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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2968922..2971359+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002577-T1 ID=KJC3_002577-T1|Name=KJC3_002577-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2438bp|location=Sequence derived from alignment at ch2:2968922..2971359+ (Aspergillus niger KJC3)
CTTGTTGCTTGTGATTGCAGTCCAAACAAACCCCGAAGGCTGGCGCATGT
CACACCAGTCCATCCTGTCGGGCTCCAAAGGGACAAAATGGGTAGCAAAA
AGAATGAGGCTCAAAATACTCTTCATTAGAGCACTTCATATCTTACTGCA
TATAAGTCACCTCCGGCAAATGCACCAAAATTGCATGGCATCCTCCTCAT
CTGTCATTCCTTCAATCCTTCCTTCCTATGAACTTCAAAATGCTGAGTAG
CTCAACGAGTAAGTCAGGTTTGATTGGAGTTTATGCAAAATGAAGCTCAC
TGAGTATATTCTCTCCAGTTCAAAACGCCTCTCCAGGCTCTCTTTGCGAT
GTATTTAACCTCTATCAAACAAAGCCAGATAATAGGGGTCGCACATCGTG
GACTAAAGAACTCCCTGAAAATCTGGTCGAACCGGCCGAGGGCGCTGAAT
CAAGCTCTTACGCGATCATTGTGAGAAACATCAAATGTTACGATGGTCGC
AAGAGTCTTACGATTCATTCAATTGTACTGCAAAGTGAACCGCTCAAGAA
GTTTCTCACTCCTGTAATGGCGGGATATCCAGGACTTACGATGAGCCTGG
ACCGAATCGAGTTCAGCAAGCCATTCAAACCTTTCGTTCATCGCTGGGAG
AACTTCACAGCCGCTCGAGAGAGTGAACAAGATGCGACGACCAAGGCACA
TGTCGACCTGCTGTATGGGCTTCTAGAAAGCGAACTACATGATACTATCT
CCAGGAAGTCCGATCTTATCTCAAACGGTGTCGTGACTCACGCCTTGCTT
TGGACCCTTTTCCAGCCAGGTGACATCGTTTTTAGTGTCTTGGATAATCG
ACCCCGTGCTTTCATTTGTGGAACAGGCGATATGGATTCTCGAACCGGGA
CGTTCGAACTGAACGGAAAGTACATCGACTTTGATGGTGACAAATTTGGG
TTTTCAACATATGAGTTCCAGCTGGAGGCATTCGAAGGAACATGCCCTAT
CACGGATTTGTCTGTAGCACCCCTGGCATATCACAAAAACAGGGATGCGA
TTGAGAAAGAATTATTATTGCGTGGAAGCCTCTGGGAGAGCCTGAGAGGA
TACCATTACAAGCAATATGATGGAGTCGGCAAGGGATACCTTTTCGGTCG
TGAGGTAAAACTCAACATCACAAGTCGCATTGTAATTGACACGGCGGCAT
ATATCACGTTCAATCCTAACGAAGAATTTCATTTGTCAAATACCATCGCG
GGAGAGCTTTCCGAGGTTCAAAGGATGATAGCCACACCGATGTTGCGTGG
TTATGCTCTCAAAGACAAGAAATGGCTCGAGTTCTTTGTCGACAATGTCA
CAGACATTACCTGGAACGCGCAAGCGTTTCAATCCTTGGTCCTGCCAGAC
AATCAGCAACATTTGAAGAAACTCATCCTTGCCGTTGCCAAGTCGAAGTC
GAATGGCCTTGAAGTTTTTGATGATGTCGTCCAGGGCAAAGGACGTGGCG
TTATTATGCTTCTCCGTGGTCCGCCCGGAGTGGGCAAAACTTTGACGGCT
GAGGGTGTTGCAGAGGTCATGAAAGTACCTCTATACGTTTTGAGTGCGGC
AGACCTTGGTACAAGTCCTTCAAGAGTTGAAGAAAGATTGAAGGACGTTC
TCTCTATTGTTCCCAAATGGGGAGCTGTCCTTCTTCTTGACGAGGCAGAT
GTTTTTATGGAGGCCCGCAATTCAACTGATCTCGCGAGAAACGAGTTAGT
TTCCATATTCCTTAGGGTTTTGGAATACTATGAGGTAATATATAAAGGTC
CTCTCGCTCTCCTGCTCGCACAGTATCTCACAGACTCCAGGGGATTTTAT
