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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3303754..3304859- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002689-T1 ID=KJC3_002689-T1|Name=KJC3_002689-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1106bp|location=Sequence derived from alignment at ch2:3303754..3304859- (Aspergillus niger KJC3)
GGAGTTTCCGTCCGGATGACGTAAAAAGCCCAAGCAAATCAAAGCTTCAG
CGGCGACCTTCAATCAAAGCGACTAACTAACCTTCCTTCACTATTCTTCC
TTGAGACTCTCTTGTTGTCAGTGACTAACTGTCATACCTATCTGCTATCT
CCCACTAATTCGTTCCATATCAATTCACACCCCGATGCGCTTCCAGGGCC
TGATCCCCGCCCTCCGCACCATCACACTACCCCTCCGATCGCACTCCGTC
CGAGCCCTCCAGCGACCTCCTCTCCCCATCCCCAGCGCAACTGTCCTCAA
AGCCGGTCCCACGATCCCCTTCCTAGGCGCATTATTCGGATCTAGCGCGA
AATCCGACTCCCAGTCTAACAACATGTCCTATCCCGACCAGCGCAGTGAT
GATGCATGGCAAGCCGTGCTAAGTCCTGGTATGTATGCCTTTATTCTCAT
TTTCTACCTACTTGCCCCTCATCTGCTCCACGGTGTTAGCTTTCTATTGG
TATGAAAAGAACTAACCAAAGTCAATAAAAGAGCAATTCCGAATCCTCCG
CCAAAAGGGCACGGAGCGACCCTTCACGGGCGAATACGATTCCCACTACC
CTTCCCAGGGAGTCTATAACTGCGCGGGATGCAACGCGCCGTTGTACAAG
GCAACACATAAATTCAAGTCAGGATGTGGATGGCCTGCGTACTTTGATTC
CATCCCCGGAGCGGTTACAAGACATACGGATCGGTCGTTCGGAATGGAAC
GGACGGAGATTGTGTGTAGCAACTGTGGGGGACATTTGGGACATGTGTTT
AAGGGAGAGGGATATTCGACTCCCACGGATGAGAGGCATTGTGTGAATAG
TGTTAGTTTGCGGTTTAAGGAGGATGAAGGTCAGGGGAACTAAAAGGGGT
GGGAAGGTAAATGGGGAAGTTTCGGTGTAGAGTACTGTAGTTGTATGACG
AAGAGATGAAGAAATGAGAAGAAGATGAAGAAGATGAAGATCGTCGCTGT
TTGTCTGCGACGCTGGTAAAACTCATACAATCAATCAAAGGCAATCAATC
TAGATCAAACGGCATCGCTGGCACGTGCCGCTGGCCGGTCGGAGGTCAAC
CCACCG back to topCoding sequence (CDS) from alignment at ch2:3303754..3304859- >KJC3_002689-T1 ID=KJC3_002689-T1|Name=KJC3_002689-T1|organism=Aspergillus niger KJC3|type=CDS|length=1212bp|location=Sequence derived from alignment at ch2:3303754..3304859- (Aspergillus niger KJC3)
AGCAATTCCGAATCCTCCGCCAAAAGGGCACGGAGCGACCCTTCACGGGC
GAATACGATTCCCACTACCCTTCCCAGGGAGTCTATAACTGCGCGGGATG
CAACGCGCCGTTGTACAAGGCAACACATAAATTCAAGTCAGGATGTGGAT
GGCCTGCGTACTTTGATTCCATCCCCGGAGCGGTTACAAGACATACGGAT
CGGTCGTTCGGAATGGAACGGACGGAGATTGTGTGTAGCAACTGTGGGGG
ACATTTGGGACATGTGTTTAAGGGAGAGGGATATTCGACTCCCACGGATG
AGAGGCATTGTGTGAATAGTGTTAGTTTGCGGTTTAAGGAGGATGAAGGT
CAGGGGAACTAAATGCGCTTCCAGGGCCTGATCCCCGCCCTCCGCACCAT
CACACTACCCCTCCGATCGCACTCCGTCCGAGCCCTCCAGCGACCTCCTC
TCCCCATCCCCAGCGCAACTGTCCTCAAAGCCGGTCCCACGATCCCCTTC
CTAGGCGCATTATTCGGATCTAGCGCGAAATCCGACTCCCAGTCTAACAA
CATGTCCTATCCCGACCAGCGCAGTGATGATGCATGGCAAGCCGTGCTAA
GTCCTGAGCAATTCCGAATCCTCCGCCAAAAGGGCACGGAGCGACCCTTC
ACGGGCGAATACGATTCCCACTACCCTTCCCAGGGAGTCTATAACTGCGC
GGGATGCAACGCGCCGTTGTACAAGGCAACACATAAATTCAAGTCAGGAT
GTGGATGGCCTGCGTACTTTGATTCCATCCCCGGAGCGGTTACAAGACAT
ACGGATCGGTCGTTCGGAATGGAACGGACGGAGATTGTGTGTAGCAACTG
TGGGGGACATTTGGGACATGTGTTTAAGGGAGAGGGATATTCGACTCCCA
CGGATGAGAGGCATTGTGTGAATAGTGTTAGTTTGCGGTTTAAGGAGGAT
GAAGGTCAGGGGAACTAAATGCGCTTCCAGGGCCTGATCCCCGCCCTCCG
CACCATCACACTACCCCTCCGATCGCACTCCGTCCGAGCCCTCCAGCGAC
CTCCTCTCCCCATCCCCAGCGCAACTGTCCTCAAAGCCGGTCCCACGATC
CCCTTCCTAGGCGCATTATTCGGATCTAGCGCGAAATCCGACTCCCAGTC
TAACAACATGTCCTATCCCGACCAGCGCAGTGATGATGCATGGCAAGCCG
TGCTAAGTCCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0033743 | peptide-methionine (R)-S-oxide reductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002689-T1.utr3p1 | KJC3_002689-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002689-T1.utr5p1 | KJC3_002689-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264NEF |
| DBxref | InterPro:IPR011057 |
| DBxref | InterPro:IPR002579 |
| DBxref | PFAM:PF01641 |
| Product | Peptide methionine sulfoxide reductase B3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3303754..3304859 - |
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