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KJC3_002875-T1, KJC3_002875-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002875-T1
Unique NameKJC3_002875-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3816543..3818982-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002875-T1 ID=KJC3_002875-T1|Name=KJC3_002875-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2440bp|location=Sequence derived from alignment at ch2:3816543..3818982- (Aspergillus niger KJC3)
TGTCGTTTTGGCGGTTTTTACTGTGGCTTCAGTTGATCATTCCATCCATC
CTCCTCCATCTTCGGACCCCAAAAATTCTGCTTCGTCGAAACTTCTCCTC
CCCTCCCCCCCCCCTCTTTCCCTTCTAGTTCCTCCTTTCGCCGGCCGTCA
CTTATCATCACCGACTAATCGGCGCTCTTCTCTTGCAATACTCCGTTTAG
GTTCTTTTTTTTCCTTCCCGCTTTGTTTCTTCTTTTCCTCTTCGTCCTCC
CCTCCTTCCCCCCCTCTTACTCTACTCCCACTCTCCATTTTACTCCTGCT
CCTCCTTTTGGTTGGTGATTTCTTCCAGACCTCCCAAAAAAATCAAGACC
ACTATTTTCCAATTCCTTTCTCCTTCTCCCTCTTTCTCTCTATCTCCCTC
TACATACATCTTCCTCTAGGTATACCTCTCACCCATTCCGGGGTTCACTT
CCCACTCCAAAACCATTGCTCTGCAGCTTCTTACACGTCTGTCTAGTATA
ATCATACCTCTCCTCTTTCACCTATACGATCATCATGTCCGCCAAGTCGA
TTCTCGAAGCTGATGGCAAGGCCATCCTCAACTACCACCTCACTCGTGCT
CCCGTTATCAAGCCTACTCCCCTCCCTCCGTCCTCCACGCACAACCCTCC
TCCTAAGCTCGCCTCCCTTTACTTCCCCGAAGATGTTGCCGTCAAGGATG
TCCTCGATCAGGCTGAGGTCCGCTACCCTTGGCTGTTGACTCCCGGTTCC
AAGTTCGTGGCCAAGCCCGACCAATTGATCAAGAGACGTGGAAAGAGTGG
CCTGTTGGCCCTGAACAAGACCTGGGCCGAGGCCAGGGAATGGATTGAGG
CCCGTGCTGCCAAGGACGTCCAGGTTGAGACGGTCACCGGCGTTCTCCGT
CAGTTCCTGGTTGAGCCCTTCGTTCCTCACCCCCAGGAGACCGAGTACTA
CATCAACATCCACTCCGTGCGTGAGGTAAGTTTTTTGTCTTTCTCCGCCG
TCTGATCGGCGCCCTCCGTAGCTGCGGGGTATCAATGCTAATGTACCGCA
TTAGGGTGACTGGATCCTTTTCACCCACGAGGGTGGTGTCGACGTTGGTG
ATGTTGACGCCAAGGCTGAGAAGCTTCTCATCCCCGTCAACCTCGAGCAG
TACCCCTCCAACGAGGAGATCGCTGCTGCTCTCCTGAGCAAGGTGCCCAA
GGGTGTTCACAACGTCCTCGTTGACTTCATCTCCCGCCTCTACGCCGTCT
ACGTCGACTGCCAGTTCACCTACCTCGAGATCAACCCTCTGGTTGTCATC
CCCAACGCTGATGCCACCTCGGCTGATGTTCACTTCCTCGATCTGGCTGC
CAAGCTCGACCAGACTGCTGAGTTCGAGTGCGGTACCAAGTGGGCCATTG
CTCGTAGCCCCGCCAACCTGGGTCTGCCCACCCTTCCCTCCAGCGACAAG
GTCAACATTGACGCCGGTCCCCCGATGGAGTTCCCCGCTCCTTTCGGTCG
TGAGCTGAGCAAGGAGGAGAAGTTCATCTCCGAGATGGATGCCAAGACTG
GTGCTTCCCTCAAGCTCACCGTCCTCAACGCCAACGGCCGTGTCTGGACC
CTCGTTGCTGGTGGTGGTGCCTCCGTCGTGTACGCTGACGCCATTGCCTC
TGCTGGCTTCGTCAGCGAGCTCGCCAACTACGGTGAGTACTCCGGTGCTC
CCACCGAGACCCAGACCTTCAACTACGCCCGTACCATCCTCGACCTGATG
CTGCGCTCTCCCATCCACCCCGACGGCAAGGTCCTCTTCATCGGTGGTGG
TATTGCCAACTTCACCAACGTTGCCTCCACCTTCAAGGGTGTCATCCGCG
