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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1741691..1746448- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002124-T2 ID=KJC3_002124-T2|Name=KJC3_002124-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4758bp|location=Sequence derived from alignment at ch2:1741691..1746448- (Aspergillus niger KJC3)
ATTCCACTTGGTGTTCCGGAGACGCGAGCCGATTTCCGCCCAACCTGTGG
CGAGACCAAACCCGGCAGTTAACTCCAGCCTACCACACTGCGCCCTTGAC
CGGCTCTGGGTCCCTCCCGGCCAACAAGCGTTAAGCTGTTGCTATGAATC
TGTCACACCAAAACCCGCCCTTGTCCACTATTATTGTTCTCTCCTGGTCT
ATAGTGACCCCTATGCCCGGTGCTCGCTAATCAGGAGTGTTTGCCCGTAT
TTGCTGTTGCTGGGTTTGTCCGTGCTATTGAGGGTTGGGACCAAGGGGGC
TGACAAGTTTTCTCGCCTCGCCTCGTCTTGTCTCTTTGACAATGAGCGAC
AACAGCCGGCCACCTCCTTTCCCTTATCCCTCTTATCCCTCATCCACCTC
CTCCGACTTACCGGACAGTGAACCCAAGTATCATAGCTGGCCGGTGCCTC
AGTACTCGCAGCCAGCTTCTCTTGTTCCGCCGGTGTCTTATGAGCCCGTC
CCCGTCAGTCATGCTGAAAACCCCGCGGCTGGCGCCTCCCGGAGCGCTCC
TGGAGATCGCTCGGGGAACTCCAAGGTGGCCATCCCCCGGACTGTGAGCA
CAAGCACCTGGACCAGCAGTGGTCGAGTCAGCCGGGCTTGTGAGAACTGT
CGTGATCAAAAGGCCAAATGTAGCGGTCACCGCCCGACTTGCCAGCGTTG
CCAGGAGTCGGGGATCCGCTGCTCCTATGGGGATCGGAAACGCGAAAAGA
TGGCCAAGTGCGTTCCGTGACTGCTTATACGTTCATCGAGGAATATCTCT
AACGGTGGGTACTAGGCAGCTCAGTGATCTGACGACTCAAGTTCAGGTAT
ACGAAGCGGTCTTGCGAGAGATTGCTCCCAAGTTGGACTCGCAGACGGCC
CAGTACGTCGAACGAATTTTGCACGATGTAAGATCTCCCTAACTTATCTC
TACTGCCCCAAACTCTCCCGCTCTTTACAAGTCTTCTCCCCTTGTCTTCA
CCCCCTCTAGTGCCCATGCCCAGCCCTCTTTAACATGAAGAACCCCATGA
CAGCAAAGAGACGACCATGAGCAGCTCGGTGGCCTTCATGCGTCATCATC
ATCATCATCATCATCATCGGCCACCAAAATAGCCGATGCAGCCCTCCTGG
GACATCCTTCCCCAGGGTCTTCGCTGGCAGCTCTAGACTACACCAACGAA
GATTTTAACCGTGACGAGAAGATACAAGCCATGGGCTTTGTGGGCGAACA
TTCCGAAATCGCCTGGATGTACAGACTGAAGCGCCTCCTAGAACGATCGA
ACTCCGCCTCCCCCCGAGAGACCTGGGATCGACATTCGGTCTCTTCCGTC
AATTTTTTCCTAGACGACTCGGATATCCCAGTTATTGATGATGTTGATCC
GTCTCAACGACCCCCTGTTGCGGTTGCTGACCAACTTGTCGACGGCTATT
TTCACGCCGTCCATCCAACGTTTCCAATCGTGGGCAAGATGATCTTTCTG
GCACAGTACAAGTCTTTCTACTCGGCTCCCCATGTACGGCCGGGAAAACG
ATGGCTTGCGATACTAAATCTGATCTTCGCTGTCGCTGCGAAACATGCGC
GTCATTTGTATAATGATGCTGGCAACGGGATCGACGACAGTCTTGTCTAC
TTCTCACGAGCGTGGAAGCTTAGCATGAGTGATACAGCTCTGCTAGAGCA
CCCGAATCTGCAGCAAGTACAAGTGGAGGGGCTGACTTCCTTTTATTTAA
TGTCTATAGGACAAGTCAACAGGTACGGCCCTTCCCCTGGTCTCACCCCT
TTTTGTTTCTGGGCACGTTTTCTGGATTCCTTAGTGGCGATTGCCTGCGA
