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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:150383..156012+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002996-T1 ID=KJC3_002996-T1|Name=KJC3_002996-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5630bp|location=Sequence derived from alignment at ch3:150383..156012+ (Aspergillus niger KJC3)
CTGCGGAACAGCCACACTGGGCGGATGACCGAGACATCCACCCCAAAAAT
AGCACCAGAACCCTGCTCGAGACGGCACAATCTACAATTTGTGTCTTTTG
ACTTTTGAGAGCCTACCATCCCTTTTATGTGTTCAGTTCTACTGGGTCCT
GAGATTGGCCATGACTGCGCAGTGTGAAGATGTCAAATGTCCGAATATGC
GTGAGACATGGACGGTCACGGAGCGCCACGCCCATGGGTGATCCGCCCGC
GTGTGGAGCCAGCCAGTCGAACGCTGGGAACGTCTCGACTCAGTTCCCAA
CTAGTCGGACAGTTAGTTCGTAATCCACCACTCTGGTGCCTCAGGCGAAG
GGATGACTCCTGGAAGACTATTTACCCCCTTCGCTTGGAGATTGGACCAT
TGCTCCATAATAATCCTATTGCCAAGATAACATTTAATTCTCTGCCCTGA
GAGGAGGACCGAACACATGGGTATATAAGAAGAGGAAGAGGAACAGACCG
TTAGGAGTATTTCCCCCTGGACATCGGAACACCAAGCAAGTCCATTTGAA
GACAGTCTGATGGCAGCCTGCCAGCCGGCCGTTTGACCGAGCTGGTTGCT
GCCTGGGACCCGAGTGGTGATTGGTCTAATAGCTTGACACTGACCCCCTT
CCTACCCCTTTAGTGCTCGCTCCTCAAGTCAGAGAACCAACAATTCGTGA
CGAGGGAGCTGATCCTGGTTCTGATGGTGAAACTGGCGTTGCCTTGGGAC
CTGTCACTTTGGTGTCTGATTATCTTACAGCCTTGCGTGGAAAACGAGTC
AGCTCAACTGCACGATGATGATGGATTTCCCTATCGCGCGCGAGAGAGCA
ACTGAGCAGAAACTTTTCCAGCGACGGCAATCATGCCCTCATTTCCTTTA
GCTTCTGCTCTGTCTGCTTTACTCCTTTTCCCCCCCCCCGTTTCTTTCCT
CTCATTTCCTCTTCTCATCCAGTCCATTGAACCTACCGAACTGGAAACTT
GCCGGAAATGGAATTTTGCGTGGCCGAAATCTCCACTGTGGATCACGCGA
TGTTCGCTGGCCCCAACGGCAGCCAATCATAATAGGGTTATAGCTCGCTT
GCTCGGAAAATCGGCCGGACCGGGGTCCACCGGCTGCGCGTCTTTTTCGG
GGGAACCTCTGGACTTCTCGCCTTGTTCACCTTCATTTCCACCTGCACCA
CGCTTCTGCTGCGTGTCTCCCATCCGAACTCGCATGGCTACTCGGTCTTA
GCTACGATAGTCGCTCGGACTAAATCGCCGCTAGTAGGCATCCTCATTCT
TGGGTCCAATAGGATTGCCCCGGCCTTCGTCATCCATTGGATCCGATCCG
GGAACCATGACAGTCCGCCGAATTTTCTCGACGCCCACCTTCAACGCCCG
CTCATCACATCATCCTGTCTGCCCCCCTCCTCCGTCCTCGTCGTCGCAAT
CGTTTTCCACTGTCAACGCGGCCACGCCTCTCGCCTGTTCCTTCCCAAGA
GCGCCATGTTGGAGCACTTCTACATTGTCCGTCGAGTCCGGAGGACGCAG
GGTCATGAGCCAGTATAAATATATCCTGTCGACCATGGGTACCCGTTGAA
TGGAGGTGGTCCCCCCGGATAAGGATTTTTACTCCCGGTGGAGCCAACCT
GCTGACGACAGAGATCTTAAACATCCGCTACCGACAAGTCAAGACCGTCG
TTGGCCATTCTCAGTTTCAGTGCACCGCCCGGCGTGGCTATAATGCCGGC
CTGCATTGTTCCTGGCGGGCCAAAAGGGAAAAATATCCTGCTCCCACCGC