CTCTCCGTGAGGTTGCCCCCGTCCTGAACGAGCACAAGGTCCAGATCTGG
GTTCGTCGTGCTGGTCCCAACTACCAGGAGGGTCTCAAGAACATCAAGGC
TGTTGGTGAGGAGCTTGGCCTCAACATGCACGTCTACGGCCCTGAGATGC
ACGTCAGTGGTATCGTGCCTCTTGCCCTCCTCGGCAAGCAGACCGACATC
AAGGAGTTCGGTTCCGCGTAAAAAAAGAAATAAAGGGCACGTTTCACTGA
ATTCTAATTAATTTAATTTCCTATGAGAATCTCTTTTTTTATATTTCTTC
TCAACTGCATGGCATGATATGGTTGTTTTACGCTATCTTGTTAACTTTTT
TCTTTTATTGACGGTACAAACGGTTTGCCCAGCTTTACACTGCAGGGCAA
GTGGAAGAGGGGATACTCGTTCTGGAGTTGATGCTGTTTAGACTTAAGAT
AGTCGTTAATAGAACGATATGATCTATGACTGTCACTGGAGCCATGTATC
CAACAATCAACATACCACTATATCTATATTATCAGCCATTTAGTACACTT
GTATTTATCATGCGTCCGTATTCTTCAACGCAGTTTGGCA
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Coding sequence (CDS) from alignment at ch2:3816543..3818982-

>KJC3_002875-T1 ID=KJC3_002875-T1|Name=KJC3_002875-T1|organism=Aspergillus niger KJC3|type=CDS|length=2916bp|location=Sequence derived from alignment at ch2:3816543..3818982- (Aspergillus niger KJC3)
GGTGACTGGATCCTTTTCACCCACGAGGGTGGTGTCGACGTTGGTGATGT
TGACGCCAAGGCTGAGAAGCTTCTCATCCCCGTCAACCTCGAGCAGTACC
CCTCCAACGAGGAGATCGCTGCTGCTCTCCTGAGCAAGGTGCCCAAGGGT
GTTCACAACGTCCTCGTTGACTTCATCTCCCGCCTCTACGCCGTCTACGT
CGACTGCCAGTTCACCTACCTCGAGATCAACCCTCTGGTTGTCATCCCCA
ACGCTGATGCCACCTCGGCTGATGTTCACTTCCTCGATCTGGCTGCCAAG
CTCGACCAGACTGCTGAGTTCGAGTGCGGTACCAAGTGGGCCATTGCTCG
TAGCCCCGCCAACCTGGGTCTGCCCACCCTTCCCTCCAGCGACAAGGTCA
ACATTGACGCCGGTCCCCCGATGGAGTTCCCCGCTCCTTTCGGTCGTGAG
CTGAGCAAGGAGGAGAAGTTCATCTCCGAGATGGATGCCAAGACTGGTGC
TTCCCTCAAGCTCACCGTCCTCAACGCCAACGGCCGTGTCTGGACCCTCG
TTGCTGGTGGTGGTGCCTCCGTCGTGTACGCTGACGCCATTGCCTCTGCT
GGCTTCGTCAGCGAGCTCGCCAACTACGGTGAGTACTCCGGTGCTCCCAC
CGAGACCCAGACCTTCAACTACGCCCGTACCATCCTCGACCTGATGCTGC
GCTCTCCCATCCACCCCGACGGCAAGGTCCTCTTCATCGGTGGTGGTATT
GCCAACTTCACCAACGTTGCCTCCACCTTCAAGGGTGTCATCCGCGCTCT
CCGTGAGGTTGCCCCCGTCCTGAACGAGCACAAGGTCCAGATCTGGGTTC
GTCGTGCTGGTCCCAACTACCAGGAGGGTCTCAAGAACATCAAGGCTGTT
GGTGAGGAGCTTGGCCTCAACATGCACGTCTACGGCCCTGAGATGCACGT
CAGTGGTATCGTGCCTCTTGCCCTCCTCGGCAAGCAGACCGACATCAAGG
AGTTCGGTTCCGCGTAAATGTCCGCCAAGTCGATTCTCGAAGCTGATGGC
AAGGCCATCCTCAACTACCACCTCACTCGTGCTCCCGTTATCAAGCCTAC
TCCCCTCCCTCCGTCCTCCACGCACAACCCTCCTCCTAAGCTCGCCTCCC
TTTACTTCCCCGAAGATGTTGCCGTCAAGGATGTCCTCGATCAGGCTGAG
GTCCGCTACCCTTGGCTGTTGACTCCCGGTTCCAAGTTCGTGGCCAAGCC
CGACCAATTGATCAAGAGACGTGGAAAGAGTGGCCTGTTGGCCCTGAACA
AGACCTGGGCCGAGGCCAGGGAATGGATTGAGGCCCGTGCTGCCAAGGAC
GTCCAGGTTGAGACGGTCACCGGCGTTCTCCGTCAGTTCCTGGTTGAGCC