TTCTTACCAGTAACCGTGCCGAAAACATGGACCCGGCATTTGAATCCCGA
ATTCACGTGTCGATTTGCTACCCGGAACTTACTGAGACAACGAGACGTCA
GATTTGGATGCAGTTCCTGGCTGCTCCAAACGTGGGAAAATTCTCCAACG
AACAGCTTGACGAAATTGCGAAGTTGGAGTTGAATGGCCGACAGATCAAG
AATGTGCTCCGAACCGCCCATCTGCTTGCCCAGGAGGAAAACACCAGCGT
CAGCTATGAAGATGTTCAAACGATCCTGAGTTTGAGATCCGTTTAGCGCC
ACCATGGTCAATTGAGTATCTGCTTTCTTTTGTAGTGACAATTCGAACTT
GCAGCTCTCAGTCTTTCACATACTGTAGTGCGACAATTTTGAAATTCTTT
CTTTCATTGTTTCTTTCGTTTTCACTTGTTTTCCTCTGGTTTTCTTCGGG
AGACAGTACAACTGATGGCACGGATTCGATGACCACATGAGTCTTTTCCC
CCAGCTTGCGCATGTATATCCTCAAGAGCCTACTTTACCAAAGCTTGCTA
CGTACTTCGCAATAATATATGTTTAGGTGATGAACTAA back to topCoding sequence (CDS) from alignment at ch2:2968922..2971359+ >KJC3_002577-T1 ID=KJC3_002577-T1|Name=KJC3_002577-T1|organism=Aspergillus niger KJC3|type=CDS|length=5409bp|location=Sequence derived from alignment at ch2:2968922..2971359+ (Aspergillus niger KJC3)
ATGAACTTCAAAATGCTGAGTAGCTCAACGATTCAAAACGCCTCTCCAGG
CTCTCTTTGCGATGTATTTAACCTCTATCAAACAAAGCCAGATAATAGGG
GTCGCACATCGTGGACTAAAGAACTCCCTGAAAATCTGGTCGAACCGGCC
GAGGGCGCTGAATCAAGCTCTTACGCGATCATTGTGAGAAACATCAAATG
TTACGATGGTCGCAAGAGTCTTACGATTCATTCAATTGTACTGCAAAGTG
AACCGCTCAAGAAGTTTCTCACTCCTGTAATGGCGGGATATCCAGGACTT
ACGATGAGCCTGGACCGAATCGAGTTCAGCAAGCCATTCAAACCTTTCGT
TCATCGCTGGGAGAACTTCACAGCCGCTCGAGAGAGTGAACAAGATGCGA
CGACCAAGGCACATGTCGACCTGCTGTATGGGCTTCTAGAAAGCGAACTA
CATGATACTATCTCCAGGAAGTCCGATCTTATCTCAAACGGTGTCGTGAC
TCACGCCTTGCTTTGGACCCTTTTCCAGCCAGGTGACATCGTTTTTAGTG
TCTTGGATAATCGACCCCGTGCTTTCATTTGTGGAACAGGCGATATGGAT
TCTCGAACCGGGACGTTCGAACTGAACGGAAAGTACATCGACTTTGATGG
TGACAAATTTGGGTTTTCAACATATGAGTTCCAGCTGGAGGCATTCGAAG
GAACATGCCCTATCACGGATTTGTCTGTAGCACCCCTGGCATATCACAAA
AACAGGGATGCGATTGAGAAAGAATTATTATTGCGTGGAAGCCTCTGGGA
GAGCCTGAGAGGATACCATTACAAGCAATATGATGGAGTCGGCAAGGGAT
ACCTTTTCGGTCGTGAGGTAAAACTCAACATCACAAGTCGCATTGTAATT
GACACGGCGGCATATATCACGTTCAATCCTAACGAAGAATTTCATTTGTC
AAATACCATCGCGGGAGAGCTTTCCGAGGTTCAAAGGATGATAGCCACAC
CGATGTTGCGTGGTTATGCTCTCAAAGACAAGAAATGGCTCGAGTTCTTT
GTCGACAATGTCACAGACATTACCTGGAACGCGCAAGCGTTTCAATCCTT
GGTCCTGCCAGACAATCAGCAACATTTGAAGAAACTCATCCTTGCCGTTG
CCAAGTCGAAGTCGAATGGCCTTGAAGTTTTTGATGATGTCGTCCAGGGC
AAAGGACGTGGCGTTATTATGCTTCTCCGTGGTCCGCCCGGAGTGGGCAA
AACTTTGACGGCTGAGGGTGTTGCAGAGGTCATGAAAGTACCTCTATACG
TTTTGAGTGCGGCAGACCTTGGTACAAGTCCTTCAAGAGTTGAAGAAAGA
TTGAAGGACGTTCTCTCTATTGTTCCCAAATGGGGAGCTGTCCTTCTTCT
