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KJC3_002477-T1, KJC3_002477-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002477-T1
Unique NameKJC3_002477-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2665003..2666709+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002477-T1 ID=KJC3_002477-T1|Name=KJC3_002477-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1707bp|location=Sequence derived from alignment at ch2:2665003..2666709+ (Aspergillus niger KJC3)
CATCGTTCGAAACAAGCTATCTGTAGCCTCTAGCCTTAGTAGATAAAAGA
GAGAGGGAGCCCTGACCGCTGCTAACTTCCCCATCACTTCAATTCCCACC
TCAAACCATCATTGAACCCTCTACCCCATATTACACCGCACATAATGTCC
CCCTCCAAGAAAGACTTCCACGTCGCCATCATTGGCGGCGGCATAGCAGG
CGTCACGCTAGCCATTGCGCTCCACCACCGCAACATTCCCGTAACCATCT
ACGAGCAAGCGCACGAATTCGGCGAAGTAGGCGCCGGCGTCTCCTTCAGC
CCCAACGCCGTTCAAGCCATGAAATACTGCCACGAGGGCATCCACAACGC
ATTTGAGAAAGTCTGCACGCGAAACCTCTGGCCCACCAAGCAAAAAGTCT
GGTTCGACTATCTGGACGGATACAACCACAAGGAAAGCCCCCAAAACGGC
CGCCAAAACATCGAATTCACCATCTCCAACAGTCTCGGCCAGAACGGCGT
CCACCGTGCGCATTTCCTCGACGAACTGATCAAGCTGGTACCCAAGGAGA
TCTCTCGCTTCAACAAGCGACTAGAAGATATCCACGAGCGGATCAGCGAT
GGCAAGCTGATCATGAAGTTCGCCGATGGATCCGAGGATGTTGCGGACTT
GGTCATCGGATGTGATGGGATCAAGTCCCAGGTACGCCAGATCATCGTCG
GTGCGGATCATCCTTCGGCGAAGCCATCGTATACTCACAAGTATGCGTAT
CGCGGTCTGGTGCCGATGGATAAGGCGGTTGAGGCGATTGGAGAGGAATT
GGCTTCGAATTCCTGCATGCATGTAAGTAGCCCAATTCTTTCGACTGGCA
AAGGGGCCTTACTGATGATGATAATAGATGGGTCCCGGCGGCCACATGCT
CACCTTCCCCGTGAACGGCGGTAAAACACTCAACATCGTCGCCTTCCACA
CTACCACCGACGAATGGGCCGAGTACCCCAGACTCACCCGCCAGGGTACC
CGCGACGAGGTCCTCCGCGACTTTGCTGGCTATGGACCTAACGTGACCAT
GTTGCTTAAGCTGACTGATCCTCAACTCAGTGTGGTATGCATTTACCCCC
TTCTACCTCTACGGTCCTACCACTTTCTTCCAAATACTGATGAGTATACA
GTGGGCCATCTTCGACCTAGGCGACCACCCGGTCCCAACATTCTACAAAG
GCCGCGTCGGCATTTCGGGCGACGCCGCGCACGCCACCTCGCCGCACCAC
GGCGCCGGCGCCGGCTTCTGTATCGAGGATACGGCTGTGCTGGCAACGCT
GCTGGAAGACGAGCGGGTGCAGACGCACAAGGACCTTCAGGCCGTGCTGG
CTGCGTTTGACGAGAACCGTCGCGAGCGGTCTCAGTGGCTGGTGCAGAGT
AGTCGGTTCATTGGTGATTGCTATGAGTGGAGGGCTGATGGGGTGGGGAG
CGACTTTAAGAAGATTGAGGAGGCGATCAATTATCGCAATGGAGTCATTG
CGAATGTGGATGTTGGGAAGATGTGTGAGGAGGCGAAGGGGGTGTTGGGG
AGGAAGATTGAGAAGGCTTCGTTGTGAGTAGATTTCAGGGAGGAGAGCTT
GTACGCTGATAGATAGAGGTTTTTGTTGGAATTTTGGTTTCTAGCGAGAT
ATACTAGTTTCTTGGCTTGGGTTTATAGATTAATGCATTTGAGCGATTGA
GATTGGA
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Coding sequence (CDS) from alignment at ch2:2665003..2666709+

>KJC3_002477-T1 ID=KJC3_002477-T1|Name=KJC3_002477-T1|organism=Aspergillus niger KJC3|type=CDS|length=3933bp|location=Sequence derived from alignment at ch2:2665003..2666709+ (Aspergillus niger KJC3)
