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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2269604..2273185+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002325-T1 ID=KJC3_002325-T1|Name=KJC3_002325-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3582bp|location=Sequence derived from alignment at ch2:2269604..2273185+ (Aspergillus niger KJC3)
CCCATTCAGTCTGTGTCTCCCCTTGGACCCTTCTCTGTTGTCTTCCTCCC
CCACAGACTCTCGCGAGTTTTGCTGCATTGCTTCCCCTTCTTCCAGGGCA
TGGCTTTCTGCTTCTCTCGCTAACTCTCACTGCCGCTCCTTATTTGCTCA
TCTATCGCGTCGACAATGGCCTTTTTCTAACCGAGTAATCCACCCCCCCG
TCGAGACGTGTAACGCATCGCGTGCTCGCCTCCAGTGCCCCTCTTTTGCT
TTGCTGGTGTCCAACTCACAGCAACTCACGCTCATATAGTGCCTTGTATT
CTGTTACCACATGGCAGCTGTATTCGTACCACCTTCGCCTCGGTCTTCGC
TTAATATGTCGACTCGCCGACCACTTGCCAACGTGCCGAATGCTACCAAT
TCCCCTCACAGGTCAGGCCTCGTGCCTGCCAAACGTCTACGTCCAACGAG
TAACCAGATTGACATCCCTTACGGCCAGCCTCCTCCGAAGAAGCAGGTAG
TGGACGGTCAGGAGGCGGACGCTCGATCCCCAACCCGGACCAGGGCGTCC
GCATACCAAAACACGGACTCCAAACTGTTCTTGCGGCGCACGAATAATGC
TCAGCCGAGTGCATTCGAAAGGAAACTGGTCGCTGTGAGAGATAAAGAAC
GACAGGCACAAATGAAAGGCACGAGGCACGAGAGGCCTTCTGCGGAGACC
CTCGATTCCATCCGGCAGTGGCAGAGGCATTACCGCAAGGCGTTTCCTCA
GTTTGTTTTCTACTTTGATAGCATCCCGGAAGATGTTCGCAGCAAGAGCT
CTAGGCAGGTACTTGCATTGGGAGCGGTAAGTTTCCGTCTGGCTCGACAT
CTCCTACACTTGATCCTTTAAAGGAGCTGCGTGCTGAGGGTCAATGATGC
CCCACCGTTCCATTGCGGAGGTTATATCTACGTGACTGCGTAACTTTACT
GACTTCATTCGTCACAGCGTGAAGAAAAATTCTTCTCGCGTCTAGTGACC
CACGTCGTCACGTCTCGTCCTATTCCTCCAGAAAACGGTCCCACGAATGC
ACCTGAATACAATGCGGAGTCGGCGGAGCAAGCGGCGGCGGATGGTTCGC
TGCAGACAGTAAACCCGTCCCTGCTCGAGAAGTGCGCCGATACACACCTT
CATATGACCTTGAAAAACGATGCACGGCGGGAGCAGAAGGGCATGGATGT
TTTACACAGAGCCCGCCAGATGGGAATGAAGATCTGGGCGATCGAAAAAC
TGCAGCGCATGATCACGGCGATCAATGATGGCGATGTCGGAGGGCATGAT
GGCCATGCGACGCGAAACAGCAATGCTGCTGGCGGCCATGCCAGGGCTCG
GGGTGAAAATGATCTTTCGCAAGTGCTTCAGAATGAGCTGAATGGCCCGT
CAGATCGCAATCCTCTCTCGGTGTTGAAGGAGCTGGTTATGTTCAAGGGT
CCTTTCATATATGTCCATGACATGGACGAGAAGACGCGCCCTGTGATGGT
GCGAGAATACCCAAAGGTTGCAAGGCGGCAGGATGGTATATGGCCGCAAT
TCCGAAGTGCACGGCTGGGAAAGTGTCCGTTCATTGAGGACCCGCCTACA
CAGAAGGACATTGACCGTCAACGTGCCCGTATAAAAGAGAGGACGGAGAG
ACAGGAAAGGGACGAAAGAGCTGTTGCTAATGCTGCTCCTGTACAAGACG
TTCCGGACGCGAAACTAAATGCACCAGAAACTCATAGGAAGGTTACAAAG
CACGAGGATAAGACTCCCGAATTGGGCCAAACAGAAGAGGCACCCCTTGA
