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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1803088..1805099- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002145-T1 ID=KJC3_002145-T1|Name=KJC3_002145-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2012bp|location=Sequence derived from alignment at ch2:1803088..1805099- (Aspergillus niger KJC3)
CATCACCAATAGGTCCTCTGTATCGGAGACATTTCTGTACTCTAGTTACC
ATGCGGGACGTACAGACTATGACCTTGGGTATTTATTACCTTGCGATCAC
TGCCCGCCGCCATCATGTTTGGCTCAAGCAATTCAATTCCATCCTCTGCC
TCGCTGCAACCTCGCTTTCAAGCACTCGTGCAGCACTATGGCAACTTTGC
GTCAGTATTTCAGCCTCCGAGACTCCGTGAGAGCGGACGTTGCCAAAGTC
CACTCCTACTCCGGCAGCTCCTCGGGCACATCAACCCCTGAAGAAAAGGC
GTCTGCCCTTATACCCGGGATTCAAATCTCCCGTCCAGACGAGCAAGATG
GCTCTGTTACCTTTCTAGTCGGCTGGAGGGATTGCGATGCTCACAACCCT
CAAAACTGGAGCCGCCCAAAGAAATGGTTTTGCACGGTAGCAACCTGTCT
CATCGCCCTGGCCATCACCATCCCCGGTACCATAGACGCCCCAGTCTCCG
ATGCCTTTAATGAACACTATGGCGTGGGCGCGATTGCAGGGTCCATGACC
ACCGGTAAGTCGACCGTCTGGAATTTCAATGATCGTCAATTGATCTTAAT
GCCCCTGGCAGGTATGTATCTTATCGGTGTGGGCTTTGGCTCGCTGTTTG
TCGGTCCTATCTCGGAAACATTTGGCCGCAATCTTGTCTACTTCACCAAT
TTGGCCGTGTTTATGCTGTTCGTCATGGCAAAGGCATTGGCTCCTAATTA
TGGAGCTGCCATTGTTTTTCGCTTCCTAATCGGCTTCTTTGGTGCCGCAC
CCATGACCGTTGCGGGTGGCACGGTGGGTGATCTTTGGAGTCCTCTCGAG
GCCACCTTTAGCCTACCATTTGTCACTTTGGCATCGTATTCCGGTCCTAT
TCTTGGTCCCATAATTGGTGCTTATATTCCCAAGTCAGCCTTCAACTGGG
TCGACTGGATCTCCCTGATCATCGCCGGGACAGTCCTCATCTTTGTGGCT
TTGTTCCAGCCAGAAACTTACGGCCCGTTGCTGCTGCAATGGAAAGCCAA
GCACCTACGAGACCAAACCGGAGACCCTCGATATCAGGTTGATGAGTATG
CGTCTGCCAGTTCTCTGGGTCGCCGCCTTCTCGTTAATGTCTACCGTCCG
TTTCAGATGACCTACACTGAGCCGATCATCCTGGTTTTCTCCTTCTACTT
GGTCCTCTTATACATTGTATTATTCACCTTCCTGAACGGGTTCCCTTTCA
TATTCACCGATACATATGGGATCTCGACACCCCTGACTTATCTCATTTTC
GTGGCCATGCTTGCCGGAGATGCCGTTGCACTGGTGCTCATCCCGATCCT
CTATCGCTGGACGAAACAGGCAGCGGCTAAGGCAGCGGCTGAAGGAAGAG
CCCTACAGGCAGAGGTATCACTCTACTGGGCAATGGTTGGGGGTTCAATA
TTGATGCCAATCTCCTTGTTCTGGATGGGATGGACCTGCTATGTAAGTTT
TCCCTGACCCGTTCTGCGAAACCCAACATGACTGACAGTATGACACAGCC