TTTTCGCATCCTTATCTGATTCAACGACACCCAATTTGCAGGTCCTGGAG
AATCTGTGGTATCTCTATCCGTTCGGCTGTCACGATGGGGTTGAACCTGC
GGAGTGAGAGCAATTCCATTGTCCACGTGTCCAAGGAGACGCGTTATCGG
GTTTGGTGGTCTCTCTATATGCTGGATAACTCACTCTGTGTCATGACGGG
TCGCCCACCGAGCACCAATGACGTTTTCTGCACCACGCCGCTGCCAGTAC
CTTTCAAGGAGGAAGAATTCATGGATAACAAGGTCGTTCAACTGATAGCT
GATCATGAAGCTCGAAATATTTTCATGGAAACCTTCTGTTTACGGGTTCC
TGGAAAAGCCCCCGACAGTGCGGGCACGCCCGATTCCTACCGACTACAAA
TGTCTCCTTATGGGAAACAAAGTGACCAGGTCGCTGCTGGCGCCATCGAA
GCGCTCACCCCGAACACTTCGCTTTACTTTCTTTATCATATTGACCTAGC
GCTGATCATGCGAGAGTCTGTTGACCTATTGTATGCTCCAGGGGCAGCTC
GAAAGTCATGGCGGGAGATCGAGGGGTCCATCTCCATGCTGCATGGCAAG
GTTGAAGCCTGGCTGTCCAGGCTCCCGCCCGCCTTCCACTTCACGAAAGG
GGCGCCGGCGTTCGAAAGGCAACGGGCAAGCCTGGCATTTCGCTTTTGCA
GCACCAAGATGCTCATTACGCAACCGTGCCTAAGCCGTCTCGCCCAACAA
AATCACGGCAATGACCCACCGGGACGGTTCTGCGAGACCATGGCAACCGT
GTGTGTTGACCTCGCAGGTCAGATGCTCGACTTGCTGCCCGAATCCCCGG
ACTTGGCCTGGGTCTATGGTGTTTCTCCCTGGTGGTGCATATTACATTAT
CTGATGCAGTCGACTACCGTCCTCATCATGGAATTGCTGCTCATGACCAA
GCCGGGGAGTGCCAAGTTTCGGCGGGTGTTGGTGCAGGTGTCTAAGGCGA
CCGGCTGGCTAGCGGAAATGTCGACGAAAGATCCATCCTCCCAAAGAGCC
TGGCTGGTGTGTAAGGATCTTATCGCTGAGCATGCCCCCGAACTCGGTGG
CATCGCCAGCCCCGCCGACCGCAGCAAATCCTGACTGTCCGCACGGTCTA
AACAAACATTCCATGATGATCCCTCCCAACCCACCTTGCGTTTCCGAAAC
AAGACCGATGGCTGACCGAGGGCCCTTATCCAGTGATGCAAACTTGGACT
GACCCGCTGTAGCGGGTTTCCCACCTCCCGCCACAGAGTGGTGACTAGGA
TCGCGTGCTGACCAGAATGTCTTGGTCGAGGGGAAATTGTTTGCTTCGAC
TTGGGTCGTTGTCTAGTCTATGTCCCTCCACCATCTATGATCATTGGACC
ACTAAACTGGTACTTGAGTAGGTCTCGTTGACATTCCACTTTTTATCATG
ACTATTTGATTTCCTTTTCCTTCGATCTTATTTTCTTATTCCTCCCTGTT
TCTACTCCTGCCCCGTGTCCCCTCTATAGATTGGAACAGGCTATCTATGA
TGGTCAATAGATGTAGACAACCCCAGCTCTGCAGCGATGAAATTCGAGGA
GGGGATCTACATAGCGCAAGCCTTGTCTTAAGTCGCAACCCTTCCGTGGC
GTTTCAGTCCGTATGGGTCTTGCCTCTTTTTGACAGTTTCTATTCCCGAA
TGACTGTTGCAGCTTTCTACAATCCGATGGCGCCCCCTCCCCCCCCCCCC
TCCCTTCCTTTTCTTTTTTTTTTTTTTTTTTTTATCCACCTGGGAGACGA
GGCTAGTTTGTCAGAGAAAAAGAAAACGACCCCCGCAGGATAGTAGAATT
GATCGTCAAGCCCGAAGTGCAGGGCATCAGGCGAACTTTGTCCTAATCGG
GCTACGGTCCGAACTTGATTCCGCCTTTATTGGGCATCGATCCGATATTG
GAGACGCCCTGGAAGGAGACGTGTCTTGATTGGTCCGACATTGGCTGGGA
TCCAATTTTATGTCGATGTGAAGTTCGAGTCTTTGGAATAATCTCGTTGA
TCTTGTTTATCTCTCTACCGCATTGAATGTGGAGTGGTCTTTTTCTATTT
CATTGGAGGTTGAGGTTCGTAAGATGACTTGCCTTCCTGCGCGGCTGGGA
ATGCGGCTGCCTTGCTGGACAACAATTCGCTATGGTGCTGCTGCCATTTG