GATTGGGACAAGCCTCATCTGGCTACTATTCTGGTATCGTCCCGGTCCGC
CAGATATATCGCACACTTGTAAACATGCATCCTCCGTCGAATTATCGTCA
CTGCTCCCCAAGGCTTAGACTTTCATCCCCCGCCATCTCGTCTTCTTATT
TGCCCTGTCCCGTAGCTGCTTCGTTCCCCCCTATATATAGTTCTTGGGCA
CGTATCCAATGATCCATGGGTGCTCCACTCCTCTAGCAGTTGGTTTATCT
ACGCCCTAGCCCAATTGACGGTTGCGTGGTACCGTTGTTGTCCCCAGCCC
ATTTTTTTCCCCTTAGGCCCTCTTTCCTTCCCTCCTTTGGGGGACTCCTG
TTTATTTTTGTGCCCTTTTTAATTTTACAGTGTTATTTTTGGGATCCTTC
TTTTGCCCAGCCCCAGAACCTCCCTAGAACCCTCGTTATACTTTTTCCCT
TTCCCCGTTTGCCTCATTAAGACCACCCGTCGCAACTTCAGGCAATCCCA
TCTTCAACCTCCAAGATGGGTACGCCAACACCTTACTCGGCCCATTCGCC
GCGGGACAGCGAAAGCAGCTACTTCTCCCACACGTCTCCCCCCCATGGTG
TGAGTGTGTCCCGTCAAGCTGGCCGGCTGTTTCAATACCTAATCGTGATA
GCACCAAACTTACCACTCCGAGGAACATGAGCACGACGAGCAGGAACAGT
CTCTGCTGGAGCGCAACAATTCCAGTCACTATGGCACGCCCTTCGATGAT
CCCGCCGTGTCGACAGACTCCCTCCGTCGCTACACTCTGCACGACGACGG
TCCAGCGGTCTTCGCCGCGCCTCCTTACCAAGAATCCGAAGCCGCTTCCG
AAAACACCTTCCGTGCCCGGAGCAATGGCGACAAGGCTTCCCGTGAAGGG
AGTCGCGCGGGTGCCCTGCGCCGTTACGGAACGAGAAAGATCAACCTAGT
GCAAGGTTCCGTTCTGAGTGTCGACTACCCGGTGCCGAGTGCCATTCAGA
ACGCCATCCAGCCTCAATACCGGGATGCGGAGGAGGCCTTTTCCGAAGAA
TTCACGCACATGAGATGTAGGTGCCACACGCGCCTTCGCGGAGATGGCCA
ATTGTCCGGCTGACCAAAGCATCGCAGACACGGCCGCCACCTGTGATCCC
GACGAGTTCACGCTGCGCAATGGCTACAATCTCCGGCCGGCTATCTACAA
CCGGCATACCGAATTGCTGATCGCCATCACCTACTACAACGAAGACAAGG
TGTTGACCGCGCGTACCCTTCACGGTGTCATGCAGAACATCCGTGATATT
GTCAACTTGAAGAAATCCGAGTTCTGGAACAAGGGTGGCCCTGCTTGGCA
GAAGATCGTGGTCTGTTTGGTTTTCGATGGTATTGAGCCATGCGACAAAA
ACACACTGGATGTGTTGGCGACGATTGGTATCTACCAGGATGGAGTCATG
AAGAAGGACGTTGACGGGCGGGAAACCGTCGCCCACGTTGTAAGTTTGCT
TCTTTCCACTTTTTCTTCCGCTGCCGCCTTTGGTGCAGACCGCCTTCGGA
CCATCGGAGATCGGCACCGCAAAGGAGGAGGATGAATGAGAGACACTGAC
CGCCGCAGTTTGAATATACTACCCAATTGTCCGTCACTCCGACGCAGCAG
TTGATCCGGCCCCAGGGCAATGAGTCGACCAACTTGCCCCCCGTGCAGAT
GATCTTCTGTCTCAAGCAGAAGAATAGCAAGAAGATCAACTCCCACCGTT
GGCTGTTCAACGCCTTCAGTCGTATCTTGAACCCGGAAGTCGTCATTCTG
CTGGATGCCGGTACTAAGCCCGGACACAAATCTCTGCTTGCTCTGTGGGA
GGCCTTCTACAATGACAAGACTCTCGGTGGAGCCTGTGGTGAGATCCATG
CAATGCTGGGTCAGGGCTGGCGCAAGGTCATCAATCCGTTAGTCGCTGCG
CAGAACTTTGAGTACAAGATCTCCAATATTCTCGATAAACCTCTGGAAAG
TGCATTCGGTTATGTCAGTGTCTTGCCTGGTGCATTCTCTGCCTATCGGT
ATCGCGCTATCATGGGCCGTCCCCTGGAGCAATACTTCCACGGAGACCAT
ACGTTATCTAAGCGTCTTGGAAAGAAGGGTATTGACGGCATGAATATCTT
CAAAAAGAACATGTTCTTGGCTGAGGATCGTATTCTTTGCTTCGAATTGG