CGGAGTCAGCATCTGGTCACCAATCCTCAGCACTTTCGTTTTCGGCTACT
CTCTCGTCACCATCTTCACGGCGACCTACCTTTACATCTGTTTCGTGTAC
ACGATCTATGCTGGCTCAGCTCTCGCATTCGTTTCGTTCAGCCGCTACGT
TATCTCGGGCGCATTACTGCCAGCTTCCGTGCCAATGTACCAACACATGA
CTCCCCACTGGGTTCTCACCCTGGTGGGTATCTTAACCACCATCATGGCC
CCGGTGCCATTTTTGCTCTATCGCTATGGCCACCGCATTCGGGCCATGAG
CAAGCACGTTCAGAACAAGGCTTGATGTACTGGCGTGCTGCCGTTATGCA
CAGGCAGCTTCCAGGATGAGGTGCTGATAGACATAAAGTATATGGTATAA
TGTATAGATCCTACCTCATGAAATAACCCTATTCTTTTTTGGATCTGGAA
CTTGACTCGAGC back to topCoding sequence (CDS) from alignment at ch2:1803088..1805099- >KJC3_002145-T1 ID=KJC3_002145-T1|Name=KJC3_002145-T1|organism=Aspergillus niger KJC3|type=CDS|length=4725bp|location=Sequence derived from alignment at ch2:1803088..1805099- (Aspergillus niger KJC3)
CCCGGAGTCAGCATCTGGTCACCAATCCTCAGCACTTTCGTTTTCGGCTA
CTCTCTCGTCACCATCTTCACGGCGACCTACCTTTACATCTGTTTCGTGT
ACACGATCTATGCTGGCTCAGCTCTCGCATTCGTTTCGTTCAGCCGCTAC
GTTATCTCGGGCGCATTACTGCCAGCTTCCGTGCCAATGTACCAACACAT
GACTCCCCACTGGGTTCTCACCCTGGTGGGTATCTTAACCACCATCATGG
CCCCGGTGCCATTTTTGCTCTATCGCTATGGCCACCGCATTCGGGCCATG
AGCAAGCACGTTCAGAACAAGGCTTGAGTATGTATCTTATCGGTGTGGGC
TTTGGCTCGCTGTTTGTCGGTCCTATCTCGGAAACATTTGGCCGCAATCT
TGTCTACTTCACCAATTTGGCCGTGTTTATGCTGTTCGTCATGGCAAAGG
CATTGGCTCCTAATTATGGAGCTGCCATTGTTTTTCGCTTCCTAATCGGC
TTCTTTGGTGCCGCACCCATGACCGTTGCGGGTGGCACGGTGGGTGATCT
TTGGAGTCCTCTCGAGGCCACCTTTAGCCTACCATTTGTCACTTTGGCAT
CGTATTCCGGTCCTATTCTTGGTCCCATAATTGGTGCTTATATTCCCAAG
TCAGCCTTCAACTGGGTCGACTGGATCTCCCTGATCATCGCCGGGACAGT
CCTCATCTTTGTGGCTTTGTTCCAGCCAGAAACTTACGGCCCGTTGCTGC
TGCAATGGAAAGCCAAGCACCTACGAGACCAAACCGGAGACCCTCGATAT
CAGGTTGATGAGTATGCGTCTGCCAGTTCTCTGGGTCGCCGCCTTCTCGT
TAATGTCTACCGTCCGTTTCAGATGACCTACACTGAGCCGATCATCCTGG
TTTTCTCCTTCTACTTGGTCCTCTTATACATTGTATTATTCACCTTCCTG
AACGGGTTCCCTTTCATATTCACCGATACATATGGGATCTCGACACCCCT
GACTTATCTCATTTTCGTGGCCATGCTTGCCGGAGATGCCGTTGCACTGG
TGCTCATCCCGATCCTCTATCGCTGGACGAAACAGGCAGCGGCTAAGGCA
GCGGCTGAAGGAAGAGCCCTACAGGCAGAGGTATCACTCTACTGGGCAAT
GGTTGGGGGTTCAATATTGATGCCAATCTCCTTGTTCTGGATGGGATGGA
