KJC3_002673-T1, KJC3_002673-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_002673-T1
Unique Name	KJC3_002673-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch2:3236842..3238284-
coding sequence from alignment at ch2:3236842..3238284-

mRNA from alignment at ch2:3236842..3238284-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_002673-T1 ID=KJC3_002673-T1|Name=KJC3_002673-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1443bp|location=Sequence derived from alignment at ch2:3236842..3238284- (Aspergillus niger KJC3)
GCCATCTTTCTTTCTGTTTCCTCCCCCTCCTCCCTTCATGTTTTCGCTTC
CCGCTTTTCGCTCGTCTTTCCTCAGGGTCCTCGTCCCAAGATTCTCCATC
GTCCCTGGTACGTGCCATCATCAATCCCAGAGAATAGCTTTCCCCACTCG
GGTCGATTCCAGAAGCTTACCACGGGATAGGAACCAATCGATCCCTCGCA
ACCATGGCGACAGACACTTCCAAGTATAAGCTTAACCGTTAGTGGCTTCC
ATTGCCCTGATCATCAGTCTGGCCTGGATCTAATAATGTGACTGTACGAC
AGACACCATGCTTCGGGTCAAGGACCCGAAGAAGTCTTGTATGTTCCCCT
TTCAAAGCAGCCCCCCGAGGTGGCTCATGTACTCATCTGTCATTCTCCTC
GCTTAGTGGAATTCTACAAGTACCTGGGTCTCAGCCAGGTCAACCAGATC
GACTTCCCCGAGAACAAGTTCTCCCTCTACTTCCTTGCCTACGACGGCCC
CCAGTCTCTCCAGGGTGAACGTCACTTCACGGACCGCAACGGCGTCTTGG
AGCTCACCCATAACCATGGCACGGAGGATGACCCTAACTACAGCGTGGTC
AACGGTAACACCGAACCCTACCGCGGTTTTGGACACATTGCTATTTCCGT
GGACAACATCGAGGCCGCCTGCAAGCGACTGGAGGATGCCGGATACCCCT
TCCAGAAGAAGCTTACCGAGGGCCGTATGCGTCACATCGCGTTTGTCAAG
GATCCCGATGGATACTGGGTCGAGATTATCCGCCGTCACAACGAGGATGT
TGGTACCGCCACCGATCCCTCCAGCTACCGTCTGAACCACACCATGCTCC
GCGTCAAATGCGCCGAGACTAGCGTCAAGTATTACCAGGAAGTCTTTGGA
ATGACTCTGTTGCGCACCATCGAGAACAAGGATGCTGGATTCAACCTTTA
CTTCCTGGGCTACCCTGGTGCCAACCCTGAGCGGCGCGAGGGTGCCACCA
ACCCGGTCTCTGAATGGGAGGGTCTGCTGGAGCTTACCTGGAACTATGGC
ACCGAGAAGCAAGAGGGCCCGGTTTATCACAACGGTAACACGGAGCCGCA
AGGATTTGGACACATTTGTAAGTCATATTCTTTGATGAGCCGGCTCAACG
AGTTGGCTTTTCGTAGAACATAGGAAGGATCGCTAACAACCGTCGGTGGT
TACAGGTGTCTCCGTCGACGATCTCAATGCTGCCTGTGATCGGTTCGAGT
CTCTGAATGTTAACTGGAAGAAGCGCCTTACGGATGGACGGATGAAGTAC
GTGGCATTCATCCTGGATCCGGATAACTATTGGGTGGAGGTTGTCCAGAA
CGAGGCACTTAAGCGTACTGGCAACTTGTAATGGAGGGATTGTGTATATA
GCTGACCTGCCCCACATATACTGATGGTTCTTGCACTGTTGTA

Coding sequence (CDS) from alignment at ch2:3236842..3238284-

>KJC3_002673-T1 ID=KJC3_002673-T1|Name=KJC3_002673-T1|organism=Aspergillus niger KJC3|type=CDS|length=5250bp|location=Sequence derived from alignment at ch2:3236842..3238284- (Aspergillus niger KJC3)