TGACGAGGCAGATGTTTTTATGGAGGCCCGCAATTCAACTGATCTCGCGA
GAAACGAGTTAGTTTCCATATTCCTTAGGGTTTTGGAATACTATGAGGGG
ATTTTATTTCTTACCAGTAACCGTGCCGAAAACATGGACCCGGCATTTGA
ATCCCGAATTCACGTGTCGATTTGCTACCCGGAACTTACTGAGACAACGA
GACGTCAGATTTGGATGCAGTTCCTGGCTGCTCCAAACGTGGGAAAATTC
TCCAACGAACAGCTTGACGAAATTGCGAAGTTGGAGTTGAATGGCCGACA
GATCAAGAATGTGCTCCGAACCGCCCATCTGCTTGCCCAGGAGGAAAACA
CCAGCGTCAGCTATGAAGATGTTCAAACGATCCTGAGTTTGAGATCCGTT
TAGATGAACTTCAAAATGCTGAGTAGCTCAACGATTCAAAACGCCTCTCC
AGGCTCTCTTTGCGATGTATTTAACCTCTATCAAACAAAGCCAGATAATA
GGGGTCGCACATCGTGGACTAAAGAACTCCCTGAAAATCTGGTCGAACCG
GCCGAGGGCGCTGAATCAAGCTCTTACGCGATCATTGTGAGAAACATCAA
ATGTTACGATGGTCGCAAGAGTCTTACGATTCATTCAATTGTACTGCAAA
GTGAACCGCTCAAGAAGTTTCTCACTCCTGTAATGGCGGGATATCCAGGA
CTTACGATGAGCCTGGACCGAATCGAGTTCAGCAAGCCATTCAAACCTTT
CGTTCATCGCTGGGAGAACTTCACAGCCGCTCGAGAGAGTGAACAAGATG
CGACGACCAAGGCACATGTCGACCTGCTGTATGGGCTTCTAGAAAGCGAA
CTACATGATACTATCTCCAGGAAGTCCGATCTTATCTCAAACGGTGTCGT
GACTCACGCCTTGCTTTGGACCCTTTTCCAGCCAGGTGACATCGTTTTTA
GTGTCTTGGATAATCGACCCCGTGCTTTCATTTGTGGAACAGGCGATATG
GATTCTCGAACCGGGACGTTCGAACTGAACGGAAAGTACATCGACTTTGA
TGGTGACAAATTTGGGTTTTCAACATATGAGTTCCAGCTGGAGGCATTCG
AAGGAACATGCCCTATCACGGATTTGTCTGTAGCACCCCTGGCATATCAC
AAAAACAGGGATGCGATTGAGAAAGAATTATTATTGCGTGGAAGCCTCTG
GGAGAGCCTGAGAGGATACCATTACAAGCAATATGATGGAGTCGGCAAGG
GATACCTTTTCGGTCGTGAGGTAAAACTCAACATCACAAGTCGCATTGTA
ATTGACACGGCGGCATATATCACGTTCAATCCTAACGAAGAATTTCATTT
GTCAAATACCATCGCGGGAGAGCTTTCCGAGGTTCAAAGGATGATAGCCA
CACCGATGTTGCGTGGTTATGCTCTCAAAGACAAGAAATGGCTCGAGTTC
TTTGTCGACAATGTCACAGACATTACCTGGAACGCGCAAGCGTTTCAATC
CTTGGTCCTGCCAGACAATCAGCAACATTTGAAGAAACTCATCCTTGCCG
TTGCCAAGTCGAAGTCGAATGGCCTTGAAGTTTTTGATGATGTCGTCCAG
GGCAAAGGACGTGGCGTTATTATGCTTCTCCGTGGTCCGCCCGGAGTGGG
CAAAACTTTGACGGCTGAGGGTGTTGCAGAGGTCATGAAAGTACCTCTAT
ACGTTTTGAGTGCGGCAGACCTTGGTACAAGTCCTTCAAGAGTTGAAGAA
AGATTGAAGGACGTTCTCTCTATTGTTCCCAAATGGGGAGCTGTCCTTCT
TCTTGACGAGGCAGATGTTTTTATGGAGGCCCGCAATTCAACTGATCTCG
CGAGAAACGAGTTAGTTTCCATATTCCTTAGGGTTTTGGAATACTATGAG
GGGATTTTATTTCTTACCAGTAACCGTGCCGAAAACATGGACCCGGCATT
TGAATCCCGAATTCACGTGTCGATTTGCTACCCGGAACTTACTGAGACAA
CGAGACGTCAGATTTGGATGCAGTTCCTGGCTGCTCCAAACGTGGGAAAA
TTCTCCAACGAACAGCTTGACGAAATTGCGAAGTTGGAGTTGAATGGCCG
ACAGATCAAGAATGTGCTCCGAACCGCCCATCTGCTTGCCCAGGAGGAAA
ACACCAGCGTCAGCTATGAAGATGTTCAAACGATCCTGAGTTTGAGATCC
GTTTAGATGAACTTCAAAATGCTGAGTAGCTCAACGATTCAAAACGCCTC
