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KJC3_002226-T1, KJC3_002226-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002226-T1
Unique NameKJC3_002226-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2016731..2018501-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002226-T1 ID=KJC3_002226-T1|Name=KJC3_002226-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1771bp|location=Sequence derived from alignment at ch2:2016731..2018501- (Aspergillus niger KJC3)
CACTTATAATCCTCATGGCCCCAATAAATTGTTCTTCATCTGACTTTCCT
TGTGATGAGGGAGGATGTTTGCGTTGTAGGATTCACTCCCTACCAGCTGT
AGCCAAGGAACGCCGCGTCGGATCACCAATATCTGCTGGATACGAACAAA
TCTTGGCTTCGTCCAAACTTGCCCAGTCTGCGGGAGATCTCGTGTTCGTG
GGCAGATGATTTGAGGCTGACTGCCTTAACAGTGGCTGGGGCTTAGCTGA
GTTCTCGTCAAGTCTAAATAAATGGAATAGGGGTTCTACGACGATGTTCA
TGATGGGTGTGGAAAATAGCATGCGAAAAGCGGGCTCAGATCACAGGATA
GCGGATCATCTATCGGATTAAACAATGTCACCCAAACGTCTTATCGTCTG
CTGCGATGGTAAGTCTGCTCAGTAGCACTGCTGAACATGTCTATATCGGT
GCTAAAAGTCGGTCGGTTGTTTCAGGTACCTGGAAAGACTCCACCGCAGA
TACTCGTCAACCTCCGTCCAATGTTACGCGGTTGACGCGCACTTTGAGTC
GCGTGGCAGTTGTGAAGGAGAATGGACAAGACAAAGAAATTCCTCAGATA
ATCTATTACCAAAAGGGCGTCGGGACCGGCCTAGCGGACAAGTATTTCGG
AGGTACGGTGTCTTAGACGTGAACCCGACCGTGTCCCATGGACATTTCTG
ACACATGCAGTAGGAGTCGCTGGGATTGGAATCAGTGCGAACGTCCGTGC
CGCCTATGGCTTTCTCGTGGATAACTACGATGAGGGCGATAAGATCTACT
TCTTTGGATTCTCTAGGGGTGCTTATACCGCCAGAGCGATCGCGGGTATA
GTCTGTGAACTAGGGCTGTTGACACCCCGAGGCATGGACAATTTCGCCAC
GGTATATGATGATTTCTACAACCGAAAATTGCCAGTGTACAATGAGGATG
ATCGCCGACAGCTAGGCTTCCGTGATCCTCTCCCGCGGTTTACGGTGGAG
ATTGTTGGGGTCTGGGATACGGTCGGTTTCTATAAGCCCTGGTTGTTCGG
ACACTGGTCCGGGGAGAAACTTGAGTTTCGAAATACTCTGCTTTCCAGGA
AGGTCAAGTATGCGTTCCATGCCTTAGCACTGGACGAAGAGAGAACCGCA
TATCAGCCCACGCTCTGGCATCTGCCAGAGAATGCTAAAGGTCAGGAGCT
GCTCCAAGTGTGGTTCTCTGGGGTGCATACAGATGTGGGTGGGGGAGGAC
ATGACCCTCGACTGGCCAATATTACCTTAGCCTGGATGATCGCGCAATGC
ACAAAGCATAACCAGTTGAGTTCCGATATAGAGGACTACCTCTTCGACCG
TCCTCCGCGACCGTTAGAGACAGACACAGCGCCATGGGCGACGGCATTGG
GAAAAACCAGTACGGGAAGTTTCGCTCGGACAGTGGAGACCATCTTGGGC
GGGAAGTCGAAAAGAACCCCCCTCCAGTATAGGCAGGTTGGCGATGGAGA
TCCGCAGCCTACCAATGAGATGATCCATGTTTCCATTGTTGACCGTGTTT
TAAGTGGGAATGGAAACATGGCTGAAGCCGTACCCTGGCCCTCACTAGTG
ATCAGAAACCCAACTCCTGATCAAGAATGGGTACTTGACGGTGGAGGGAG
ACTTATGCAGATGCCAGCGCTGAGACAGGAGCTGTTTATGAAGGGAAGAA
TTCGCACGGTTCATGTGGATGAGATAGACTAATGTAACTAAATTTTAGCT
ATGTCATGTAGCAACAGGATG
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Coding sequence (CDS) from alignment at ch2:2016731..2018501-

