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KJC3_002682-T1, KJC3_002682-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002682-T1
Unique NameKJC3_002682-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3272531..3273498-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002682-T1 ID=KJC3_002682-T1|Name=KJC3_002682-T1|organism=Aspergillus niger KJC3|type=mRNA|length=968bp|location=Sequence derived from alignment at ch2:3272531..3273498- (Aspergillus niger KJC3)
ATGCGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCGCCGTTACAGC
GCTGGGTACGTGTTCCCTTGATTCTGGATCATCTGCTCTGGACTAACATC
AGCATGTCTAGCCATCACCATCACCCAGCCTCAAAATGGCGACCAGGTGG
ACTTCAGCAAGCCCTACACCATTAAGTGGACGACTGTGGCGTAAGTGAAC
ACGGGCTCATTGACGGTTACACACAACTAAATCATGTCTTCGGATCAGAT
CTGACCCTTCGAACTTCACCATCATGCTGGTCAACATGAACAGCCAGCCC
ACCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGATAGCAAATACAC
CGTTGACAAGGTCGTCGGAATTCCGGTTGCGTATGTATCTTCAAGCGGCC
CAGCCGCCTTGTTATGGCATATGTCGTACGACCCTAACAAATGCGCATAG
TAATGGCTACCAACTCAACGCCGAATCCAATACCACCCATAACACCGGCA
TCCTGAGCCAGTCGCAGCAGTTCAATGTGACCAAGGTTGGCAAGGCTGAA
ACAAGTAAGGAAAATTCTATTTTATCATCATCATCATCATCATCATCATC
ATCATCATCATCACAATTATCATCATCTTCACCATCACCATCACCATGTA
TCCGCCCACGTACCAGCACCACCATCACAAAAACCACTTCCCGCCCCTGC
ATCAACCACCAGACTACTTCACCACCATCTAGCACCACTCCCTCCGCCTC
CAAAACACCGGGTGAGTACGTACAGGATGTGAAGTAGACGGGTCTCTAAC
CGTGTTCTCTTTGCCTTACCTACAGCTTCAGCCACCACCAGCGCCACCCA
CACAGCTGCTGCGTCTACCTCCTCATCTGCCGGATCTGCCGCGTACACGG
GCACGCTTCCTGGCTCCGCCGCCGTGATCGGTGCGCTCGCAATGGGCGTA
ATTGCCGAGATTCTGTAA
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Coding sequence (CDS) from alignment at ch2:3272531..3273498-

>KJC3_002682-T1 ID=KJC3_002682-T1|Name=KJC3_002682-T1|organism=Aspergillus niger KJC3|type=CDS|length=2565bp|location=Sequence derived from alignment at ch2:3272531..3273498- (Aspergillus niger KJC3)
CTTCAGCCACCACCAGCGCCACCCACACAGCTGCTGCGTCTACCTCCTCA
TCTGCCGGATCTGCCGCGTACACGGGCACGCTTCCTGGCTCCGCCGCCGT
GATCGGTGCGCTCGCAATGGGCGTAATTGCCGAGATTCTGTAATAATGGC
TACCAACTCAACGCCGAATCCAATACCACCCATAACACCGGCATCCTGAG
CCAGTCGCAGCAGTTCAATGTGACCAAGGTTGGCAAGGCTGAAACAAATC
TGACCCTTCGAACTTCACCATCATGCTGGTCAACATGAACAGCCAGCCCA
CCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGATAGCAAATACACC
GTTGACAAGGTCGTCGGAATTCCGGTTGCCCATCACCATCACCCAGCCTC
AAAATGGCGACCAGGTGGACTTCAGCAAGCCCTACACCATTAAGTGGACG
ACTGTGGCATGCGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCGCC
GTTACAGCGCTGGCTTCAGCCACCACCAGCGCCACCCACACAGCTGCTGC
GTCTACCTCCTCATCTGCCGGATCTGCCGCGTACACGGGCACGCTTCCTG
GCTCCGCCGCCGTGATCGGTGCGCTCGCAATGGGCGTAATTGCCGAGATT
CTGTAATAATGGCTACCAACTCAACGCCGAATCCAATACCACCCATAACA
CCGGCATCCTGAGCCAGTCGCAGCAGTTCAATGTGACCAAGGTTGGCAAG
GCTGAAACAAATCTGACCCTTCGAACTTCACCATCATGCTGGTCAACATG
AACAGCCAGCCCACCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGA
TAGCAAATACACCGTTGACAAGGTCGTCGGAATTCCGGTTGCCCATCACC
ATCACCCAGCCTCAAAATGGCGACCAGGTGGACTTCAGCAAGCCCTACAC
CATTAAGTGGACGACTGTGGCATGCGTTTCTTGAACATTGTTATCTCGAT
GATGGCGTTCGCCGTTACAGCGCTGGCTTCAGCCACCACCAGCGCCACCC
ACACAGCTGCTGCGTCTACCTCCTCATCTGCCGGATCTGCCGCGTACACG
GGCACGCTTCCTGGCTCCGCCGCCGTGATCGGTGCGCTCGCAATGGGCGT
AATTGCCGAGATTCTGTAATAATGGCTACCAACTCAACGCCGAATCCAAT
ACCACCCATAACACCGGCATCCTGAGCCAGTCGCAGCAGTTCAATGTGAC
CAAGGTTGGCAAGGCTGAAACAAATCTGACCCTTCGAACTTCACCATCAT
GCTGGTCAACATGAACAGCCAGCCCACCGTCAGCAAAAAGATCGCCAATG
TCAAGACATCGGATAGCAAATACACCGTTGACAAGGTCGTCGGAATTCCG
GTTGCCCATCACCATCACCCAGCCTCAAAATGGCGACCAGGTGGACTTCA
GCAAGCCCTACACCATTAAGTGGACGACTGTGGCATGCGTTTCTTGAACA
TTGTTATCTCGATGATGGCGTTCGCCGTTACAGCGCTGGCTTCAGCCACC
ACCAGCGCCACCCACACAGCTGCTGCGTCTACCTCCTCATCTGCCGGATC
TGCCGCGTACACGGGCACGCTTCCTGGCTCCGCCGCCGTGATCGGTGCGC
TCGCAATGGGCGTAATTGCCGAGATTCTGTAATAATGGCTACCAACTCAA
CGCCGAATCCAATACCACCCATAACACCGGCATCCTGAGCCAGTCGCAGC
AGTTCAATGTGACCAAGGTTGGCAAGGCTGAAACAAATCTGACCCTTCGA
ACTTCACCATCATGCTGGTCAACATGAACAGCCAGCCCACCGTCAGCAAA
AAGATCGCCAATGTCAAGACATCGGATAGCAAATACACCGTTGACAAGGT
CGTCGGAATTCCGGTTGCCCATCACCATCACCCAGCCTCAAAATGGCGAC
CAGGTGGACTTCAGCAAGCCCTACACCATTAAGTGGACGACTGTGGCATG
CGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCGCCGTTACAGCGCT
GGCTTCAGCCACCACCAGCGCCACCCACACAGCTGCTGCGTCTACCTCCT
CATCTGCCGGATCTGCCGCGTACACGGGCACGCTTCCTGGCTCCGCCGCC
GTGATCGGTGCGCTCGCAATGGGCGTAATTGCCGAGATTCTGTAATAATG
GCTACCAACTCAACGCCGAATCCAATACCACCCATAACACCGGCATCCTG
AGCCAGTCGCAGCAGTTCAATGTGACCAAGGTTGGCAAGGCTGAAACAAA
TCTGACCCTTCGAACTTCACCATCATGCTGGTCAACATGAACAGCCAGCC
CACCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGATAGCAAATACA
CCGTTGACAAGGTCGTCGGAATTCCGGTTGCCCATCACCATCACCCAGCC
TCAAAATGGCGACCAGGTGGACTTCAGCAAGCCCTACACCATTAAGTGGA
CGACTGTGGCATGCGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCG
CCGTTACAGCGCTGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002682KJC3_002682Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002682-T1KJC3_002682-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002682-T1.cdsKJC3_002682-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002682-T1.exon5KJC3_002682-T1.exon5Aspergillus niger KJC3exon
KJC3_002682-T1.exon4KJC3_002682-T1.exon4Aspergillus niger KJC3exon
KJC3_002682-T1.exon3KJC3_002682-T1.exon3Aspergillus niger KJC3exon
KJC3_002682-T1.exon2KJC3_002682-T1.exon2Aspergillus niger KJC3exon
KJC3_002682-T1.exon1KJC3_002682-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
DBxrefInterPro:IPR018466
DBxrefPFAM:PF10342
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3272531..3273498 -
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