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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2975199..2976842+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002579-T1 ID=KJC3_002579-T1|Name=KJC3_002579-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1644bp|location=Sequence derived from alignment at ch2:2975199..2976842+ (Aspergillus niger KJC3)
GACACGCCCGCAATCCTATCCAAATTTTCTTTTCACACCACTACCATGTC
CAGCGAAAATTTCACTATAACCGAGCATGTCGTCCCGGGTTGTCACATTC
GAGAGTATCCCGGAAGCACCGTCAATCAGGAGGATGTTTTGCACCTACAT
GTTAAACAGTACACCCCCAGAAACCAAGCCCAGCCAGTGCCGAAAGATGC
CGTCACAATCATTGCCGCTCATGGAGCAGCTCTGCCCAAGGTAGTTCCAT
TCCTGTCCAACCAAGTGGAACCATTGCTCTGTGTCATTCTTCGAGGCTGA
TACCTGATGGTCAGGAATTGTACGAACCGCTGTGGGACACACTGTTGGAG
CAGGCCAACAATTTTCAGATCCGTAGCATATGGGTCGCCGATTGCGCCAG
TATGAACATAAGCGGAATTCTAAATGAAGACAAACTCAGCATGGACTGTA
AGCTACTTACCCTCTTATATACCCGCCCTCAACCAATGGCTAATGAAGAG
TCAGGTTCCTGGATGGATCATTCTCGGGATCTCTTCCTAATGATCAACCA
GTTTCGAGAGCAAATGCCTCGTCCGATCGTAGGAGTCGGACACAGCTTTG
GTGGAAATATCATGTGCGATCCATTCCCCCCACACTTTCCCCCCCTCCTC
ATCTTTTTCATACAGACAACATTGATTGACTTTCTTTCTCGTCATTCTTT
CTTTGTTTTAACAGTACCAATCTGGCGTATCTTCACCCGCGACTCTTCAC
CACATTGTTACTGATTGACCCTGTAATCCAATTGACACCCCCGCCCATGG
GGTTCGGCACCGACGCTACCGGGGCGATCAACTATACCCTTTATCGCAAG
GATGTCTGGCCCAGCCGCGAGGTGGCTCTCCGTGCCAATCGCGCTTTGAC
TCATGGCTGGGACCCCCGCTGCGTGGCTCGCATGGCGCAATACGGGTTCC
GCGATCTGCCCACCGCGCTGTATCCGGACGTGGATGCAGTGAAGGCGAAA
TTTCAAAGCACTACATCATCTACTTCTCAGCCTCCAGCACAATCACACGA
TGCCACGACCAACAATACAACCCCAGTGACTCTTACAACCACCAAGTATC
ACGACCTCCTCGCCCAGATCCGCGAGAACTTCAGCGCCCGGTCCCCGGAG
ACGGGCCGGATCTCCATCCCACGGGCCACCCACGCGGATCTCGACCCGCT
CGCCGCGTTTATCCCGATGTATCGCCCCGAGCCCCGGAGCGTCTTCCTTC
GGCTGCCAACTCTACGACCATCGTGTCTGTGGGTGCTGGGGGGTGCAACC
TTTCTCAAGCTTGACGAGATGCGCGAGGGGATCAAGACCTGCGGCACCGG
GTTGGGAGGGAGTGGGGGCATCCCCGATGGGAGGGTCCGGGAGGTGACGC
TAGCAGGGCTGGGCCATCTGATGCCGTTTCAGGCGGTTCAACAGGTTGCA
GAGCCCTGTGTGGCGTGGCTGGAGTCGGAGATGACACGTTTTCGCGAGGC
TGAGAGGCTATGGGCGGAGGAGCAAAAGGGACGCAGTCATCTCACCTTAG
AGGAGACGTGGTATCGAGTTTTGAAGCCTGTAACCGTTACAGGTGGGAAA