GCCCCAGCCTGAACTCCAGGACATTCAGTCGACGAAACAATTATCGCCCA
GGAAAAGCTCCGAGAGCTTTGTGCCCCCGCCTCCTCAACGGAAAGGGCCA
TTCTTCCATGGCCGTGAACCTGCCGCATCAGGCGTACAACCCTCGAATAT
TACGTCCGCCATTCGTTCGCAGATGGTTTCATCGACGGCTGCTGCACCTG
GTGCCAAGGCTGGCCTGAGCAAGGAAGTTCATGAACTCAAGAGAAAGGTG
CTCGAAAAAGGAAATGGAGGGCTTACAGCGGGGACTATGCCTCCATCACA
CCACGCCGTAGATGGAGCCGCACCGTTGAAGGCGAAACCATTGGAAAACA
GCCTCGGAAATATGCAACCGCCTAAAAAGCTCGTAAATGTCCCTGAGGAG
GAATCAACGCAGTTGGAAAACAACGGCGCTCCCAAGCGGCGGGCCGGTGA
TCGGAAAACCGTAATAATACCGAAAAGGAAGGAGAGACGGAGAGACCCTA
AGCCAGGTTACTGTGAGAACTGCAGGGACAAATTCGATGACTTCGAAGAG
GTTAGTCCGGAGGCTCAAGATTCAGAAAAGAAGAATGCTAACCTTTGGCA
GCACATTGTAACTCGGAAGCACCGCCGCTTTGCGACAAACCGAGCGAACT
GGGCCGAGCTCGACGCCTTACTTTATCAGCTGGAGAGGCCTGTGAAATCT
GGTGCGGAAGGTGTCCCAGGTTTATAATCAGGCCGTGCGTTCGTGAATGA
AAGGAAAGGATGTGAAGTCTGTGACGGCTTGTCTATTTCCCGGACTGAAC
TGGCTGTAGCGTTGCCTGCGGAGATGATTTGCTGGCCGCTCAGCAGTGTT
AATATGTGAAGATATTCAGCTCGCCTTCCATAACACTGGCATATACACCC
GTCTTTCAATTACTCCTCACGTACAACTATCGACAGACGATGCGATTAAT
ACTGCATTTCTATTCCTTCATCCTTCCCCTTCTTATTTCCTACAACCATT
TCCTATCACAATTCGTTCTCCTCTTCTGTAATTGGTGCACAGCCGGCGTC
CCTGGATTCTGCATGCCATATCCCTACATACTCTTGACCTGATGAATGAA
AAGCATCTAACGGCCTCGCCAACGACGAAATTTTGAAGAGATCTTGGAAA
CCCCACATCGATAAAACCGAAAATGGAAAAAATCAGCATGAGAATGAGAA
ACAGGAAGGGAAATACGCAAAGAAGGGTGATCAACGCGCAATGAATAAAG
GCAGGTGACACATGGGACTCATCAAAATCCAGGACATACATACATTCATG
CATGCATCCATGCACACACCGCGCGCATTGGGAAGACAAGCTTATACTTC
AATGGTGTCCATGATTGCATACATTTTTGATTTTTCTTTCTTTCTTTTTT
CTTTCCTTACTTTCTTTTCTCTTTTTTCCTATATAGTATCCTTTGCATAT
TGCTTTTCTTGATCTTACCATACCTTCATAGGCGGATGGATGGATGGGTG
GATGGATGTATTCAAACAAACCGAGGGGTGGTTGCATACAAAAGACATGG
CGGTACATGTCTGGACTGGTGTTGAGTTTAGTTTTGCTGCTTACGAGCTT
GGTGGTTATCTTCTTCTTTTTCTTTACCTTTTTTTGTTTCCTTTTGTGTC
TCACTAGTTGAGTGATATGGGTTCAGTTTTTGTCGGCTGAACATAAGTGT
GTCACTATACTACTACTAGTTACTACTAGCCTTATAGCTATAATTGTAGC
TATAGCATAGGCTGTAGCCATAGAAATGGAAC back to topCoding sequence (CDS) from alignment at ch2:2269604..2273185+ >KJC3_002325-T1 ID=KJC3_002325-T1|Name=KJC3_002325-T1|organism=Aspergillus niger KJC3|type=CDS|length=6075bp|location=Sequence derived from alignment at ch2:2269604..2273185+ (Aspergillus niger KJC3)
ATGGCAGCTGTATTCGTACCACCTTCGCCTCGGTCTTCGCTTAATATGTC
GACTCGCCGACCACTTGCCAACGTGCCGAATGCTACCAATTCCCCTCACA
