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KJC3_002859-T1, KJC3_002859-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002859-T1
Unique NameKJC3_002859-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3774723..3776487-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002859-T1 ID=KJC3_002859-T1|Name=KJC3_002859-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1765bp|location=Sequence derived from alignment at ch2:3774723..3776487- (Aspergillus niger KJC3)
GCCGGAACGAAGAAACCAGCACATCTACGTACTCTTTCTACATTAACACA
ACTGTGAACCCACTCACCCAACAACGAAACAGCAAGCGAATGCCCACTCA
CATTCAATACCAGTCTCACACTCTAACACACAAAGATGCTGGCTCAGCTT
GAAAACTCGCATTCACTGGCCCTCGTCCTGCCCAGATCCATACATACATC
GACCGCGTAATGTATACTTGCTCACAACAACACATCTTCCATTACGGACT
CTTCGTTCTCTCGGCGTTATCACACCATACGCGTTCTCACAACAGAAGTT
CAAAGATACGATTTTCGCTATCGACAGAACAGAACGACTAATCATCTCGA
ATCCAGTAAGTGATGACAGCAGTCATTCCGGGAGTTCCTTCTCGCTCAGT
GAAGAGGAGAAAAAAAAACATAGAAAACTGACCATGTACCACAAGCAAAA
TCCACAGGCAAGATCGCTGCCGCTGGGAGCTGGGATACAATAGTAAGAGA
GACATCAAAGAAAAAGGAAGAGGATAATCAGAAACCTGACGAGAGAATCG
CAGCAACCATGGCTTCGTCGTCTGATCATCCTCATGACAGAGAAAATAAT
GACAACCATAACAAGCCCAATAGACCGGCCCTGAAGATCGACACAACCAT
CATCGCACCTACTACTACCGCCCGCGCCAGCGCCGGTACTGAGGTCCCGT
CTCCAGAGTCGTCGTCTCCTCCGCAAAGTGCCGTCAGCTCGATGTCGACT
GCATCGTCCATTCTTTCCAACTCGTCGAGAGAATTCATCCTGCAGCTCGC
TCATCCCAATGCTACTGATGGTGAACCTGACGACGGTATCGTCCTTCTGA
TGTGGCCTGTCCCTGTCTCGACTGCGGCTCCTGTGTCGTCTCCGGTTTCC
CCGGCTTTGCCGGTCAATCAGGCTGCTCCCGCTCAGGATCAGGATCATGT
CCAGGGGCTGGGTGACCAGAGTGCCCAGGTGACTGGGTACGATCAGACAA
CTATGGAGGATCTCGCAACAGCTATGGCTGAGACTGAGATCTCCTCTGTG
TCGGGCACCGATTGTGACGAGGGTAATGTCGACCATGTGGATCAGAGTAC
GTTTCCTAGAAGTAGTGGGCGTTCAGTTAGTGATAAACCATGATGCTAAT
GGGGTAATGAAGCACTCACGAACAGCGAAAGCAACAACAACGACATCGAC
CAGGATATAGCAGCTAATGACCCCTGCGACCCTGGATACGACGCCGACAC
TTCAACTAGCCTGGACGACGACTGTGACTATGAGGCCATCCAAGCCTTCT
GGGAGAACGTTGTCTGCGACGGCCATGACGATGCTGTCGAACAGGAGGAG
GGTCATGGGCATTCAACTTCGTCGTTCGTTCAGGAGTGACTGACTGAAGG
TCTCGCCCTGTCAGTCAGCTACCACCTCCCCAGTCCCGATTGGGGAGAGT
GGTAGCTGACTGACAGCGAGTTTCGCGTCTCGTGAAAAGTTGTCTCTTGT
CTGGCGTTGAAGTTTTCTTTCCTGTTGGGTCTTGAGCGTGGAGTAAAGGG
AGTTAAGGATCGAAAGAAAGAAGGAGTCTCAGAGGTCTGCTATATTCTTA
TGGAGTTTATGGAGTTGTGTTGTTTAGCAGGTCTCGGTTGGTTGGGAGAG
AAAGAAGAAAGGATGACAGGAGCTCGGGGGGATCTGCTCGTTTATGTATG
CTCGGGTTGGAGCTACTGTATGGTCGTTTACCGTCGTTTACGAGTTTCAT
GCAGTTAATGTTGTC
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Coding sequence (CDS) from alignment at ch2:3774723..3776487-

>KJC3_002859-T1 ID=KJC3_002859-T1|Name=KJC3_002859-T1|organism=Aspergillus niger KJC3|type=CDS|length=1530bp|location=Sequence derived from alignment at ch2:3774723..3776487- (Aspergillus niger KJC3)