GGGAAAGCCCGGAAAGCCAGGAAGGACAAGCTGTAACTAGTAGG back to topCoding sequence (CDS) from alignment at ch2:2975199..2976842+ >KJC3_002579-T1 ID=KJC3_002579-T1|Name=KJC3_002579-T1|organism=Aspergillus niger KJC3|type=CDS|length=5436bp|location=Sequence derived from alignment at ch2:2975199..2976842+ (Aspergillus niger KJC3)
ATGTCCAGCGAAAATTTCACTATAACCGAGCATGTCGTCCCGGGTTGTCA
CATTCGAGAGTATCCCGGAAGCACCGTCAATCAGGAGGATGTTTTGCACC
TACATGTTAAACAGTACACCCCCAGAAACCAAGCCCAGCCAGTGCCGAAA
GATGCCGTCACAATCATTGCCGCTCATGGAGCAGCTCTGCCCAAGGAATT
GTACGAACCGCTGTGGGACACACTGTTGGAGCAGGCCAACAATTTTCAGA
TCCGTAGCATATGGGTCGCCGATTGCGCCAGTATGAACATAAGCGGAATT
CTAAATGAAGACAAACTCAGCATGGACTGTTCCTGGATGGATCATTCTCG
GGATCTCTTCCTAATGATCAACCAGTTTCGAGAGCAAATGCCTCGTCCGA
TCGTAGGAGTCGGACACAGCTTTGGTGGAAATATCATTACCAATCTGGCG
TATCTTCACCCGCGACTCTTCACCACATTGTTACTGATTGACCCTGTAAT
CCAATTGACACCCCCGCCCATGGGGTTCGGCACCGACGCTACCGGGGCGA
TCAACTATACCCTTTATCGCAAGGATGTCTGGCCCAGCCGCGAGGTGGCT
CTCCGTGCCAATCGCGCTTTGACTCATGGCTGGGACCCCCGCTGCGTGGC
TCGCATGGCGCAATACGGGTTCCGCGATCTGCCCACCGCGCTGTATCCGG
ACGTGGATGCAGTGAAGGCGAAATTTCAAAGCACTACATCATCTACTTCT
CAGCCTCCAGCACAATCACACGATGCCACGACCAACAATACAACCCCAGT
GACTCTTACAACCACCAAGTATCACGACCTCCTCGCCCAGATCCGCGAGA
ACTTCAGCGCCCGGTCCCCGGAGACGGGCCGGATCTCCATCCCACGGGCC
ACCCACGCGGATCTCGACCCGCTCGCCGCGTTTATCCCGATGTATCGCCC
CGAGCCCCGGAGCGTCTTCCTTCGGCTGCCAACTCTACGACCATCGTGTC
TGTGGGTGCTGGGGGGTGCAACCTTTCTCAAGCTTGACGAGATGCGCGAG
GGGATCAAGACCTGCGGCACCGGGTTGGGAGGGAGTGGGGGCATCCCCGA
TGGGAGGGTCCGGGAGGTGACGCTAGCAGGGCTGGGCCATCTGATGCCGT
TTCAGGCGGTTCAACAGGTTGCAGAGCCCTGTGTGGCGTGGCTGGAGTCG
GAGATGACACGTTTTCGCGAGGCTGAGAGGCTATGGGCGGAGGAGCAAAA
GGGACGCAGTCATCTCACCTTAGAGGAGACGTGGTATCGAGTTTTGAAGC
CTGTAACCGTTACAGGTGGGAAAGGGAAAGCCCGGAAAGCCAGGAAGGAC
AAGCTGTAAATGTCCAGCGAAAATTTCACTATAACCGAGCATGTCGTCCC
GGGTTGTCACATTCGAGAGTATCCCGGAAGCACCGTCAATCAGGAGGATG
TTTTGCACCTACATGTTAAACAGTACACCCCCAGAAACCAAGCCCAGCCA
GTGCCGAAAGATGCCGTCACAATCATTGCCGCTCATGGAGCAGCTCTGCC
CAAGGAATTGTACGAACCGCTGTGGGACACACTGTTGGAGCAGGCCAACA
ATTTTCAGATCCGTAGCATATGGGTCGCCGATTGCGCCAGTATGAACATA
AGCGGAATTCTAAATGAAGACAAACTCAGCATGGACTGTTCCTGGATGGA
TCATTCTCGGGATCTCTTCCTAATGATCAACCAGTTTCGAGAGCAAATGC