GGTCAGGCCTCGTGCCTGCCAAACGTCTACGTCCAACGAGTAACCAGATT
GACATCCCTTACGGCCAGCCTCCTCCGAAGAAGCAGGTAGTGGACGGTCA
GGAGGCGGACGCTCGATCCCCAACCCGGACCAGGGCGTCCGCATACCAAA
ACACGGACTCCAAACTGTTCTTGCGGCGCACGAATAATGCTCAGCCGAGT
GCATTCGAAAGGAAACTGGTCGCTGTGAGAGATAAAGAACGACAGGCACA
AATGAAAGGCACGAGGCACGAGAGGCCTTCTGCGGAGACCCTCGATTCCA
TCCGGCAGTGGCAGAGGCATTACCGCAAGGCGTTTCCTCAGTTTGTTTTC
TACTTTGATAGCATCCCGGAAGATGTTCGCAGCAAGAGCTCTAGGCAGGT
ACTTGCATTGGGAGCGCGTGAAGAAAAATTCTTCTCGCGTCTAGTGACCC
ACGTCGTCACGTCTCGTCCTATTCCTCCAGAAAACGGTCCCACGAATGCA
CCTGAATACAATGCGGAGTCGGCGGAGCAAGCGGCGGCGGATGGTTCGCT
GCAGACAGTAAACCCGTCCCTGCTCGAGAAGTGCGCCGATACACACCTTC
ATATGACCTTGAAAAACGATGCACGGCGGGAGCAGAAGGGCATGGATGTT
TTACACAGAGCCCGCCAGATGGGAATGAAGATCTGGGCGATCGAAAAACT
GCAGCGCATGATCACGGCGATCAATGATGGCGATGTCGGAGGGCATGATG
GCCATGCGACGCGAAACAGCAATGCTGCTGGCGGCCATGCCAGGGCTCGG
GGTGAAAATGATCTTTCGCAAGTGCTTCAGAATGAGCTGAATGGCCCGTC
AGATCGCAATCCTCTCTCGGTGTTGAAGGAGCTGGTTATGTTCAAGGGTC
CTTTCATATATGTCCATGACATGGACGAGAAGACGCGCCCTGTGATGGTG
CGAGAATACCCAAAGGTTGCAAGGCGGCAGGATGGTATATGGCCGCAATT
CCGAAGTGCACGGCTGGGAAAGTGTCCGTTCATTGAGGACCCGCCTACAC
AGAAGGACATTGACCGTCAACGTGCCCGTATAAAAGAGAGGACGGAGAGA
CAGGAAAGGGACGAAAGAGCTGTTGCTAATGCTGCTCCTGTACAAGACGT
TCCGGACGCGAAACTAAATGCACCAGAAACTCATAGGAAGGTTACAAAGC
ACGAGGATAAGACTCCCGAATTGGGCCAAACAGAAGAGGCACCCCTTGAG
CCCCAGCCTGAACTCCAGGACATTCAGTCGACGAAACAATTATCGCCCAG
GAAAAGCTCCGAGAGCTTTGTGCCCCCGCCTCCTCAACGGAAAGGGCCAT
TCTTCCATGGCCGTGAACCTGCCGCATCAGGCGTACAACCCTCGAATATT
ACGTCCGCCATTCGTTCGCAGATGGTTTCATCGACGGCTGCTGCACCTGG
TGCCAAGGCTGGCCTGAGCAAGGAAGTTCATGAACTCAAGAGAAAGGTGC
TCGAAAAAGGAAATGGAGGGCTTACAGCGGGGACTATGCCTCCATCACAC
CACGCCGTAGATGGAGCCGCACCGTTGAAGGCGAAACCATTGGAAAACAG
CCTCGGAAATATGCAACCGCCTAAAAAGCTCGTAAATGTCCCTGAGGAGG
AATCAACGCAGTTGGAAAACAACGGCGCTCCCAAGCGGCGGGCCGGTGAT
CGGAAAACCGTAATAATACCGAAAAGGAAGGAGAGACGGAGAGACCCTAA
GCCAGGTTACTGTGAGAACTGCAGGGACAAATTCGATGACTTCGAAGAGC
ACATTGTAACTCGGAAGCACCGCCGCTTTGCGACAAACCGAGCGAACTGG
GCCGAGCTCGACGCCTTACTTTATCAGCTGGAGAGGCCTGTGAAATCTGG
TGCGGAAGGTGTCCCAGGTTTATAAATGGCAGCTGTATTCGTACCACCTT
CGCCTCGGTCTTCGCTTAATATGTCGACTCGCCGACCACTTGCCAACGTG
CCGAATGCTACCAATTCCCCTCACAGGTCAGGCCTCGTGCCTGCCAAACG
TCTACGTCCAACGAGTAACCAGATTGACATCCCTTACGGCCAGCCTCCTC
CGAAGAAGCAGGTAGTGGACGGTCAGGAGGCGGACGCTCGATCCCCAACC
