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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2504864..2505717+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002412-T1 ID=KJC3_002412-T1|Name=KJC3_002412-T1|organism=Aspergillus niger KJC3|type=mRNA|length=854bp|location=Sequence derived from alignment at ch2:2504864..2505717+ (Aspergillus niger KJC3)
CGTCAGACCCTTCAGTCATGCATTTCCTCCGACCCAAATGGTTCATCGTA
CTCGGGTTCTTTGTCACTACCTCGCCTGCGGTTGAGGTTGACTTGGTCTT
CCCTCGCAGCGACGCATCTTACTCACCCGCCGAGTGGTTCCCATTCGTCT
TTGCTGTGCAGAACACGGAAAGGGCAGAGCTTCTCAATCTCCAGGTGACC
TGCAACATCCGCAAACGCAATGCCACCCTAAAAGATATTGATAACCAATT
ATACCTCAATCATGACTTCAGTTGGACGAATTGGTCGGGCAGCGCAGACC
CTTACCTCGCCTACAACTACATCCACAACGACTTCAACACATCCAATCAT
TGGGTGCTTCTGTGCGTGCTTAGCTGGCAAAGCTGCGATGTGGAGGCGCT
GACCCACGGTCCTTATGCATATGGTGGAGTCTCCGACCACAAGTATCGGT
GGACGATGGGCTTCCATATCGACAATTCCAGCCTCAAAGAAATGGATCTT
GTAGCAGCAACCGCCAATGACACCTGCCCTGGGAGCCAAAATGCCATCTC
CATCAATGTAACAGACAGAGTAATGAACTCACCCCGGTATGGCAACACCG
CACACCGCGAAACGTGTGTTGTTACAACAAATACAACTGCCAGTCCTACG
ACATCTACCCCGGATCCCTGTCGCGTTGCGATAGACGAGGATACTGCTGA
GAGCATGGCATCCGTTCAGCAGCAGCGCTTCTGCTATCTTCCGGTTCCTC
CTGATAACTGTCCTAAAGAGGAGAATGGTGCTACGCCATTGGCTGTACTT
GGCGTAACTGGAATGTTAACGGCAATTGGAGCTCTGGGCTTTGCCGTCTT
GTAG back to topCoding sequence (CDS) from alignment at ch2:2504864..2505717+ >KJC3_002412-T1 ID=KJC3_002412-T1|Name=KJC3_002412-T1|organism=Aspergillus niger KJC3|type=CDS|length=837bp|location=Sequence derived from alignment at ch2:2504864..2505717+ (Aspergillus niger KJC3)
ATGCATTTCCTCCGACCCAAATGGTTCATCGTACTCGGGTTCTTTGTCAC
TACCTCGCCTGCGGTTGAGGTTGACTTGGTCTTCCCTCGCAGCGACGCAT
CTTACTCACCCGCCGAGTGGTTCCCATTCGTCTTTGCTGTGCAGAACACG
GAAAGGGCAGAGCTTCTCAATCTCCAGGTGACCTGCAACATCCGCAAACG
CAATGCCACCCTAAAAGATATTGATAACCAATTATACCTCAATCATGACT
TCAGTTGGACGAATTGGTCGGGCAGCGCAGACCCTTACCTCGCCTACAAC
TACATCCACAACGACTTCAACACATCCAATCATTGGGTGCTTCTGTGCGT
GCTTAGCTGGCAAAGCTGCGATGTGGAGGCGCTGACCCACGGTCCTTATG
CATATGGTGGAGTCTCCGACCACAAGTATCGGTGGACGATGGGCTTCCAT
ATCGACAATTCCAGCCTCAAAGAAATGGATCTTGTAGCAGCAACCGCCAA
TGACACCTGCCCTGGGAGCCAAAATGCCATCTCCATCAATGTAACAGACA
GAGTAATGAACTCACCCCGGTATGGCAACACCGCACACCGCGAAACGTGT
GTTGTTACAACAAATACAACTGCCAGTCCTACGACATCTACCCCGGATCC
CTGTCGCGTTGCGATAGACGAGGATACTGCTGAGAGCATGGCATCCGTTC
AGCAGCAGCGCTTCTGCTATCTTCCGGTTCCTCCTGATAACTGTCCTAAA
GAGGAGAATGGTGCTACGCCATTGGCTGTACTTGGCGTAACTGGAATGTT
AACGGCAATTGGAGCTCTGGGCTTTGCCGTCTTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002412-T1.utr5p1 | KJC3_002412-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2504864..2505717 + |
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