TGGCCAAGGCTGGTTTCAAGTGGCATCTCAGTTACGTCAAGGCGTCCAAG
GGTGAGACCGATGTTCCGGAAGGTGCAGCCGAATTCATCAGTCAAAGACG
TCGTTGGTTGAACGGTTCTTTCGCTGCCGGTCTGTATGCCATCATGCATT
TCGGCCGTATCTACCGCAGTGGTCACAGCATCATTCGCATGTTCTTCCTG
CATATTCAGATGCTCTACAACGTGTGTCAACTGATCATGACCTGGTTCTC
ACTTGCCTCTTACTGGCTCACTAGTTCCGTCATCATGGATTTGGTGGGTA
CGCCGTCTACGAGTAACAAGAACAAGGGTTGGCCATGGGGCAACGAAGCG
TCGCCCATTGTCAACAACTTCGTCAAATACGGTTATGTCTGGGTTCTTAC
GCTGCAGTTTATCATGGCTTTGGGTAATCGGCCGAAAGGTGTCAAGATCC
CTTACATCCTATCCTACCTTTACTTCTCTCTTGTCCAGCTGTACGTCCTC
ATCCTGTCGTTCTACCTGGTCGTGGGTGCCTTCAACGGTGGTATGATGGA
CTTCAACTTCGACGAAGGCGTCGGCACATTCCTCTCCTCATTCTTCAGCT
CCAGCGGTGGTGGTATCGTGCTGATCGCTTTGGTCTCCACTTACGGAATC
TACATCATTGCTAGTGTCCTGTATATGGATCCCTGGCACATCATCACCAG
TTCCTGGGCCTACTTCCTGGGTATGACGACCTCGATCAACATCTTGATGG
TTTACGCGTTCTGTAACTGGCACGACGTTTCTTGGGGTACCAAGGGTTCG
GACAAGGCCGAGGCACTGCCTTCCGCGCAAACCAAAAAGGACGACGACAA
CAAGCAGAACTTCATCGAGGAAATCGACAAGCCGCAAGCCGATATCGACA
GTCAGTTCGAGGCGACTGTGAAGAGAGCGTTGACGCCGTGGATCGAACCG
GAGGAAGAGGGCGGCAAGAGTTTGGACGATGCCTACCGCAACTTCCGTAC
CGTGCTTGTGTGTCTGTGGGTGTTTAGTAACTTGCTCGTAACGCTGTTGA
TCACCGCCACTGGAGTGGACAAGATGTGTCTGACGGTACGTATCATCCCT
TTGCTTTGGTAAAGCCATAATCTGTGACATCTTCTAACGAACTGCAGAAC
ACCTCCACCACCCGTACATCCTGGTACTTCGAAGTCATTCTGTGGATTAC
GGCCGGTCTGTCGCTGTTCCGCTTCATCGGCTCGTTGTGGTTCTTGGGCC
GGTCGGGTATTCTGTGCTGTGTGTCCCGGCGCTAATCGCGATCGCGTTGG
AGAAAAGAGAGCGCGCCGAGATCCTATTCTATCTATACCTATCCTTGCAT
GATTATGTCGTGTTATCCAGCGCGTGGTTCCATGGGATTGTACATTTATG
GACCTGTTTGAGTGTTGTTCTATTTACCCATTTTGTTTCCCCCTTCTATG
CAATGATAATAATAGAGCGGTTTTGATCTGTTAGTGGAATCTTTGGAATT
TAGAATAGCTGAGATGATTTGATAAAAGAATGACATGACCAATTGCATAC
TACCAGTTTACCGTGCGAGCAGAGTGTTCAAACCCAATGGATAGATACTA
TTATCATCAATGAAAGAAACACATAGCGCC back to topCoding sequence (CDS) from alignment at ch3:150383..156012+ >KJC3_002996-T1 ID=KJC3_002996-T1|Name=KJC3_002996-T1|organism=Aspergillus niger KJC3|type=CDS|length=3450bp|location=Sequence derived from alignment at ch3:150383..156012+ (Aspergillus niger KJC3)
ATGATCTTCTGTCTCAAGCAGAAGAATAGCAAGAAGATCAACTCCCACCG
TTGGCTGTTCAACGCCTTCAGTCGTATCTTGAACCCGGAAGTCGTCATTC
TGCTGGATGCCGGTACTAAGCCCGGACACAAATCTCTGCTTGCTCTGTGG
GAGGCCTTCTACAATGACAAGACTCTCGGTGGAGCCTGTGGTGAGATCCA
TGCAATGCTGGGTCAGGGCTGGCGCAAGGTCATCAATCCGTTAGTCGCTG
CGCAGAACTTTGAGTACAAGATCTCCAATATTCTCGATAAACCTCTGGAA