CGGACCAGGGCGTCCGCATACCAAAACACGGACTCCAAACTGTTCTTGCG
GCGCACGAATAATGCTCAGCCGAGTGCATTCGAAAGGAAACTGGTCGCTG
TGAGAGATAAAGAACGACAGGCACAAATGAAAGGCACGAGGCACGAGAGG
CCTTCTGCGGAGACCCTCGATTCCATCCGGCAGTGGCAGAGGCATTACCG
CAAGGCGTTTCCTCAGTTTGTTTTCTACTTTGATAGCATCCCGGAAGATG
TTCGCAGCAAGAGCTCTAGGCAGGTACTTGCATTGGGAGCGCGTGAAGAA
AAATTCTTCTCGCGTCTAGTGACCCACGTCGTCACGTCTCGTCCTATTCC
TCCAGAAAACGGTCCCACGAATGCACCTGAATACAATGCGGAGTCGGCGG
AGCAAGCGGCGGCGGATGGTTCGCTGCAGACAGTAAACCCGTCCCTGCTC
GAGAAGTGCGCCGATACACACCTTCATATGACCTTGAAAAACGATGCACG
GCGGGAGCAGAAGGGCATGGATGTTTTACACAGAGCCCGCCAGATGGGAA
TGAAGATCTGGGCGATCGAAAAACTGCAGCGCATGATCACGGCGATCAAT
GATGGCGATGTCGGAGGGCATGATGGCCATGCGACGCGAAACAGCAATGC
TGCTGGCGGCCATGCCAGGGCTCGGGGTGAAAATGATCTTTCGCAAGTGC
TTCAGAATGAGCTGAATGGCCCGTCAGATCGCAATCCTCTCTCGGTGTTG
AAGGAGCTGGTTATGTTCAAGGGTCCTTTCATATATGTCCATGACATGGA
CGAGAAGACGCGCCCTGTGATGGTGCGAGAATACCCAAAGGTTGCAAGGC
GGCAGGATGGTATATGGCCGCAATTCCGAAGTGCACGGCTGGGAAAGTGT
CCGTTCATTGAGGACCCGCCTACACAGAAGGACATTGACCGTCAACGTGC
CCGTATAAAAGAGAGGACGGAGAGACAGGAAAGGGACGAAAGAGCTGTTG
CTAATGCTGCTCCTGTACAAGACGTTCCGGACGCGAAACTAAATGCACCA
GAAACTCATAGGAAGGTTACAAAGCACGAGGATAAGACTCCCGAATTGGG
CCAAACAGAAGAGGCACCCCTTGAGCCCCAGCCTGAACTCCAGGACATTC
AGTCGACGAAACAATTATCGCCCAGGAAAAGCTCCGAGAGCTTTGTGCCC
CCGCCTCCTCAACGGAAAGGGCCATTCTTCCATGGCCGTGAACCTGCCGC
ATCAGGCGTACAACCCTCGAATATTACGTCCGCCATTCGTTCGCAGATGG
TTTCATCGACGGCTGCTGCACCTGGTGCCAAGGCTGGCCTGAGCAAGGAA
GTTCATGAACTCAAGAGAAAGGTGCTCGAAAAAGGAAATGGAGGGCTTAC
AGCGGGGACTATGCCTCCATCACACCACGCCGTAGATGGAGCCGCACCGT
TGAAGGCGAAACCATTGGAAAACAGCCTCGGAAATATGCAACCGCCTAAA
AAGCTCGTAAATGTCCCTGAGGAGGAATCAACGCAGTTGGAAAACAACGG
CGCTCCCAAGCGGCGGGCCGGTGATCGGAAAACCGTAATAATACCGAAAA
GGAAGGAGAGACGGAGAGACCCTAAGCCAGGTTACTGTGAGAACTGCAGG
GACAAATTCGATGACTTCGAAGAGCACATTGTAACTCGGAAGCACCGCCG
CTTTGCGACAAACCGAGCGAACTGGGCCGAGCTCGACGCCTTACTTTATC
AGCTGGAGAGGCCTGTGAAATCTGGTGCGGAAGGTGTCCCAGGTTTATAA
ATGGCAGCTGTATTCGTACCACCTTCGCCTCGGTCTTCGCTTAATATGTC
GACTCGCCGACCACTTGCCAACGTGCCGAATGCTACCAATTCCCCTCACA
GGTCAGGCCTCGTGCCTGCCAAACGTCTACGTCCAACGAGTAACCAGATT
GACATCCCTTACGGCCAGCCTCCTCCGAAGAAGCAGGTAGTGGACGGTCA
GGAGGCGGACGCTCGATCCCCAACCCGGACCAGGGCGTCCGCATACCAAA
ACACGGACTCCAAACTGTTCTTGCGGCGCACGAATAATGCTCAGCCGAGT
GCATTCGAAAGGAAACTGGTCGCTGTGAGAGATAAAGAACGACAGGCACA