CCTGCTATATGGCAACTTTGCGTCAGTATTTCAGCCTCCGAGACTCCGTG
AGAGCGGACGTTGCCAAAGTCCACTCCTACTCCGGCAGCTCCTCGGGCAC
ATCAACCCCTGAAGAAAAGGCGTCTGCCCTTATACCCGGGATTCAAATCT
CCCGTCCAGACGAGCAAGATGGCTCTGTTACCTTTCTAGTCGGCTGGAGG
GATTGCGATGCTCACAACCCTCAAAACTGGAGCCGCCCAAAGAAATGGTT
TTGCACGGTAGCAACCTGTCTCATCGCCCTGGCCATCACCATCCCCGGTA
CCATAGACGCCCCAGTCTCCGATGCCTTTAATGAACACTATGGCGTGGGC
GCGATTGCAGGGTCCATGACCACCGCCCGGAGTCAGCATCTGGTCACCAA
TCCTCAGCACTTTCGTTTTCGGCTACTCTCTCGTCACCATCTTCACGGCG
ACCTACCTTTACATCTGTTTCGTGTACACGATCTATGCTGGCTCAGCTCT
CGCATTCGTTTCGTTCAGCCGCTACGTTATCTCGGGCGCATTACTGCCAG
CTTCCGTGCCAATGTACCAACACATGACTCCCCACTGGGTTCTCACCCTG
GTGGGTATCTTAACCACCATCATGGCCCCGGTGCCATTTTTGCTCTATCG
CTATGGCCACCGCATTCGGGCCATGAGCAAGCACGTTCAGAACAAGGCTT
GAGTATGTATCTTATCGGTGTGGGCTTTGGCTCGCTGTTTGTCGGTCCTA
TCTCGGAAACATTTGGCCGCAATCTTGTCTACTTCACCAATTTGGCCGTG
TTTATGCTGTTCGTCATGGCAAAGGCATTGGCTCCTAATTATGGAGCTGC
CATTGTTTTTCGCTTCCTAATCGGCTTCTTTGGTGCCGCACCCATGACCG
TTGCGGGTGGCACGGTGGGTGATCTTTGGAGTCCTCTCGAGGCCACCTTT
AGCCTACCATTTGTCACTTTGGCATCGTATTCCGGTCCTATTCTTGGTCC
CATAATTGGTGCTTATATTCCCAAGTCAGCCTTCAACTGGGTCGACTGGA
TCTCCCTGATCATCGCCGGGACAGTCCTCATCTTTGTGGCTTTGTTCCAG
CCAGAAACTTACGGCCCGTTGCTGCTGCAATGGAAAGCCAAGCACCTACG
AGACCAAACCGGAGACCCTCGATATCAGGTTGATGAGTATGCGTCTGCCA
GTTCTCTGGGTCGCCGCCTTCTCGTTAATGTCTACCGTCCGTTTCAGATG
ACCTACACTGAGCCGATCATCCTGGTTTTCTCCTTCTACTTGGTCCTCTT
ATACATTGTATTATTCACCTTCCTGAACGGGTTCCCTTTCATATTCACCG
ATACATATGGGATCTCGACACCCCTGACTTATCTCATTTTCGTGGCCATG
CTTGCCGGAGATGCCGTTGCACTGGTGCTCATCCCGATCCTCTATCGCTG
GACGAAACAGGCAGCGGCTAAGGCAGCGGCTGAAGGAAGAGCCCTACAGG
CAGAGGTATCACTCTACTGGGCAATGGTTGGGGGTTCAATATTGATGCCA
ATCTCCTTGTTCTGGATGGGATGGACCTGCTATATGGCAACTTTGCGTCA
GTATTTCAGCCTCCGAGACTCCGTGAGAGCGGACGTTGCCAAAGTCCACT
CCTACTCCGGCAGCTCCTCGGGCACATCAACCCCTGAAGAAAAGGCGTCT
GCCCTTATACCCGGGATTCAAATCTCCCGTCCAGACGAGCAAGATGGCTC
TGTTACCTTTCTAGTCGGCTGGAGGGATTGCGATGCTCACAACCCTCAAA
ACTGGAGCCGCCCAAAGAAATGGTTTTGCACGGTAGCAACCTGTCTCATC
GCCCTGGCCATCACCATCCCCGGTACCATAGACGCCCCAGTCTCCGATGC
