|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3377206..3378024+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002718-T1 ID=KJC3_002718-T1|Name=KJC3_002718-T1|organism=Aspergillus niger KJC3|type=mRNA|length=819bp|location=Sequence derived from alignment at ch2:3377206..3378024+ (Aspergillus niger KJC3)
ATGTCCACCTACGAAGGTAGTTATCCCACCCTTCCCCTTCCCCAAACCTT
CCCATCACAAAACTAATAAATGAATATAATAAAACAGTGGAACACAACAC
CACCGACCCCTCCACCACAACACCCAACAACAGCACAACCCCCGACCAGC
ACCACCGCCGCCGCCGTCCCGACCTCTCCACCTTCTTCTCAGCCCTTTCC
GAAATCACCCCCGACGAAGCGCGTCATCGTCCCCATGCCGTCCCCGTTCC
TCGAGACGTCAGCGCAGCATTCTACTCCCTGGCCGAGGCATTGGACTTGA
TGCGCCGCGAAGGAGGAGGCGGGGCAGCTCTGCCCAGCGAAACACAAGGA
ACAGCAGGAGGTGATGGCGATAACGACCTCCTCACAACAATGATTCAGAG
TCTGCTAAGCACGGCTGAAATGCCTCCTAGGGAGGTGGAGGGTGCGAGTG
AGGAGTTTTGTGATCGTGCGTTGAACACCGCCCCCAAACATACATCGCAA
AGTAAATGTTCTGGCTTTTTGCTAACTGTTGTTTGGTGTAGAACTCGACC
GCATCCCCCGTACCGCGTTGAACTCCTCCCAGGTCTGTCCGATTTGCAAT
AACCCGTTCCTGGAGGATCAGTACCCACTTGTTGTGCGGCTGCCGTGTCA
TCCGACACATTTGTTTGATTTGGAGTGTGTGAGGCCGTGGTTGAGGCTGC
GGGGGACTTGTCCGCTTGATCGGACGGATTTCGCGAAGCAGGAGAGGGAG
AAGGCGGAGGCGAGGAGGAAGTTGGCGGAGGAGGATGAAGAGGAGGAGTG
GGACGGGATGTATGCTTGA back to topCoding sequence (CDS) from alignment at ch2:3377206..3378024+ >KJC3_002718-T1 ID=KJC3_002718-T1|Name=KJC3_002718-T1|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch2:3377206..3378024+ (Aspergillus niger KJC3)
ATGTCCACCTACGAAGTGGAACACAACACCACCGACCCCTCCACCACAAC
ACCCAACAACAGCACAACCCCCGACCAGCACCACCGCCGCCGCCGTCCCG
ACCTCTCCACCTTCTTCTCAGCCCTTTCCGAAATCACCCCCGACGAAGCG
CGTCATCGTCCCCATGCCGTCCCCGTTCCTCGAGACGTCAGCGCAGCATT
CTACTCCCTGGCCGAGGCATTGGACTTGATGCGCCGCGAAGGAGGAGGCG
GGGCAGCTCTGCCCAGCGAAACACAAGGAACAGCAGGAGGTGATGGCGAT
AACGACCTCCTCACAACAATGATTCAGAGTCTGCTAAGCACGGCTGAAAT
GCCTCCTAGGGAGGTGGAGGGTGCGAGTGAGGAGTTTTGTGATCAACTCG
ACCGCATCCCCCGTACCGCGTTGAACTCCTCCCAGGTCTGTCCGATTTGC
AATAACCCGTTCCTGGAGGATCAGTACCCACTTGTTGTGCGGCTGCCGTG
TCATCCGACACATTTGTTTGATTTGGAGTGTGTGAGGCCGTGGTTGAGGC
TGCGGGGGACTTGTCCGCTTGATCGGACGGATTTCGCGAAGCAGGAGAGG
GAGAAGGCGGAGGCGAGGAGGAAGTTGGCGGAGGAGGATGAAGAGGAGGA
GTGGGACGGGATGTATGCTTGAATGTCCACCTACGAAGTGGAACACAACA
CCACCGACCCCTCCACCACAACACCCAACAACAGCACAACCCCCGACCAG
CACCACCGCCGCCGCCGTCCCGACCTCTCCACCTTCTTCTCAGCCCTTTC
CGAAATCACCCCCGACGAAGCGCGTCATCGTCCCCATGCCGTCCCCGTTC
CTCGAGACGTCAGCGCAGCATTCTACTCCCTGGCCGAGGCATTGGACTTG
ATGCGCCGCGAAGGAGGAGGCGGGGCAGCTCTGCCCAGCGAAACACAAGG
AACAGCAGGAGGTGATGGCGATAACGACCTCCTCACAACAATGATTCAGA
GTCTGCTAAGCACGGCTGAAATGCCTCCTAGGGAGGTGGAGGGTGCGAGT
GAGGAGTTTTGTGATCAACTCGACCGCATCCCCCGTACCGCGTTGAACTC
CTCCCAGGTCTGTCCGATTTGCAATAACCCGTTCCTGGAGGATCAGTACC
CACTTGTTGTGCGGCTGCCGTGTCATCCGACACATTTGTTTGATTTGGAG
TGTGTGAGGCCGTGGTTGAGGCTGCGGGGGACTTGTCCGCTTGATCGGAC
GGATTTCGCGAAGCAGGAGAGGGAGAAGGCGGAGGCGAGGAGGAAGTTGG
CGGAGGAGGATGAAGAGGAGGAGTGGGACGGGATGTATGCTTGAATGTCC
ACCTACGAAGTGGAACACAACACCACCGACCCCTCCACCACAACACCCAA
CAACAGCACAACCCCCGACCAGCACCACCGCCGCCGCCGTCCCGACCTCT
CCACCTTCTTCTCAGCCCTTTCCGAAATCACCCCCGACGAAGCGCGTCAT
CGTCCCCATGCCGTCCCCGTTCCTCGAGACGTCAGCGCAGCATTCTACTC
CCTGGCCGAGGCATTGGACTTGATGCGCCGCGAAGGAGGAGGCGGGGCAG
CTCTGCCCAGCGAAACACAAGGAACAGCAGGAGGTGATGGCGATAACGAC
CTCCTCACAACAATGATTCAGAGTCTGCTAAGCACGGCTGAAATGCCTCC
TAGGGAGGTGGAGGGTGCGAGTGAGGAGTTTTGTGATCAACTCGACCGCA
TCCCCCGTACCGCGTTGAACTCCTCCCAGGTCTGTCCGATTTGCAATAAC
CCGTTCCTGGAGGATCAGTACCCACTTGTTGTGCGGCTGCCGTGTCATCC
GACACATTTGTTTGATTTGGAGTGTGTGAGGCCGTGGTTGAGGCTGCGGG
GGACTTGTCCGCTTGATCGGACGGATTTCGCGAAGCAGGAGAGGGAGAAG
GCGGAGGCGAGGAGGAAGTTGGCGGAGGAGGATGAAGAGGAGGAGTGGGA
CGGGATGTATGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001841 |
| DBxref | InterPro:IPR013083 |
| DBxref | PFAM:PF13639 |
| DBxref | PFAM:PF12861 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3377206..3378024 + |
|