CTCGTCCGATCGTAGGAGTCGGACACAGCTTTGGTGGAAATATCATTACC
AATCTGGCGTATCTTCACCCGCGACTCTTCACCACATTGTTACTGATTGA
CCCTGTAATCCAATTGACACCCCCGCCCATGGGGTTCGGCACCGACGCTA
CCGGGGCGATCAACTATACCCTTTATCGCAAGGATGTCTGGCCCAGCCGC
GAGGTGGCTCTCCGTGCCAATCGCGCTTTGACTCATGGCTGGGACCCCCG
CTGCGTGGCTCGCATGGCGCAATACGGGTTCCGCGATCTGCCCACCGCGC
TGTATCCGGACGTGGATGCAGTGAAGGCGAAATTTCAAAGCACTACATCA
TCTACTTCTCAGCCTCCAGCACAATCACACGATGCCACGACCAACAATAC
AACCCCAGTGACTCTTACAACCACCAAGTATCACGACCTCCTCGCCCAGA
TCCGCGAGAACTTCAGCGCCCGGTCCCCGGAGACGGGCCGGATCTCCATC
CCACGGGCCACCCACGCGGATCTCGACCCGCTCGCCGCGTTTATCCCGAT
GTATCGCCCCGAGCCCCGGAGCGTCTTCCTTCGGCTGCCAACTCTACGAC
CATCGTGTCTGTGGGTGCTGGGGGGTGCAACCTTTCTCAAGCTTGACGAG
ATGCGCGAGGGGATCAAGACCTGCGGCACCGGGTTGGGAGGGAGTGGGGG
CATCCCCGATGGGAGGGTCCGGGAGGTGACGCTAGCAGGGCTGGGCCATC
TGATGCCGTTTCAGGCGGTTCAACAGGTTGCAGAGCCCTGTGTGGCGTGG
CTGGAGTCGGAGATGACACGTTTTCGCGAGGCTGAGAGGCTATGGGCGGA
GGAGCAAAAGGGACGCAGTCATCTCACCTTAGAGGAGACGTGGTATCGAG
TTTTGAAGCCTGTAACCGTTACAGGTGGGAAAGGGAAAGCCCGGAAAGCC
AGGAAGGACAAGCTGTAAATGTCCAGCGAAAATTTCACTATAACCGAGCA
TGTCGTCCCGGGTTGTCACATTCGAGAGTATCCCGGAAGCACCGTCAATC
AGGAGGATGTTTTGCACCTACATGTTAAACAGTACACCCCCAGAAACCAA
GCCCAGCCAGTGCCGAAAGATGCCGTCACAATCATTGCCGCTCATGGAGC
AGCTCTGCCCAAGGAATTGTACGAACCGCTGTGGGACACACTGTTGGAGC
AGGCCAACAATTTTCAGATCCGTAGCATATGGGTCGCCGATTGCGCCAGT
ATGAACATAAGCGGAATTCTAAATGAAGACAAACTCAGCATGGACTGTTC
CTGGATGGATCATTCTCGGGATCTCTTCCTAATGATCAACCAGTTTCGAG
AGCAAATGCCTCGTCCGATCGTAGGAGTCGGACACAGCTTTGGTGGAAAT
ATCATTACCAATCTGGCGTATCTTCACCCGCGACTCTTCACCACATTGTT
ACTGATTGACCCTGTAATCCAATTGACACCCCCGCCCATGGGGTTCGGCA
CCGACGCTACCGGGGCGATCAACTATACCCTTTATCGCAAGGATGTCTGG
CCCAGCCGCGAGGTGGCTCTCCGTGCCAATCGCGCTTTGACTCATGGCTG
GGACCCCCGCTGCGTGGCTCGCATGGCGCAATACGGGTTCCGCGATCTGC
CCACCGCGCTGTATCCGGACGTGGATGCAGTGAAGGCGAAATTTCAAAGC
ACTACATCATCTACTTCTCAGCCTCCAGCACAATCACACGATGCCACGAC
CAACAATACAACCCCAGTGACTCTTACAACCACCAAGTATCACGACCTCC
TCGCCCAGATCCGCGAGAACTTCAGCGCCCGGTCCCCGGAGACGGGCCGG
ATCTCCATCCCACGGGCCACCCACGCGGATCTCGACCCGCTCGCCGCGTT
TATCCCGATGTATCGCCCCGAGCCCCGGAGCGTCTTCCTTCGGCTGCCAA
CTCTACGACCATCGTGTCTGTGGGTGCTGGGGGGTGCAACCTTTCTCAAG
CTTGACGAGATGCGCGAGGGGATCAAGACCTGCGGCACCGGGTTGGGAGG