ACACCATGGCTCTGACATGGAGCTAGCTTGAGCGCCACTTTGCCCAAAGA
GATTCTCAAGACCACGGTAGAGTATGCGATGGGCATGTGCGGAGTACTTT
CCTCAGTATGCAACTACAACGCGCCTCCCCCCTGCGTCGTTGGAAGTCTT
CTCGCCCTCTTTCCTCTGGTACATTATTCTCGCGCGTTGAGGGTATATCG
CTACAGACAGAGAGCAGTTGGACTCTCCCTTGCAGTCGTGTTTTTCAGGG
TGGGCCGGACACTCCATTTCAACGGGTTGCTGTCATTTGCTGGCAGGCAC
CTCCGTCACCGTGCGGAACGGTAGTTTATTGAACTCCTTGTCTGTAAGGT
TGATTCCTGTCGGGTCTAGCTACCCGTTCGTCCCCCTGCTTGCAGCTGAA
GCTTGCTGCCCGTTGGGGGCTGATCCATGGTTGGGAGAAGCTCTCGGCCA
TGGTCCGGTTGGTCATGGGTGTCAGATCCCTCACGAGTCTCGAGTCTAGA
CGAGAGCCGGGCAGAGCAGGAAAAACTAAGAGAGGAGCGATAAGAAACCC
AAAATTACGCTTGCAAGAAAATAAGAAAATTTAGAGCACGGCAGAAAGAG
GACAAAGAATAGAAAAAGTACCAAAGAGCCACTGTCCATGGTTATGGTGA
AGGGTTTGGGGTGAGAGGCTACAAGCATTTACTATTTGGGGAATGTTGGG
CAACAACC back to topCoding sequence (CDS) from alignment at ch2:1741691..1746448- >KJC3_002124-T2 ID=KJC3_002124-T2|Name=KJC3_002124-T2|organism=Aspergillus niger KJC3|type=CDS|length=3270bp|location=Sequence derived from alignment at ch2:1741691..1746448- (Aspergillus niger KJC3)
GTCCTGGAGAATCTGTGGTATCTCTATCCGTTCGGCTGTCACGATGGGGT
TGAACCTGCGGAGTGAGAGCAATTCCATTGTCCACGTGTCCAAGGAGACG
CGTTATCGGGTTTGGTGGTCTCTCTATATGCTGGATAACTCACTCTGTGT
CATGACGGGTCGCCCACCGAGCACCAATGACGTTTTCTGCACCACGCCGC
TGCCAGTACCTTTCAAGGAGGAAGAATTCATGGATAACAAGGTCGTTCAA
CTGATAGCTGATCATGAAGCTCGAAATATTTTCATGGAAACCTTCTGTTT
ACGGGTTCCTGGAAAAGCCCCCGACAGTGCGGGCACGCCCGATTCCTACC
GACTACAAATGTCTCCTTATGGGAAACAAAGTGACCAGGTCGCTGCTGGC
GCCATCGAAGCGCTCACCCCGAACACTTCGCTTTACTTTCTTTATCATAT
TGACCTAGCGCTGATCATGCGAGAGTCTGTTGACCTATTGTATGCTCCAG
GGGCAGCTCGAAAGTCATGGCGGGAGATCGAGGGGTCCATCTCCATGCTG
CATGGCAAGGTTGAAGCCTGGCTGTCCAGGCTCCCGCCCGCCTTCCACTT
CACGAAAGGGGCGCCGGCGTTCGAAAGGCAACGGGCAAGCCTGGCATTTC
GCTTTTGCAGCACCAAGATGCTCATTACGCAACCGTGCCTAAGCCGTCTC
GCCCAACAAAATCACGGCAATGACCCACCGGGACGGTTCTGCGAGACCAT
GGCAACCGTGTGTGTTGACCTCGCAGGTCAGATGCTCGACTTGCTGCCCG
AATCCCCGGACTTGGCCTGGGTCTATGGTGTTTCTCCCTGGTGGTGCATA
TTACATTATCTGATGCAGTCGACTACCGTCCTCATCATGGAATTGCTGCT
CATGACCAAGCCGGGGAGTGCCAAGTTTCGGCGGGTGTTGGTGCAGGTGT
CTAAGGCGACCGGCTGGCTAGCGGAAATGTCGACGAAAGATCCATCCTCC
CAAAGAGCCTGGCTGGTGTGTAAGGATCTTATCGCTGAGCATGCCCCCGA
ACTCGGTGGCATCGCCAGCCCCGCCGACCGCAGCAAATCCTGAATGGGCT
TTGTGGGCGAACATTCCGAAATCGCCTGGATGTACAGACTGAAGCGCCTC
CTAGAACGATCGAACTCCGCCTCCCCCCGAGAGACCTGGGATCGACATTC
GGTCTCTTCCGTCAATTTTTTCCTAGACGACTCGGATATCCCAGTTATTG