ATGTCCCCCTCCAAGAAAGACTTCCACGTCGCCATCATTGGCGGCGGCAT
AGCAGGCGTCACGCTAGCCATTGCGCTCCACCACCGCAACATTCCCGTAA
CCATCTACGAGCAAGCGCACGAATTCGGCGAAGTAGGCGCCGGCGTCTCC
TTCAGCCCCAACGCCGTTCAAGCCATGAAATACTGCCACGAGGGCATCCA
CAACGCATTTGAGAAAGTCTGCACGCGAAACCTCTGGCCCACCAAGCAAA
AAGTCTGGTTCGACTATCTGGACGGATACAACCACAAGGAAAGCCCCCAA
AACGGCCGCCAAAACATCGAATTCACCATCTCCAACAGTCTCGGCCAGAA
CGGCGTCCACCGTGCGCATTTCCTCGACGAACTGATCAAGCTGGTACCCA
AGGAGATCTCTCGCTTCAACAAGCGACTAGAAGATATCCACGAGCGGATC
AGCGATGGCAAGCTGATCATGAAGTTCGCCGATGGATCCGAGGATGTTGC
GGACTTGGTCATCGGATGTGATGGGATCAAGTCCCAGGTACGCCAGATCA
TCGTCGGTGCGGATCATCCTTCGGCGAAGCCATCGTATACTCACAAGTAT
GCGTATCGCGGTCTGGTGCCGATGGATAAGGCGGTTGAGGCGATTGGAGA
GGAATTGGCTTCGAATTCCTGCATGCATATGGGTCCCGGCGGCCACATGC
TCACCTTCCCCGTGAACGGCGGTAAAACACTCAACATCGTCGCCTTCCAC
ACTACCACCGACGAATGGGCCGAGTACCCCAGACTCACCCGCCAGGGTAC
CCGCGACGAGGTCCTCCGCGACTTTGCTGGCTATGGACCTAACGTGACCA
TGTTGCTTAAGCTGACTGATCCTCAACTCAGTGTGTGGGCCATCTTCGAC
CTAGGCGACCACCCGGTCCCAACATTCTACAAAGGCCGCGTCGGCATTTC
GGGCGACGCCGCGCACGCCACCTCGCCGCACCACGGCGCCGGCGCCGGCT
TCTGTATCGAGGATACGGCTGTGCTGGCAACGCTGCTGGAAGACGAGCGG
GTGCAGACGCACAAGGACCTTCAGGCCGTGCTGGCTGCGTTTGACGAGAA
CCGTCGCGAGCGGTCTCAGTGGCTGGTGCAGAGTAGTCGGTTCATTGGTG
ATTGCTATGAGTGGAGGGCTGATGGGGTGGGGAGCGACTTTAAGAAGATT
GAGGAGGCGATCAATTATCGCAATGGAGTCATTGCGAATGTGGATGTTGG
GAAGATGTGTGAGGAGGCGAAGGGGGTGTTGGGGAGGAAGATTGAGAAGG
CTTCGTTGTGAATGTCCCCCTCCAAGAAAGACTTCCACGTCGCCATCATT
GGCGGCGGCATAGCAGGCGTCACGCTAGCCATTGCGCTCCACCACCGCAA
CATTCCCGTAACCATCTACGAGCAAGCGCACGAATTCGGCGAAGTAGGCG
CCGGCGTCTCCTTCAGCCCCAACGCCGTTCAAGCCATGAAATACTGCCAC
GAGGGCATCCACAACGCATTTGAGAAAGTCTGCACGCGAAACCTCTGGCC
CACCAAGCAAAAAGTCTGGTTCGACTATCTGGACGGATACAACCACAAGG
AAAGCCCCCAAAACGGCCGCCAAAACATCGAATTCACCATCTCCAACAGT
CTCGGCCAGAACGGCGTCCACCGTGCGCATTTCCTCGACGAACTGATCAA
GCTGGTACCCAAGGAGATCTCTCGCTTCAACAAGCGACTAGAAGATATCC
ACGAGCGGATCAGCGATGGCAAGCTGATCATGAAGTTCGCCGATGGATCC
GAGGATGTTGCGGACTTGGTCATCGGATGTGATGGGATCAAGTCCCAGGT
ACGCCAGATCATCGTCGGTGCGGATCATCCTTCGGCGAAGCCATCGTATA
CTCACAAGTATGCGTATCGCGGTCTGGTGCCGATGGATAAGGCGGTTGAG
GCGATTGGAGAGGAATTGGCTTCGAATTCCTGCATGCATATGGGTCCCGG
CGGCCACATGCTCACCTTCCCCGTGAACGGCGGTAAAACACTCAACATCG
TCGCCTTCCACACTACCACCGACGAATGGGCCGAGTACCCCAGACTCACC
CGCCAGGGTACCCGCGACGAGGTCCTCCGCGACTTTGCTGGCTATGGACC
TAACGTGACCATGTTGCTTAAGCTGACTGATCCTCAACTCAGTGTGTGGG
CCATCTTCGACCTAGGCGACCACCCGGTCCCAACATTCTACAAAGGCCGC
GTCGGCATTTCGGGCGACGCCGCGCACGCCACCTCGCCGCACCACGGCGC
CGGCGCCGGCTTCTGTATCGAGGATACGGCTGTGCTGGCAACGCTGCTGG