GTGTCTCCGTCGACGATCTCAATGCTGCCTGTGATCGGTTCGAGTCTCTG
AATGTTAACTGGAAGAAGCGCCTTACGGATGGACGGATGAAGTACGTGGC
ATTCATCCTGGATCCGGATAACTATTGGGTGGAGGTTGTCCAGAACGAGG
CACTTAAGCGTACTGGCAACTTGTAATGGAATTCTACAAGTACCTGGGTC
TCAGCCAGGTCAACCAGATCGACTTCCCCGAGAACAAGTTCTCCCTCTAC
TTCCTTGCCTACGACGGCCCCCAGTCTCTCCAGGGTGAACGTCACTTCAC
GGACCGCAACGGCGTCTTGGAGCTCACCCATAACCATGGCACGGAGGATG
ACCCTAACTACAGCGTGGTCAACGGTAACACCGAACCCTACCGCGGTTTT
GGACACATTGCTATTTCCGTGGACAACATCGAGGCCGCCTGCAAGCGACT
GGAGGATGCCGGATACCCCTTCCAGAAGAAGCTTACCGAGGGCCGTATGC
GTCACATCGCGTTTGTCAAGGATCCCGATGGATACTGGGTCGAGATTATC
CGCCGTCACAACGAGGATGTTGGTACCGCCACCGATCCCTCCAGCTACCG
TCTGAACCACACCATGCTCCGCGTCAAATGCGCCGAGACTAGCGTCAAGT
ATTACCAGGAAGTCTTTGGAATGACTCTGTTGCGCACCATCGAGAACAAG
GATGCTGGATTCAACCTTTACTTCCTGGGCTACCCTGGTGCCAACCCTGA
GCGGCGCGAGGGTGCCACCAACCCGGTCTCTGAATGGGAGGGTCTGCTGG
AGCTTACCTGGAACTATGGCACCGAGAAGCAAGAGGGCCCGGTTTATCAC
AACGGTAACACGGAGCCGCAAGGATTTGGACACATTTACACCATGCTTCG
GGTCAAGGACCCGAAGAAGTCTTGAACCAATCGATCCCTCGCAACCATGG
CGACAGACACTTCCAAGTATAAGCTTAACCATGTTTTCGCTTCCCGCTTT
TCGCTCGTCTTTCCTCAGGGTCCTCGTCCCAAGATTCTCCATCGTCCCTG
GTGTCTCCGTCGACGATCTCAATGCTGCCTGTGATCGGTTCGAGTCTCTG
AATGTTAACTGGAAGAAGCGCCTTACGGATGGACGGATGAAGTACGTGGC
ATTCATCCTGGATCCGGATAACTATTGGGTGGAGGTTGTCCAGAACGAGG
CACTTAAGCGTACTGGCAACTTGTAATGGAATTCTACAAGTACCTGGGTC
TCAGCCAGGTCAACCAGATCGACTTCCCCGAGAACAAGTTCTCCCTCTAC
TTCCTTGCCTACGACGGCCCCCAGTCTCTCCAGGGTGAACGTCACTTCAC
GGACCGCAACGGCGTCTTGGAGCTCACCCATAACCATGGCACGGAGGATG
ACCCTAACTACAGCGTGGTCAACGGTAACACCGAACCCTACCGCGGTTTT
GGACACATTGCTATTTCCGTGGACAACATCGAGGCCGCCTGCAAGCGACT
GGAGGATGCCGGATACCCCTTCCAGAAGAAGCTTACCGAGGGCCGTATGC
GTCACATCGCGTTTGTCAAGGATCCCGATGGATACTGGGTCGAGATTATC
CGCCGTCACAACGAGGATGTTGGTACCGCCACCGATCCCTCCAGCTACCG
TCTGAACCACACCATGCTCCGCGTCAAATGCGCCGAGACTAGCGTCAAGT
ATTACCAGGAAGTCTTTGGAATGACTCTGTTGCGCACCATCGAGAACAAG
GATGCTGGATTCAACCTTTACTTCCTGGGCTACCCTGGTGCCAACCCTGA
GCGGCGCGAGGGTGCCACCAACCCGGTCTCTGAATGGGAGGGTCTGCTGG
AGCTTACCTGGAACTATGGCACCGAGAAGCAAGAGGGCCCGGTTTATCAC
AACGGTAACACGGAGCCGCAAGGATTTGGACACATTTACACCATGCTTCG
GGTCAAGGACCCGAAGAAGTCTTGAACCAATCGATCCCTCGCAACCATGG
CGACAGACACTTCCAAGTATAAGCTTAACCATGTTTTCGCTTCCCGCTTT
TCGCTCGTCTTTCCTCAGGGTCCTCGTCCCAAGATTCTCCATCGTCCCTG
GTGTCTCCGTCGACGATCTCAATGCTGCCTGTGATCGGTTCGAGTCTCTG