CACTCACGAACAGCGAAAGCAACAACAACGACATCGACCAGGATATAGCA
GCTAATGACCCCTGCGACCCTGGATACGACGCCGACACTTCAACTAGCCT
GGACGACGACTGTGACTATGAGGCCATCCAAGCCTTCTGGGAGAACGTTG
TCTGCGACGGCCATGACGATGCTGTCGAACAGGAGGAGGGTCATGGGCAT
TCAACTTCGTCGTTCGTTCAGGAGTGAATGGCTTCGTCGTCTGATCATCC
TCATGACAGAGAAAATAATGACAACCATAACAAGCCCAATAGACCGGCCC
TGAAGATCGACACAACCATCATCGCACCTACTACTACCGCCCGCGCCAGC
GCCGGTACTGAGGTCCCGTCTCCAGAGTCGTCGTCTCCTCCGCAAAGTGC
CGTCAGCTCGATGTCGACTGCATCGTCCATTCTTTCCAACTCGTCGAGAG
AATTCATCCTGCAGCTCGCTCATCCCAATGCTACTGATGGTGAACCTGAC
GACGGTATCGTCCTTCTGATGTGGCCTGTCCCTGTCTCGACTGCGGCTCC
TGTGTCGTCTCCGGTTTCCCCGGCTTTGCCGGTCAATCAGGCTGCTCCCG
CTCAGGATCAGGATCATGTCCAGGGGCTGGGTGACCAGAGTGCCCAGGTG
ACTGGGTACGATCAGACAACTATGGAGGATCTCGCAACAGCTATGGCTGA
GACTGAGATCTCCTCTGTGTCGGGCACCGATTGTGACGAGGGTAATGTCG
ACCATGTGGATCAGACACTCACGAACAGCGAAAGCAACAACAACGACATC
GACCAGGATATAGCAGCTAATGACCCCTGCGACCCTGGATACGACGCCGA
CACTTCAACTAGCCTGGACGACGACTGTGACTATGAGGCCATCCAAGCCT
TCTGGGAGAACGTTGTCTGCGACGGCCATGACGATGCTGTCGAACAGGAG
GAGGGTCATGGGCATTCAACTTCGTCGTTCGTTCAGGAGTGAATGGCTTC
GTCGTCTGATCATCCTCATGACAGAGAAAATAATGACAACCATAACAAGC
CCAATAGACCGGCCCTGAAGATCGACACAACCATCATCGCACCTACTACT
ACCGCCCGCGCCAGCGCCGGTACTGAGGTCCCGTCTCCAGAGTCGTCGTC
TCCTCCGCAAAGTGCCGTCAGCTCGATGTCGACTGCATCGTCCATTCTTT
CCAACTCGTCGAGAGAATTCATCCTGCAGCTCGCTCATCCCAATGCTACT
GATGGTGAACCTGACGACGGTATCGTCCTTCTGATGTGGCCTGTCCCTGT
CTCGACTGCGGCTCCTGTGTCGTCTCCGGTTTCCCCGGCTTTGCCGGTCA
ATCAGGCTGCTCCCGCTCAGGATCAGGATCATGTCCAGGGGCTGGGTGAC
CAGAGTGCCCAGGTGACTGGGTACGATCAGACAACTATGGAGGATCTCGC
AACAGCTATGGCTGAGACTGAGATCTCCTCTGTGTCGGGCACCGATTGTG
ACGAGGGTAATGTCGACCATGTGGATCAGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002859KJC3_002859Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002859-T1KJC3_002859-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002859-T1.cdsKJC3_002859-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002859-T1.utr3p1KJC3_002859-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002859-T1.exon4KJC3_002859-T1.exon4Aspergillus niger KJC3exon
KJC3_002859-T1.exon3KJC3_002859-T1.exon3Aspergillus niger KJC3exon
KJC3_002859-T1.exon2KJC3_002859-T1.exon2Aspergillus niger KJC3exon
KJC3_002859-T1.exon1KJC3_002859-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002859-T1.utr5p3KJC3_002859-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_002859-T1.utr5p2KJC3_002859-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_002859-T1.utr5p1KJC3_002859-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3774723..3776487 -
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