>KJC3_002226-T1 ID=KJC3_002226-T1|Name=KJC3_002226-T1|organism=Aspergillus niger KJC3|type=CDS|length=3690bp|location=Sequence derived from alignment at ch2:2016731..2018501- (Aspergillus niger KJC3)
GAGTCGCTGGGATTGGAATCAGTGCGAACGTCCGTGCCGCCTATGGCTTT
CTCGTGGATAACTACGATGAGGGCGATAAGATCTACTTCTTTGGATTCTC
TAGGGGTGCTTATACCGCCAGAGCGATCGCGGGTATAGTCTGTGAACTAG
GGCTGTTGACACCCCGAGGCATGGACAATTTCGCCACGGTATATGATGAT
TTCTACAACCGAAAATTGCCAGTGTACAATGAGGATGATCGCCGACAGCT
AGGCTTCCGTGATCCTCTCCCGCGGTTTACGGTGGAGATTGTTGGGGTCT
GGGATACGGTCGGTTTCTATAAGCCCTGGTTGTTCGGACACTGGTCCGGG
GAGAAACTTGAGTTTCGAAATACTCTGCTTTCCAGGAAGGTCAAGTATGC
GTTCCATGCCTTAGCACTGGACGAAGAGAGAACCGCATATCAGCCCACGC
TCTGGCATCTGCCAGAGAATGCTAAAGGTCAGGAGCTGCTCCAAGTGTGG
TTCTCTGGGGTGCATACAGATGTGGGTGGGGGAGGACATGACCCTCGACT
GGCCAATATTACCTTAGCCTGGATGATCGCGCAATGCACAAAGCATAACC
AGTTGAGTTCCGATATAGAGGACTACCTCTTCGACCGTCCTCCGCGACCG
TTAGAGACAGACACAGCGCCATGGGCGACGGCATTGGGAAAAACCAGTAC
GGGAAGTTTCGCTCGGACAGTGGAGACCATCTTGGGCGGGAAGTCGAAAA
GAACCCCCCTCCAGTATAGGCAGGTTGGCGATGGAGATCCGCAGCCTACC
AATGAGATGATCCATGTTTCCATTGTTGACCGTGTTTTAAGTGGGAATGG
AAACATGGCTGAAGCCGTACCCTGGCCCTCACTAGTGATCAGAAACCCAA
CTCCTGATCAAGAATGGGTACTTGACGGTGGAGGGAGACTTATGCAGATG
CCAGCGCTGAGACAGGAGCTGTTTATGAAGGGAAGAATTCGCACGGTTCA
TGTGGATGAGATAGACTAAGTACCTGGAAAGACTCCACCGCAGATACTCG
TCAACCTCCGTCCAATGTTACGCGGTTGACGCGCACTTTGAGTCGCGTGG
CAGTTGTGAAGGAGAATGGACAAGACAAAGAAATTCCTCAGATAATCTAT
TACCAAAAGGGCGTCGGGACCGGCCTAGCGGACAAGTATTTCGGAGATGT
CACCCAAACGTCTTATCGTCTGCTGCGATGGAGTCGCTGGGATTGGAATC
AGTGCGAACGTCCGTGCCGCCTATGGCTTTCTCGTGGATAACTACGATGA
GGGCGATAAGATCTACTTCTTTGGATTCTCTAGGGGTGCTTATACCGCCA
GAGCGATCGCGGGTATAGTCTGTGAACTAGGGCTGTTGACACCCCGAGGC
ATGGACAATTTCGCCACGGTATATGATGATTTCTACAACCGAAAATTGCC
AGTGTACAATGAGGATGATCGCCGACAGCTAGGCTTCCGTGATCCTCTCC
CGCGGTTTACGGTGGAGATTGTTGGGGTCTGGGATACGGTCGGTTTCTAT
AAGCCCTGGTTGTTCGGACACTGGTCCGGGGAGAAACTTGAGTTTCGAAA
TACTCTGCTTTCCAGGAAGGTCAAGTATGCGTTCCATGCCTTAGCACTGG
ACGAAGAGAGAACCGCATATCAGCCCACGCTCTGGCATCTGCCAGAGAAT
GCTAAAGGTCAGGAGCTGCTCCAAGTGTGGTTCTCTGGGGTGCATACAGA
TGTGGGTGGGGGAGGACATGACCCTCGACTGGCCAATATTACCTTAGCCT
GGATGATCGCGCAATGCACAAAGCATAACCAGTTGAGTTCCGATATAGAG
GACTACCTCTTCGACCGTCCTCCGCGACCGTTAGAGACAGACACAGCGCC
ATGGGCGACGGCATTGGGAAAAACCAGTACGGGAAGTTTCGCTCGGACAG
TGGAGACCATCTTGGGCGGGAAGTCGAAAAGAACCCCCCTCCAGTATAGG
CAGGTTGGCGATGGAGATCCGCAGCCTACCAATGAGATGATCCATGTTTC
CATTGTTGACCGTGTTTTAAGTGGGAATGGAAACATGGCTGAAGCCGTAC
CCTGGCCCTCACTAGTGATCAGAAACCCAACTCCTGATCAAGAATGGGTA