AATGTTAACTGGAAGAAGCGCCTTACGGATGGACGGATGAAGTACGTGGC
ATTCATCCTGGATCCGGATAACTATTGGGTGGAGGTTGTCCAGAACGAGG
CACTTAAGCGTACTGGCAACTTGTAATGGAATTCTACAAGTACCTGGGTC
TCAGCCAGGTCAACCAGATCGACTTCCCCGAGAACAAGTTCTCCCTCTAC
TTCCTTGCCTACGACGGCCCCCAGTCTCTCCAGGGTGAACGTCACTTCAC
GGACCGCAACGGCGTCTTGGAGCTCACCCATAACCATGGCACGGAGGATG
ACCCTAACTACAGCGTGGTCAACGGTAACACCGAACCCTACCGCGGTTTT
GGACACATTGCTATTTCCGTGGACAACATCGAGGCCGCCTGCAAGCGACT
GGAGGATGCCGGATACCCCTTCCAGAAGAAGCTTACCGAGGGCCGTATGC
GTCACATCGCGTTTGTCAAGGATCCCGATGGATACTGGGTCGAGATTATC
CGCCGTCACAACGAGGATGTTGGTACCGCCACCGATCCCTCCAGCTACCG
TCTGAACCACACCATGCTCCGCGTCAAATGCGCCGAGACTAGCGTCAAGT
ATTACCAGGAAGTCTTTGGAATGACTCTGTTGCGCACCATCGAGAACAAG
GATGCTGGATTCAACCTTTACTTCCTGGGCTACCCTGGTGCCAACCCTGA
GCGGCGCGAGGGTGCCACCAACCCGGTCTCTGAATGGGAGGGTCTGCTGG
AGCTTACCTGGAACTATGGCACCGAGAAGCAAGAGGGCCCGGTTTATCAC
AACGGTAACACGGAGCCGCAAGGATTTGGACACATTTACACCATGCTTCG
GGTCAAGGACCCGAAGAAGTCTTGAACCAATCGATCCCTCGCAACCATGG
CGACAGACACTTCCAAGTATAAGCTTAACCATGTTTTCGCTTCCCGCTTT
TCGCTCGTCTTTCCTCAGGGTCCTCGTCCCAAGATTCTCCATCGTCCCTG
GTGTCTCCGTCGACGATCTCAATGCTGCCTGTGATCGGTTCGAGTCTCTG
AATGTTAACTGGAAGAAGCGCCTTACGGATGGACGGATGAAGTACGTGGC
ATTCATCCTGGATCCGGATAACTATTGGGTGGAGGTTGTCCAGAACGAGG
CACTTAAGCGTACTGGCAACTTGTAATGGAATTCTACAAGTACCTGGGTC
TCAGCCAGGTCAACCAGATCGACTTCCCCGAGAACAAGTTCTCCCTCTAC
TTCCTTGCCTACGACGGCCCCCAGTCTCTCCAGGGTGAACGTCACTTCAC
GGACCGCAACGGCGTCTTGGAGCTCACCCATAACCATGGCACGGAGGATG
ACCCTAACTACAGCGTGGTCAACGGTAACACCGAACCCTACCGCGGTTTT
GGACACATTGCTATTTCCGTGGACAACATCGAGGCCGCCTGCAAGCGACT
GGAGGATGCCGGATACCCCTTCCAGAAGAAGCTTACCGAGGGCCGTATGC
GTCACATCGCGTTTGTCAAGGATCCCGATGGATACTGGGTCGAGATTATC
CGCCGTCACAACGAGGATGTTGGTACCGCCACCGATCCCTCCAGCTACCG
TCTGAACCACACCATGCTCCGCGTCAAATGCGCCGAGACTAGCGTCAAGT
ATTACCAGGAAGTCTTTGGAATGACTCTGTTGCGCACCATCGAGAACAAG
GATGCTGGATTCAACCTTTACTTCCTGGGCTACCCTGGTGCCAACCCTGA
GCGGCGCGAGGGTGCCACCAACCCGGTCTCTGAATGGGAGGGTCTGCTGG
AGCTTACCTGGAACTATGGCACCGAGAAGCAAGAGGGCCCGGTTTATCAC
AACGGTAACACGGAGCCGCAAGGATTTGGACACATTTACACCATGCTTCG
GGTCAAGGACCCGAAGAAGTCTTGAACCAATCGATCCCTCGCAACCATGG
CGACAGACACTTCCAAGTATAAGCTTAACCATGTTTTCGCTTCCCGCTTT
TCGCTCGTCTTTCCTCAGGGTCCTCGTCCCAAGATTCTCCATCGTCCCTG
GTGTCTCCGTCGACGATCTCAATGCTGCCTGTGATCGGTTCGAGTCTCTG
AATGTTAACTGGAAGAAGCGCCTTACGGATGGACGGATGAAGTACGTGGC
ATTCATCCTGGATCCGGATAACTATTGGGTGGAGGTTGTCCAGAACGAGG