ATGATGTTGATCCGTCTCAACGACCCCCTGTTGCGGTTGCTGACCAACTT
GTCGACGGCTATTTTCACGCCGTCCATCCAACGTTTCCAATCGTGGGCAA
GATGATCTTTCTGGCACAGTACAAGTCTTTCTACTCGGCTCCCCATGTAC
GGCCGGGAAAACGATGGCTTGCGATACTAAATCTGATCTTCGCTGTCGCT
GCGAAACATGCGCGTCATTTGTATAATGATGCTGGCAACGGGATCGACGA
CAGTCTTGTCTACTTCTCACGAGCGTGGAAGCTTAGCATGAGTGATACAG
CTCTGCTAGAGCACCCGAATCTGCAGCAAGTACAAGTGGAGGGGCTGACT
TCCTTTTATTTAATGTCTATAGGACAAGTCAACAGGTCCTGGAGAATCTG
TGGTATCTCTATCCGTTCGGCTGTCACGATGGGGTTGAACCTGCGGAGTG
AGAGCAATTCCATTGTCCACGTGTCCAAGGAGACGCGTTATCGGGTTTGG
TGGTCTCTCTATATGCTGGATAACTCACTCTGTGTCATGACGGGTCGCCC
ACCGAGCACCAATGACGTTTTCTGCACCACGCCGCTGCCAGTACCTTTCA
AGGAGGAAGAATTCATGGATAACAAGGTCGTTCAACTGATAGCTGATCAT
GAAGCTCGAAATATTTTCATGGAAACCTTCTGTTTACGGGTTCCTGGAAA
AGCCCCCGACAGTGCGGGCACGCCCGATTCCTACCGACTACAAATGTCTC
CTTATGGGAAACAAAGTGACCAGGTCGCTGCTGGCGCCATCGAAGCGCTC
ACCCCGAACACTTCGCTTTACTTTCTTTATCATATTGACCTAGCGCTGAT
CATGCGAGAGTCTGTTGACCTATTGTATGCTCCAGGGGCAGCTCGAAAGT
CATGGCGGGAGATCGAGGGGTCCATCTCCATGCTGCATGGCAAGGTTGAA
GCCTGGCTGTCCAGGCTCCCGCCCGCCTTCCACTTCACGAAAGGGGCGCC
GGCGTTCGAAAGGCAACGGGCAAGCCTGGCATTTCGCTTTTGCAGCACCA
AGATGCTCATTACGCAACCGTGCCTAAGCCGTCTCGCCCAACAAAATCAC
GGCAATGACCCACCGGGACGGTTCTGCGAGACCATGGCAACCGTGTGTGT
TGACCTCGCAGGTCAGATGCTCGACTTGCTGCCCGAATCCCCGGACTTGG
CCTGGGTCTATGGTGTTTCTCCCTGGTGGTGCATATTACATTATCTGATG
CAGTCGACTACCGTCCTCATCATGGAATTGCTGCTCATGACCAAGCCGGG
GAGTGCCAAGTTTCGGCGGGTGTTGGTGCAGGTGTCTAAGGCGACCGGCT
GGCTAGCGGAAATGTCGACGAAAGATCCATCCTCCCAAAGAGCCTGGCTG
GTGTGTAAGGATCTTATCGCTGAGCATGCCCCCGAACTCGGTGGCATCGC
CAGCCCCGCCGACCGCAGCAAATCCTGAATGGGCTTTGTGGGCGAACATT
CCGAAATCGCCTGGATGTACAGACTGAAGCGCCTCCTAGAACGATCGAAC
TCCGCCTCCCCCCGAGAGACCTGGGATCGACATTCGGTCTCTTCCGTCAA
TTTTTTCCTAGACGACTCGGATATCCCAGTTATTGATGATGTTGATCCGT
CTCAACGACCCCCTGTTGCGGTTGCTGACCAACTTGTCGACGGCTATTTT
CACGCCGTCCATCCAACGTTTCCAATCGTGGGCAAGATGATCTTTCTGGC
ACAGTACAAGTCTTTCTACTCGGCTCCCCATGTACGGCCGGGAAAACGAT
GGCTTGCGATACTAAATCTGATCTTCGCTGTCGCTGCGAAACATGCGCGT
CATTTGTATAATGATGCTGGCAACGGGATCGACGACAGTCTTGTCTACTT
CTCACGAGCGTGGAAGCTTAGCATGAGTGATACAGCTCTGCTAGAGCACC
CGAATCTGCAGCAAGTACAAGTGGAGGGGCTGACTTCCTTTTATTTAATG
TCTATAGGACAAGTCAACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002124-T2.utr3p1 | KJC3_002124-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1741691..1746448 - |
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