CTTGACGGTGGAGGGAGACTTATGCAGATGCCAGCGCTGAGACAGGAGCT
GTTTATGAAGGGAAGAATTCGCACGGTTCATGTGGATGAGATAGACTAAG
TACCTGGAAAGACTCCACCGCAGATACTCGTCAACCTCCGTCCAATGTTA
CGCGGTTGACGCGCACTTTGAGTCGCGTGGCAGTTGTGAAGGAGAATGGA
CAAGACAAAGAAATTCCTCAGATAATCTATTACCAAAAGGGCGTCGGGAC
CGGCCTAGCGGACAAGTATTTCGGAGATGTCACCCAAACGTCTTATCGTC
TGCTGCGATGGAGTCGCTGGGATTGGAATCAGTGCGAACGTCCGTGCCGC
CTATGGCTTTCTCGTGGATAACTACGATGAGGGCGATAAGATCTACTTCT
TTGGATTCTCTAGGGGTGCTTATACCGCCAGAGCGATCGCGGGTATAGTC
TGTGAACTAGGGCTGTTGACACCCCGAGGCATGGACAATTTCGCCACGGT
ATATGATGATTTCTACAACCGAAAATTGCCAGTGTACAATGAGGATGATC
GCCGACAGCTAGGCTTCCGTGATCCTCTCCCGCGGTTTACGGTGGAGATT
GTTGGGGTCTGGGATACGGTCGGTTTCTATAAGCCCTGGTTGTTCGGACA
CTGGTCCGGGGAGAAACTTGAGTTTCGAAATACTCTGCTTTCCAGGAAGG
TCAAGTATGCGTTCCATGCCTTAGCACTGGACGAAGAGAGAACCGCATAT
CAGCCCACGCTCTGGCATCTGCCAGAGAATGCTAAAGGTCAGGAGCTGCT
CCAAGTGTGGTTCTCTGGGGTGCATACAGATGTGGGTGGGGGAGGACATG
ACCCTCGACTGGCCAATATTACCTTAGCCTGGATGATCGCGCAATGCACA
AAGCATAACCAGTTGAGTTCCGATATAGAGGACTACCTCTTCGACCGTCC
TCCGCGACCGTTAGAGACAGACACAGCGCCATGGGCGACGGCATTGGGAA
AAACCAGTACGGGAAGTTTCGCTCGGACAGTGGAGACCATCTTGGGCGGG
AAGTCGAAAAGAACCCCCCTCCAGTATAGGCAGGTTGGCGATGGAGATCC
GCAGCCTACCAATGAGATGATCCATGTTTCCATTGTTGACCGTGTTTTAA
GTGGGAATGGAAACATGGCTGAAGCCGTACCCTGGCCCTCACTAGTGATC
AGAAACCCAACTCCTGATCAAGAATGGGTACTTGACGGTGGAGGGAGACT
TATGCAGATGCCAGCGCTGAGACAGGAGCTGTTTATGAAGGGAAGAATTC
GCACGGTTCATGTGGATGAGATAGACTAAGTACCTGGAAAGACTCCACCG
CAGATACTCGTCAACCTCCGTCCAATGTTACGCGGTTGACGCGCACTTTG
AGTCGCGTGGCAGTTGTGAAGGAGAATGGACAAGACAAAGAAATTCCTCA
GATAATCTATTACCAAAAGGGCGTCGGGACCGGCCTAGCGGACAAGTATT
TCGGAGATGTCACCCAAACGTCTTATCGTCTGCTGCGATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002226KJC3_002226Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002226-T1KJC3_002226-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002226-T1.cdsKJC3_002226-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002226-T1.utr3p1KJC3_002226-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002226-T1.exon3KJC3_002226-T1.exon3Aspergillus niger KJC3exon
KJC3_002226-T1.exon2KJC3_002226-T1.exon2Aspergillus niger KJC3exon
KJC3_002226-T1.exon1KJC3_002226-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002226-T1.utr5p1KJC3_002226-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR018712
DBxrefPFAM:PF09994
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2016731..2018501 -
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