CACTTAAGCGTACTGGCAACTTGTAATGGAATTCTACAAGTACCTGGGTC
TCAGCCAGGTCAACCAGATCGACTTCCCCGAGAACAAGTTCTCCCTCTAC
TTCCTTGCCTACGACGGCCCCCAGTCTCTCCAGGGTGAACGTCACTTCAC
GGACCGCAACGGCGTCTTGGAGCTCACCCATAACCATGGCACGGAGGATG
ACCCTAACTACAGCGTGGTCAACGGTAACACCGAACCCTACCGCGGTTTT
GGACACATTGCTATTTCCGTGGACAACATCGAGGCCGCCTGCAAGCGACT
GGAGGATGCCGGATACCCCTTCCAGAAGAAGCTTACCGAGGGCCGTATGC
GTCACATCGCGTTTGTCAAGGATCCCGATGGATACTGGGTCGAGATTATC
CGCCGTCACAACGAGGATGTTGGTACCGCCACCGATCCCTCCAGCTACCG
TCTGAACCACACCATGCTCCGCGTCAAATGCGCCGAGACTAGCGTCAAGT
ATTACCAGGAAGTCTTTGGAATGACTCTGTTGCGCACCATCGAGAACAAG
GATGCTGGATTCAACCTTTACTTCCTGGGCTACCCTGGTGCCAACCCTGA
GCGGCGCGAGGGTGCCACCAACCCGGTCTCTGAATGGGAGGGTCTGCTGG
AGCTTACCTGGAACTATGGCACCGAGAAGCAAGAGGGCCCGGTTTATCAC
AACGGTAACACGGAGCCGCAAGGATTTGGACACATTTACACCATGCTTCG
GGTCAAGGACCCGAAGAAGTCTTGAACCAATCGATCCCTCGCAACCATGG
CGACAGACACTTCCAAGTATAAGCTTAACCATGTTTTCGCTTCCCGCTTT
TCGCTCGTCTTTCCTCAGGGTCCTCGTCCCAAGATTCTCCATCGTCCCTG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004462	lactoylglutathione lyase activity
GO:0046872	metal ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_002673	KJC3_002673	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002673-T1	KJC3_002673-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002673-T1.cds	KJC3_002673-T1.cds	Aspergillus niger KJC3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002673-T1.utr3p1	KJC3_002673-T1.utr3p1	Aspergillus niger KJC3	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002673-T1.exon5	KJC3_002673-T1.exon5	Aspergillus niger KJC3	exon
KJC3_002673-T1.exon4	KJC3_002673-T1.exon4	Aspergillus niger KJC3	exon
KJC3_002673-T1.exon3	KJC3_002673-T1.exon3	Aspergillus niger KJC3	exon
KJC3_002673-T1.exon2	KJC3_002673-T1.exon2	Aspergillus niger KJC3	exon
KJC3_002673-T1.exon1	KJC3_002673-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_002673-T1.utr5p1	KJC3_002673-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR037523
DBxref	InterPro:IPR018146
DBxref	InterPro:IPR004360
DBxref	InterPro:IPR029068
DBxref	InterPro:IPR004361
DBxref	PFAM:PF00903
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch2	supercontig	ch2:3236842..3238284 -

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KJC3_002673-T1, KJC3_002673-T1 (mRNA) Aspergillus niger KJC3