CTTCGTTCCTCACCCCCAGGAGACCGAGTACTACATCAACATCCACTCCG
TGCGTGAGGGTGACTGGATCCTTTTCACCCACGAGGGTGGTGTCGACGTT
GGTGATGTTGACGCCAAGGCTGAGAAGCTTCTCATCCCCGTCAACCTCGA
GCAGTACCCCTCCAACGAGGAGATCGCTGCTGCTCTCCTGAGCAAGGTGC
CCAAGGGTGTTCACAACGTCCTCGTTGACTTCATCTCCCGCCTCTACGCC
GTCTACGTCGACTGCCAGTTCACCTACCTCGAGATCAACCCTCTGGTTGT
CATCCCCAACGCTGATGCCACCTCGGCTGATGTTCACTTCCTCGATCTGG
CTGCCAAGCTCGACCAGACTGCTGAGTTCGAGTGCGGTACCAAGTGGGCC
ATTGCTCGTAGCCCCGCCAACCTGGGTCTGCCCACCCTTCCCTCCAGCGA
CAAGGTCAACATTGACGCCGGTCCCCCGATGGAGTTCCCCGCTCCTTTCG
GTCGTGAGCTGAGCAAGGAGGAGAAGTTCATCTCCGAGATGGATGCCAAG
ACTGGTGCTTCCCTCAAGCTCACCGTCCTCAACGCCAACGGCCGTGTCTG
GACCCTCGTTGCTGGTGGTGGTGCCTCCGTCGTGTACGCTGACGCCATTG
CCTCTGCTGGCTTCGTCAGCGAGCTCGCCAACTACGGTGAGTACTCCGGT
GCTCCCACCGAGACCCAGACCTTCAACTACGCCCGTACCATCCTCGACCT
GATGCTGCGCTCTCCCATCCACCCCGACGGCAAGGTCCTCTTCATCGGTG
GTGGTATTGCCAACTTCACCAACGTTGCCTCCACCTTCAAGGGTGTCATC
CGCGCTCTCCGTGAGGTTGCCCCCGTCCTGAACGAGCACAAGGTCCAGAT
CTGGGTTCGTCGTGCTGGTCCCAACTACCAGGAGGGTCTCAAGAACATCA
AGGCTGTTGGTGAGGAGCTTGGCCTCAACATGCACGTCTACGGCCCTGAG
ATGCACGTCAGTGGTATCGTGCCTCTTGCCCTCCTCGGCAAGCAGACCGA
CATCAAGGAGTTCGGTTCCGCGTAAATGTCCGCCAAGTCGATTCTCGAAG
CTGATGGCAAGGCCATCCTCAACTACCACCTCACTCGTGCTCCCGTTATC
AAGCCTACTCCCCTCCCTCCGTCCTCCACGCACAACCCTCCTCCTAAGCT
CGCCTCCCTTTACTTCCCCGAAGATGTTGCCGTCAAGGATGTCCTCGATC
AGGCTGAGGTCCGCTACCCTTGGCTGTTGACTCCCGGTTCCAAGTTCGTG
GCCAAGCCCGACCAATTGATCAAGAGACGTGGAAAGAGTGGCCTGTTGGC
CCTGAACAAGACCTGGGCCGAGGCCAGGGAATGGATTGAGGCCCGTGCTG
CCAAGGACGTCCAGGTTGAGACGGTCACCGGCGTTCTCCGTCAGTTCCTG
GTTGAGCCCTTCGTTCCTCACCCCCAGGAGACCGAGTACTACATCAACAT
CCACTCCGTGCGTGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002875KJC3_002875Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002875-T1KJC3_002875-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002875-T1.cdsKJC3_002875-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002875-T1.utr3p1KJC3_002875-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002875-T1.exon2KJC3_002875-T1.exon2Aspergillus niger KJC3exon
KJC3_002875-T1.exon1KJC3_002875-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002875-T1.utr5p1KJC3_002875-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013650
DBxrefInterPro:IPR032263
DBxrefInterPro:IPR016102
DBxrefPFAM:PF16114
DBxrefPFAM:PF08442
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3816543..3818982 -
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