAAGACCCAAGGCGACCT TAATGCCGCCGCCGATATTCTTTGCGAGTTGCAAGTCGAGACATTCGGTT CCATGACCAGACGGGAGAAGACAGAGTTCATCCTGGAGCAGGTTGCTCTC TGCATAGAGCGGGGCGACTGGACACAGGCCACCATCCTCAGCCGCAAGAT CAACAAGAGATACTTCAACCGCAAGCCGAAGAAGAGCCCGGAGGAAATTG AGAAGCTGAAGAAGGAAGCCGAAGAGAAGGAGAAGACTCGTAGCCCGGAT GAGGCACCAATGGAGGTGGACGATGACGTGACCGACTTGAAGCTTCGCTA CTACGAACAACAGATTATCCTCGCCAACCACGACTACAAATACCTGGATG TTTGCAAACACTACCGGGAAGTGCTGGATACGGAGTCGGTGGAGAACAAC CCGGAGCAACTTCGCGCCGTTCTCGCTAGAATTGTCTACTATATCGTCTT GTCTCCCTACGATAACGAGCAATCGGATCTGCTGCACCGCATTCAGCAAG ACTCGCGGCTCTCTCTCGTCCCAGTTGAAGGCCGGCTAGTGAAGCTCTTC ACCATCCACGAGCTGATGCGCTGGCCGATGGTGGGCGAGCAATTTGGCCC TCACCTCTGCAACACGGATGTCTTCAGCCCTCAGCCCAACCAATCGGTCG AGGACCAGGCGCATCGGAGGTGGCAGGATCTCCGCAAGCGCGTGATCGAG CATAACGTGCGGGTGGTGGCCAAGTACTACACACGTATCCAGATGGGCCG GTTGACCGAACTGTTGGACCTGACGGAGGAGGAAACGGAGAAGTACATCA GCGAGCTGGTCTGCTCGAAGACAATCTACGCCAAGATCGACCGTCCAGCC CGACTGGTCAACTTCGCCAAGCCGCGCGATGCCGACGACGTGCTGAACGA ATGGAGCAGCGACATGAAGAGCCTTCTGGGGCTGCTGGAGCGGATCGACC ATCTGATCACGAAGGAGGAGATGATGGCGCGGATCCTTCCCACGCGAGAG AAGGGCAAGGCCCGGTAGATGTCCGAAACCCTGTTGAAGCCGGAGAAGGA CTTCTCCAAGGATGCTGACAAGCTGATCCCCGAGGCTGAGCAGCTTGCTA AGACCGATGTTCAGGGTGCCATTGACAAGCTCCTTGTATTGGAGAAGCAA GCAAGACAAGCTTCGGATCTTGCCACGACATCGCGCATCCTTATCACCAT CGTCACAATCAGCAAAAACTCGGGAGACTGGAACTTGCTGAACGACCAGG TCCTCCTGCTATCCAAGAAGCATGGCCAGCTCAAGCAGGCCGTAACGAAG ATGGTCCAGACGGTGATGGGATTCCTGGATGAGACGCCGAACTTGGAGGT CAAGCTGTCTGTCATTCACACGCTGCGGACTGTGACTGAGGGCAAGATCT TCGTCGAAGTCGAGAGAGCCCGCGTTACCCGCATCCTTTCCAACATCAAA AAGACCCAAGGCGACCTTAATGCCGCCGCCGATATTCTTTGCGAGTTGCA AGTCGAGACATTCGGTTCCATGACCAGACGGGAGAAGACAGAGTTCATCC TGGAGCAGGTTGCTCTCTGCATAGAGCGGGGCGACTGGACACAGGCCACC ATCCTCAGCCGCAAGATCAACAAGAGATACTTCAACCGCAAGCCGAAGAA GAGCCCGGAGGAAATTGAGAAGCTGAAGAAGGAAGCCGAAGAGAAGGAGA AGACTCGTAGCCCGGATGAGGCACCAATGGAGGTGGACGATGACGTGACC GACTTGAAGCTTCGCTACTACGAACAACAGATTATCCTCGCCAACCACGA CTACAAATACCTGGATGTTTGCAAACACTACCGGGAAGTGCTGGATACGG AGTCGGTGGAGAACAACCCGGAGCAACTTCGCGCCGTTCTCGCTAGAATT GTCTACTATATCGTCTTGTCTCCCTACGATAACGAGCAATCGGATCTGCT GCACCGCATTCAGCAAGACTCGCGGCTCTCTCTCGTCCCAGTTGAAGGCC GGCTAGTGAAGCTCTTCACCATCCACGAGCTGATGCGCTGGCCGATGGTG GGCGAGCAATTTGGCCCTCACCTCTGCAACACGGATGTCTTCAGCCCTCA GCCCAACCAATCGGTCGAGGACCAGGCGCATCGGAGGTGGCAGGATCTCC GCAAGCGCGTGATCGAGCATAACGTGCGGGTGGTGGCCAAGTACTACACA CGTATCCAGATGGGCCGGTTGACCGAACTGTTGGACCTGACGGAGGAGGA AACGGAGAAGTACATCAGCGAGCTGGTCTGCTCGAAGACAATCTACGCCA AGATCGACCGTCCAGCCCGACTGGTCAACTTCGCCAAGCCGCGCGATGCC GACGACGTGCTGAACGAATGGAGCAGCGACATGAAGAGCCTTCTGGGGCT GCTGGAGCGGATCGACCATCTGATCACGAAGGAGGAGATGATGGCGCGGA TCCTTCCCACGCGAGAGAAGGGCAAGGCCCGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_002079-T1.utr5p1 | KJC3_002079-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_002079-T1.utr3p1 | KJC3_002079-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG09262P1W |
DBxref | InterPro:IPR036390 |
DBxref | InterPro:IPR040896 |
DBxref | InterPro:IPR036388 |
DBxref | InterPro:IPR000717 |
DBxref | PFAM:PF18098 |
DBxref | PFAM:PF01399 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch2 | supercontig | ch2:1612939..1615908 + |
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