AATGAAAGGCACGAGGCACGAGAGGCCTTCTGCGGAGACCCTCGATTCCA
TCCGGCAGTGGCAGAGGCATTACCGCAAGGCGTTTCCTCAGTTTGTTTTC
TACTTTGATAGCATCCCGGAAGATGTTCGCAGCAAGAGCTCTAGGCAGGT
ACTTGCATTGGGAGCGCGTGAAGAAAAATTCTTCTCGCGTCTAGTGACCC
ACGTCGTCACGTCTCGTCCTATTCCTCCAGAAAACGGTCCCACGAATGCA
CCTGAATACAATGCGGAGTCGGCGGAGCAAGCGGCGGCGGATGGTTCGCT
GCAGACAGTAAACCCGTCCCTGCTCGAGAAGTGCGCCGATACACACCTTC
ATATGACCTTGAAAAACGATGCACGGCGGGAGCAGAAGGGCATGGATGTT
TTACACAGAGCCCGCCAGATGGGAATGAAGATCTGGGCGATCGAAAAACT
GCAGCGCATGATCACGGCGATCAATGATGGCGATGTCGGAGGGCATGATG
GCCATGCGACGCGAAACAGCAATGCTGCTGGCGGCCATGCCAGGGCTCGG
GGTGAAAATGATCTTTCGCAAGTGCTTCAGAATGAGCTGAATGGCCCGTC
AGATCGCAATCCTCTCTCGGTGTTGAAGGAGCTGGTTATGTTCAAGGGTC
CTTTCATATATGTCCATGACATGGACGAGAAGACGCGCCCTGTGATGGTG
CGAGAATACCCAAAGGTTGCAAGGCGGCAGGATGGTATATGGCCGCAATT
CCGAAGTGCACGGCTGGGAAAGTGTCCGTTCATTGAGGACCCGCCTACAC
AGAAGGACATTGACCGTCAACGTGCCCGTATAAAAGAGAGGACGGAGAGA
CAGGAAAGGGACGAAAGAGCTGTTGCTAATGCTGCTCCTGTACAAGACGT
TCCGGACGCGAAACTAAATGCACCAGAAACTCATAGGAAGGTTACAAAGC
ACGAGGATAAGACTCCCGAATTGGGCCAAACAGAAGAGGCACCCCTTGAG
CCCCAGCCTGAACTCCAGGACATTCAGTCGACGAAACAATTATCGCCCAG
GAAAAGCTCCGAGAGCTTTGTGCCCCCGCCTCCTCAACGGAAAGGGCCAT
TCTTCCATGGCCGTGAACCTGCCGCATCAGGCGTACAACCCTCGAATATT
ACGTCCGCCATTCGTTCGCAGATGGTTTCATCGACGGCTGCTGCACCTGG
TGCCAAGGCTGGCCTGAGCAAGGAAGTTCATGAACTCAAGAGAAAGGTGC
TCGAAAAAGGAAATGGAGGGCTTACAGCGGGGACTATGCCTCCATCACAC
CACGCCGTAGATGGAGCCGCACCGTTGAAGGCGAAACCATTGGAAAACAG
CCTCGGAAATATGCAACCGCCTAAAAAGCTCGTAAATGTCCCTGAGGAGG
AATCAACGCAGTTGGAAAACAACGGCGCTCCCAAGCGGCGGGCCGGTGAT
CGGAAAACCGTAATAATACCGAAAAGGAAGGAGAGACGGAGAGACCCTAA
GCCAGGTTACTGTGAGAACTGCAGGGACAAATTCGATGACTTCGAAGAGC
ACATTGTAACTCGGAAGCACCGCCGCTTTGCGACAAACCGAGCGAACTGG
GCCGAGCTCGACGCCTTACTTTATCAGCTGGAGAGGCCTGTGAAATCTGG
TGCGGAAGGTGTCCCAGGTTTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002325-T1.utr5p1 | KJC3_002325-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002325-T1.utr3p1 | KJC3_002325-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013939 |
| DBxref | InterPro:IPR038545 |
| DBxref | InterPro:IPR036420 |
| DBxref | InterPro:IPR006572 |
| DBxref | PFAM:PF07535 |
| DBxref | PFAM:PF08630 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2269604..2273185 + |
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