GAGTGGGGGCATCCCCGATGGGAGGGTCCGGGAGGTGACGCTAGCAGGGC
TGGGCCATCTGATGCCGTTTCAGGCGGTTCAACAGGTTGCAGAGCCCTGT
GTGGCGTGGCTGGAGTCGGAGATGACACGTTTTCGCGAGGCTGAGAGGCT
ATGGGCGGAGGAGCAAAAGGGACGCAGTCATCTCACCTTAGAGGAGACGT
GGTATCGAGTTTTGAAGCCTGTAACCGTTACAGGTGGGAAAGGGAAAGCC
CGGAAAGCCAGGAAGGACAAGCTGTAAATGTCCAGCGAAAATTTCACTAT
AACCGAGCATGTCGTCCCGGGTTGTCACATTCGAGAGTATCCCGGAAGCA
CCGTCAATCAGGAGGATGTTTTGCACCTACATGTTAAACAGTACACCCCC
AGAAACCAAGCCCAGCCAGTGCCGAAAGATGCCGTCACAATCATTGCCGC
TCATGGAGCAGCTCTGCCCAAGGAATTGTACGAACCGCTGTGGGACACAC
TGTTGGAGCAGGCCAACAATTTTCAGATCCGTAGCATATGGGTCGCCGAT
TGCGCCAGTATGAACATAAGCGGAATTCTAAATGAAGACAAACTCAGCAT
GGACTGTTCCTGGATGGATCATTCTCGGGATCTCTTCCTAATGATCAACC
AGTTTCGAGAGCAAATGCCTCGTCCGATCGTAGGAGTCGGACACAGCTTT
GGTGGAAATATCATTACCAATCTGGCGTATCTTCACCCGCGACTCTTCAC
CACATTGTTACTGATTGACCCTGTAATCCAATTGACACCCCCGCCCATGG
GGTTCGGCACCGACGCTACCGGGGCGATCAACTATACCCTTTATCGCAAG
GATGTCTGGCCCAGCCGCGAGGTGGCTCTCCGTGCCAATCGCGCTTTGAC
TCATGGCTGGGACCCCCGCTGCGTGGCTCGCATGGCGCAATACGGGTTCC
GCGATCTGCCCACCGCGCTGTATCCGGACGTGGATGCAGTGAAGGCGAAA
TTTCAAAGCACTACATCATCTACTTCTCAGCCTCCAGCACAATCACACGA
TGCCACGACCAACAATACAACCCCAGTGACTCTTACAACCACCAAGTATC
ACGACCTCCTCGCCCAGATCCGCGAGAACTTCAGCGCCCGGTCCCCGGAG
ACGGGCCGGATCTCCATCCCACGGGCCACCCACGCGGATCTCGACCCGCT
CGCCGCGTTTATCCCGATGTATCGCCCCGAGCCCCGGAGCGTCTTCCTTC
GGCTGCCAACTCTACGACCATCGTGTCTGTGGGTGCTGGGGGGTGCAACC
TTTCTCAAGCTTGACGAGATGCGCGAGGGGATCAAGACCTGCGGCACCGG
GTTGGGAGGGAGTGGGGGCATCCCCGATGGGAGGGTCCGGGAGGTGACGC
TAGCAGGGCTGGGCCATCTGATGCCGTTTCAGGCGGTTCAACAGGTTGCA
GAGCCCTGTGTGGCGTGGCTGGAGTCGGAGATGACACGTTTTCGCGAGGC
TGAGAGGCTATGGGCGGAGGAGCAAAAGGGACGCAGTCATCTCACCTTAG
AGGAGACGTGGTATCGAGTTTTGAAGCCTGTAACCGTTACAGGTGGGAAA
GGGAAAGCCCGGAAAGCCAGGAAGGACAAGCTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002579-T1.utr5p1 | KJC3_002579-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002579-T1.utr3p1 | KJC3_002579-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.14 |
| Note | MEROPS:MER0209971 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2975199..2976842 + |
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