CTTTAATGAACACTATGGCGTGGGCGCGATTGCAGGGTCCATGACCACCG
CCCGGAGTCAGCATCTGGTCACCAATCCTCAGCACTTTCGTTTTCGGCTA
CTCTCTCGTCACCATCTTCACGGCGACCTACCTTTACATCTGTTTCGTGT
ACACGATCTATGCTGGCTCAGCTCTCGCATTCGTTTCGTTCAGCCGCTAC
GTTATCTCGGGCGCATTACTGCCAGCTTCCGTGCCAATGTACCAACACAT
GACTCCCCACTGGGTTCTCACCCTGGTGGGTATCTTAACCACCATCATGG
CCCCGGTGCCATTTTTGCTCTATCGCTATGGCCACCGCATTCGGGCCATG
AGCAAGCACGTTCAGAACAAGGCTTGAGTATGTATCTTATCGGTGTGGGC
TTTGGCTCGCTGTTTGTCGGTCCTATCTCGGAAACATTTGGCCGCAATCT
TGTCTACTTCACCAATTTGGCCGTGTTTATGCTGTTCGTCATGGCAAAGG
CATTGGCTCCTAATTATGGAGCTGCCATTGTTTTTCGCTTCCTAATCGGC
TTCTTTGGTGCCGCACCCATGACCGTTGCGGGTGGCACGGTGGGTGATCT
TTGGAGTCCTCTCGAGGCCACCTTTAGCCTACCATTTGTCACTTTGGCAT
CGTATTCCGGTCCTATTCTTGGTCCCATAATTGGTGCTTATATTCCCAAG
TCAGCCTTCAACTGGGTCGACTGGATCTCCCTGATCATCGCCGGGACAGT
CCTCATCTTTGTGGCTTTGTTCCAGCCAGAAACTTACGGCCCGTTGCTGC
TGCAATGGAAAGCCAAGCACCTACGAGACCAAACCGGAGACCCTCGATAT
CAGGTTGATGAGTATGCGTCTGCCAGTTCTCTGGGTCGCCGCCTTCTCGT
TAATGTCTACCGTCCGTTTCAGATGACCTACACTGAGCCGATCATCCTGG
TTTTCTCCTTCTACTTGGTCCTCTTATACATTGTATTATTCACCTTCCTG
AACGGGTTCCCTTTCATATTCACCGATACATATGGGATCTCGACACCCCT
GACTTATCTCATTTTCGTGGCCATGCTTGCCGGAGATGCCGTTGCACTGG
TGCTCATCCCGATCCTCTATCGCTGGACGAAACAGGCAGCGGCTAAGGCA
GCGGCTGAAGGAAGAGCCCTACAGGCAGAGGTATCACTCTACTGGGCAAT
GGTTGGGGGTTCAATATTGATGCCAATCTCCTTGTTCTGGATGGGATGGA
CCTGCTATATGGCAACTTTGCGTCAGTATTTCAGCCTCCGAGACTCCGTG
AGAGCGGACGTTGCCAAAGTCCACTCCTACTCCGGCAGCTCCTCGGGCAC
ATCAACCCCTGAAGAAAAGGCGTCTGCCCTTATACCCGGGATTCAAATCT
CCCGTCCAGACGAGCAAGATGGCTCTGTTACCTTTCTAGTCGGCTGGAGG
GATTGCGATGCTCACAACCCTCAAAACTGGAGCCGCCCAAAGAAATGGTT
TTGCACGGTAGCAACCTGTCTCATCGCCCTGGCCATCACCATCCCCGGTA
CCATAGACGCCCCAGTCTCCGATGCCTTTAATGAACACTATGGCGTGGGC
GCGATTGCAGGGTCCATGACCACCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002145-T1.utr3p1 | KJC3_002145-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002145-T1.utr5p1 | KJC3_002145-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1803088..1805099 - |
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