AAGACGAGCGGGTGCAGACGCACAAGGACCTTCAGGCCGTGCTGGCTGCG
TTTGACGAGAACCGTCGCGAGCGGTCTCAGTGGCTGGTGCAGAGTAGTCG
GTTCATTGGTGATTGCTATGAGTGGAGGGCTGATGGGGTGGGGAGCGACT
TTAAGAAGATTGAGGAGGCGATCAATTATCGCAATGGAGTCATTGCGAAT
GTGGATGTTGGGAAGATGTGTGAGGAGGCGAAGGGGGTGTTGGGGAGGAA
GATTGAGAAGGCTTCGTTGTGAATGTCCCCCTCCAAGAAAGACTTCCACG
TCGCCATCATTGGCGGCGGCATAGCAGGCGTCACGCTAGCCATTGCGCTC
CACCACCGCAACATTCCCGTAACCATCTACGAGCAAGCGCACGAATTCGG
CGAAGTAGGCGCCGGCGTCTCCTTCAGCCCCAACGCCGTTCAAGCCATGA
AATACTGCCACGAGGGCATCCACAACGCATTTGAGAAAGTCTGCACGCGA
AACCTCTGGCCCACCAAGCAAAAAGTCTGGTTCGACTATCTGGACGGATA
CAACCACAAGGAAAGCCCCCAAAACGGCCGCCAAAACATCGAATTCACCA
TCTCCAACAGTCTCGGCCAGAACGGCGTCCACCGTGCGCATTTCCTCGAC
GAACTGATCAAGCTGGTACCCAAGGAGATCTCTCGCTTCAACAAGCGACT
AGAAGATATCCACGAGCGGATCAGCGATGGCAAGCTGATCATGAAGTTCG
CCGATGGATCCGAGGATGTTGCGGACTTGGTCATCGGATGTGATGGGATC
AAGTCCCAGGTACGCCAGATCATCGTCGGTGCGGATCATCCTTCGGCGAA
GCCATCGTATACTCACAAGTATGCGTATCGCGGTCTGGTGCCGATGGATA
AGGCGGTTGAGGCGATTGGAGAGGAATTGGCTTCGAATTCCTGCATGCAT
ATGGGTCCCGGCGGCCACATGCTCACCTTCCCCGTGAACGGCGGTAAAAC
ACTCAACATCGTCGCCTTCCACACTACCACCGACGAATGGGCCGAGTACC
CCAGACTCACCCGCCAGGGTACCCGCGACGAGGTCCTCCGCGACTTTGCT
GGCTATGGACCTAACGTGACCATGTTGCTTAAGCTGACTGATCCTCAACT
CAGTGTGTGGGCCATCTTCGACCTAGGCGACCACCCGGTCCCAACATTCT
ACAAAGGCCGCGTCGGCATTTCGGGCGACGCCGCGCACGCCACCTCGCCG
CACCACGGCGCCGGCGCCGGCTTCTGTATCGAGGATACGGCTGTGCTGGC
AACGCTGCTGGAAGACGAGCGGGTGCAGACGCACAAGGACCTTCAGGCCG
TGCTGGCTGCGTTTGACGAGAACCGTCGCGAGCGGTCTCAGTGGCTGGTG
CAGAGTAGTCGGTTCATTGGTGATTGCTATGAGTGGAGGGCTGATGGGGT
GGGGAGCGACTTTAAGAAGATTGAGGAGGCGATCAATTATCGCAATGGAG
TCATTGCGAATGTGGATGTTGGGAAGATGTGTGAGGAGGCGAAGGGGGTG
TTGGGGAGGAAGATTGAGAAGGCTTCGTTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002477KJC3_002477Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002477-T1KJC3_002477-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002477-T1.utr5p1KJC3_002477-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002477-T1.exon1KJC3_002477-T1.exon1Aspergillus niger KJC3exon
KJC3_002477-T1.exon2KJC3_002477-T1.exon2Aspergillus niger KJC3exon
KJC3_002477-T1.exon3KJC3_002477-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002477-T1.cdsKJC3_002477-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002477-T1.utr3p1KJC3_002477-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002938
DBxrefInterPro:IPR036188
DBxrefPFAM:PF13450
DBxrefPFAM:PF01494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2665003..2666709 +
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