TCCAGGCTCTCTTTGCGATGTATTTAACCTCTATCAAACAAAGCCAGATA
ATAGGGGTCGCACATCGTGGACTAAAGAACTCCCTGAAAATCTGGTCGAA
CCGGCCGAGGGCGCTGAATCAAGCTCTTACGCGATCATTGTGAGAAACAT
CAAATGTTACGATGGTCGCAAGAGTCTTACGATTCATTCAATTGTACTGC
AAAGTGAACCGCTCAAGAAGTTTCTCACTCCTGTAATGGCGGGATATCCA
GGACTTACGATGAGCCTGGACCGAATCGAGTTCAGCAAGCCATTCAAACC
TTTCGTTCATCGCTGGGAGAACTTCACAGCCGCTCGAGAGAGTGAACAAG
ATGCGACGACCAAGGCACATGTCGACCTGCTGTATGGGCTTCTAGAAAGC
GAACTACATGATACTATCTCCAGGAAGTCCGATCTTATCTCAAACGGTGT
CGTGACTCACGCCTTGCTTTGGACCCTTTTCCAGCCAGGTGACATCGTTT
TTAGTGTCTTGGATAATCGACCCCGTGCTTTCATTTGTGGAACAGGCGAT
ATGGATTCTCGAACCGGGACGTTCGAACTGAACGGAAAGTACATCGACTT
TGATGGTGACAAATTTGGGTTTTCAACATATGAGTTCCAGCTGGAGGCAT
TCGAAGGAACATGCCCTATCACGGATTTGTCTGTAGCACCCCTGGCATAT
CACAAAAACAGGGATGCGATTGAGAAAGAATTATTATTGCGTGGAAGCCT
CTGGGAGAGCCTGAGAGGATACCATTACAAGCAATATGATGGAGTCGGCA
AGGGATACCTTTTCGGTCGTGAGGTAAAACTCAACATCACAAGTCGCATT
GTAATTGACACGGCGGCATATATCACGTTCAATCCTAACGAAGAATTTCA
TTTGTCAAATACCATCGCGGGAGAGCTTTCCGAGGTTCAAAGGATGATAG
CCACACCGATGTTGCGTGGTTATGCTCTCAAAGACAAGAAATGGCTCGAG
TTCTTTGTCGACAATGTCACAGACATTACCTGGAACGCGCAAGCGTTTCA
ATCCTTGGTCCTGCCAGACAATCAGCAACATTTGAAGAAACTCATCCTTG
CCGTTGCCAAGTCGAAGTCGAATGGCCTTGAAGTTTTTGATGATGTCGTC
CAGGGCAAAGGACGTGGCGTTATTATGCTTCTCCGTGGTCCGCCCGGAGT
GGGCAAAACTTTGACGGCTGAGGGTGTTGCAGAGGTCATGAAAGTACCTC
TATACGTTTTGAGTGCGGCAGACCTTGGTACAAGTCCTTCAAGAGTTGAA
GAAAGATTGAAGGACGTTCTCTCTATTGTTCCCAAATGGGGAGCTGTCCT
TCTTCTTGACGAGGCAGATGTTTTTATGGAGGCCCGCAATTCAACTGATC
TCGCGAGAAACGAGTTAGTTTCCATATTCCTTAGGGTTTTGGAATACTAT
GAGGGGATTTTATTTCTTACCAGTAACCGTGCCGAAAACATGGACCCGGC
ATTTGAATCCCGAATTCACGTGTCGATTTGCTACCCGGAACTTACTGAGA
CAACGAGACGTCAGATTTGGATGCAGTTCCTGGCTGCTCCAAACGTGGGA
AAATTCTCCAACGAACAGCTTGACGAAATTGCGAAGTTGGAGTTGAATGG
CCGACAGATCAAGAATGTGCTCCGAACCGCCCATCTGCTTGCCCAGGAGG
AAAACACCAGCGTCAGCTATGAAGATGTTCAAACGATCCTGAGTTTGAGA
TCCGTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002577-T1.utr5p1 | KJC3_002577-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002577-T1.utr3p1 | KJC3_002577-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.14 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR003959 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF00004 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2968922..2971359 + |
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