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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2188473..2189871+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002291-T1 ID=KJC3_002291-T1|Name=KJC3_002291-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1399bp|location=Sequence derived from alignment at ch2:2188473..2189871+ (Aspergillus niger KJC3)
AAGAATAGAACCGTCATAGAACAATACACTACTCATCTACTCTAAACTCT
AAACATTGAGCCCATAATGACCCCTCGCATCCTCATCATCGGCGCCGGCC
TCTCCGGCCTCACCATCTCCCGCATCCTCACCAACGCCTCCATCCCCAAC
ATCGTCTTTGAAGCCTCCACCCCCGACCGCAGCCAAGGCTACGCCATCAG
CCTCCGCGAATGGGGCTACACCTCCCTCCTCACAGCCCTAGGTGACCTGC
CCCTCCGCAGTCTCACCCGGGGCGTGGCTCCAGACCGCATCCTCGGCGGA
ACCGGCTGGATCGACCAAGCCCTCCGGGACAACCACACCGGAAACCTCCT
AGTGGCTCCCGACCCAGAAGCCAAGCAATGCATCGTGCGGGCAAATCGCA
ACGCCCTCCGCACCTGGATCGCCGATAGCGGTGACGAGGAAGTGGACATC
CGCTACGGCCACCGTCTGCGCAGTGTGCAGGGCTCAATGGGAAACGTGAC
GGCCACGTTCGACAACGGCGCCAAGTACCAGGGCTCATTGGTCATCGCAG
CAGATGGCGTGCATTCTAGCGTGCGGTCTCAGATCCTGCCCCACGTGAGC
CCGGATATTGTGCCCGTGGTGGTGTATCATGGGGAATTGGAACTCCCTCG
CAAGGAATTCGATAATCTTATCCGTCCGCACTCCGGACCGTCGAATATCC
TAGCTGGTGTGGGTGATGGGTTCAATACCCCTATTACTGTTTGTAATATC
ACTCCTACACATGTGCATCTCGATTGGTCGTATTCGAGACCGAGTACGGA
AAACAAGGAGAATAAGGATCCTCTCTATCGGCCGCATGTCTCTGCTGCTG
AGGCTAAGCAGATTCCCCCGGCCTTGTTGGAGGAAATTGCCTCCCGGGAT
CTGGCGAGGCCGTGGTCCCAGCTGCTTAATGCCGAGGCGTTGCCGACTCA
TCGTGTCTTTAACTGGGTGAGTCGCTGTGTGTCGGTAACGAGGGAGGATG
TGAATGCTGCGCAGAAGCAGGGCGTGGTGTTTATTGGGGACTCGTGGCAT
GCGATGCCAATTTTTGGGGGCGAAGGGGGTAATCATGCCCTGGTTGATGC
GGTGGAGTTGGCGGAGGCATTGACGGGTAAGGAAGGGAATTTGGATGCTG
CTGTAACGGGGTATTATGATCGCGCGTGGAGACGCTGTCAGGAGGCCGTG
AGACGGTCTAGGCAGAGGTTCTTCCAGTTGCATCGGCCTATGAGGGAGTG
GATGGAGATTGCGGAGAAGAAAAAGATGATGGCTGCTATGAAGGGGGTGT
AGGCTCATTGATTGTGTAGCTGTACTGGGGTAGGAGTTATGTGATTACTT
CGATTGATTTTATTTGGTTAGTGATTCGATATGGAGAACCTTTTCTGCA back to topCoding sequence (CDS) from alignment at ch2:2188473..2189871+ >KJC3_002291-T1 ID=KJC3_002291-T1|Name=KJC3_002291-T1|organism=Aspergillus niger KJC3|type=CDS|length=1236bp|location=Sequence derived from alignment at ch2:2188473..2189871+ (Aspergillus niger KJC3)
ATGACCCCTCGCATCCTCATCATCGGCGCCGGCCTCTCCGGCCTCACCAT
CTCCCGCATCCTCACCAACGCCTCCATCCCCAACATCGTCTTTGAAGCCT
CCACCCCCGACCGCAGCCAAGGCTACGCCATCAGCCTCCGCGAATGGGGC
TACACCTCCCTCCTCACAGCCCTAGGTGACCTGCCCCTCCGCAGTCTCAC
CCGGGGCGTGGCTCCAGACCGCATCCTCGGCGGAACCGGCTGGATCGACC
AAGCCCTCCGGGACAACCACACCGGAAACCTCCTAGTGGCTCCCGACCCA
GAAGCCAAGCAATGCATCGTGCGGGCAAATCGCAACGCCCTCCGCACCTG
GATCGCCGATAGCGGTGACGAGGAAGTGGACATCCGCTACGGCCACCGTC
TGCGCAGTGTGCAGGGCTCAATGGGAAACGTGACGGCCACGTTCGACAAC
GGCGCCAAGTACCAGGGCTCATTGGTCATCGCAGCAGATGGCGTGCATTC
TAGCGTGCGGTCTCAGATCCTGCCCCACGTGAGCCCGGATATTGTGCCCG
TGGTGGTGTATCATGGGGAATTGGAACTCCCTCGCAAGGAATTCGATAAT
CTTATCCGTCCGCACTCCGGACCGTCGAATATCCTAGCTGGTGTGGGTGA
TGGGTTCAATACCCCTATTACTGTTTGTAATATCACTCCTACACATGTGC
ATCTCGATTGGTCGTATTCGAGACCGAGTACGGAAAACAAGGAGAATAAG
GATCCTCTCTATCGGCCGCATGTCTCTGCTGCTGAGGCTAAGCAGATTCC
CCCGGCCTTGTTGGAGGAAATTGCCTCCCGGGATCTGGCGAGGCCGTGGT
CCCAGCTGCTTAATGCCGAGGCGTTGCCGACTCATCGTGTCTTTAACTGG
GTGAGTCGCTGTGTGTCGGTAACGAGGGAGGATGTGAATGCTGCGCAGAA
GCAGGGCGTGGTGTTTATTGGGGACTCGTGGCATGCGATGCCAATTTTTG
GGGGCGAAGGGGGTAATCATGCCCTGGTTGATGCGGTGGAGTTGGCGGAG
GCATTGACGGGTAAGGAAGGGAATTTGGATGCTGCTGTAACGGGGTATTA
TGATCGCGCGTGGAGACGCTGTCAGGAGGCCGTGAGACGGTCTAGGCAGA
GGTTCTTCCAGTTGCATCGGCCTATGAGGGAGTGGATGGAGATTGCGGAG
AAGAAAAAGATGATGGCTGCTATGAAGGGGGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002291-T1.utr5p1 | KJC3_002291-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002291-T1.utr3p1 | KJC3_002291-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.6 |
| Note | SMCOG1087:hypothetical protein |
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2188473..2189871 + |
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