AGTGCATTCGGTTATGTCAGTGTCTTGCCTGGTGCATTCTCTGCCTATCG
GTATCGCGCTATCATGGGCCGTCCCCTGGAGCAATACTTCCACGGAGACC
ATACGTTATCTAAGCGTCTTGGAAAGAAGGGTATTGACGGCATGAATATC
TTCAAAAAGAACATGTTCTTGGCTGAGGATCGTATTCTTTGCTTCGAATT
GGTGGCCAAGGCTGGTTTCAAGTGGCATCTCAGTTACGTCAAGGCGTCCA
AGGGTGAGACCGATGTTCCGGAAGGTGCAGCCGAATTCATCAGTCAAAGA
CGTCGTTGGTTGAACGGTTCTTTCGCTGCCGGTCTGTATGCCATCATGCA
TTTCGGCCGTATCTACCGCAGTGGTCACAGCATCATTCGCATGTTCTTCC
TGCATATTCAGATGCTCTACAACGTGTGTCAACTGATCATGACCTGGTTC
TCACTTGCCTCTTACTGGCTCACTAGTTCCGTCATCATGGATTTGGTGGG
TACGCCGTCTACGAGTAACAAGAACAAGGGTTGGCCATGGGGCAACGAAG
CGTCGCCCATTGTCAACAACTTCGTCAAATACGGTTATGTCTGGGTTCTT
ACGCTGCAGTTTATCATGGCTTTGGGTAATCGGCCGAAAGGTGTCAAGAT
CCCTTACATCCTATCCTACCTTTACTTCTCTCTTGTCCAGCTGTACGTCC
TCATCCTGTCGTTCTACCTGGTCGTGGGTGCCTTCAACGGTGGTATGATG
GACTTCAACTTCGACGAAGGCGTCGGCACATTCCTCTCCTCATTCTTCAG
CTCCAGCGGTGGTGGTATCGTGCTGATCGCTTTGGTCTCCACTTACGGAA
TCTACATCATTGCTAGTGTCCTGTATATGGATCCCTGGCACATCATCACC
AGTTCCTGGGCCTACTTCCTGGGTATGACGACCTCGATCAACATCTTGAT
GGTTTACGCGTTCTGTAACTGGCACGACGTTTCTTGGGGTACCAAGGGTT
CGGACAAGGCCGAGGCACTGCCTTCCGCGCAAACCAAAAAGGACGACGAC
AACAAGCAGAACTTCATCGAGGAAATCGACAAGCCGCAAGCCGATATCGA
CAGTCAGTTCGAGGCGACTGTGAAGAGAGCGTTGACGCCGTGGATCGAAC
CGGAGGAAGAGGGCGGCAAGAGTTTGGACGATGCCTACCGCAACTTCCGT
ACCGTGCTTGTGTGTCTGTGGGTGTTTAGTAACTTGCTCGTAACGCTGTT
GATCACCGCCACTGGAGTGGACAAGATGTGTCTGACGAACACCTCCACCA
CCCGTACATCCTGGTACTTCGAAGTCATTCTGTGGATTACGGCCGGTCTG
TCGCTGTTCCGCTTCATCGGCTCGTTGTGGTTCTTGGGCCGGTCGGGTAT
TCTGTGCTGTGTGTCCCGGCGCTAAATGATCTTCTGTCTCAAGCAGAAGA
ATAGCAAGAAGATCAACTCCCACCGTTGGCTGTTCAACGCCTTCAGTCGT
ATCTTGAACCCGGAAGTCGTCATTCTGCTGGATGCCGGTACTAAGCCCGG
ACACAAATCTCTGCTTGCTCTGTGGGAGGCCTTCTACAATGACAAGACTC
TCGGTGGAGCCTGTGGTGAGATCCATGCAATGCTGGGTCAGGGCTGGCGC
AAGGTCATCAATCCGTTAGTCGCTGCGCAGAACTTTGAGTACAAGATCTC
CAATATTCTCGATAAACCTCTGGAAAGTGCATTCGGTTATGTCAGTGTCT
TGCCTGGTGCATTCTCTGCCTATCGGTATCGCGCTATCATGGGCCGTCCC
CTGGAGCAATACTTCCACGGAGACCATACGTTATCTAAGCGTCTTGGAAA
GAAGGGTATTGACGGCATGAATATCTTCAAAAAGAACATGTTCTTGGCTG
AGGATCGTATTCTTTGCTTCGAATTGGTGGCCAAGGCTGGTTTCAAGTGG
CATCTCAGTTACGTCAAGGCGTCCAAGGGTGAGACCGATGTTCCGGAAGG
TGCAGCCGAATTCATCAGTCAAAGACGTCGTTGGTTGAACGGTTCTTTCG
CTGCCGGTCTGTATGCCATCATGCATTTCGGCCGTATCTACCGCAGTGGT
CACAGCATCATTCGCATGTTCTTCCTGCATATTCAGATGCTCTACAACGT
GTGTCAACTGATCATGACCTGGTTCTCACTTGCCTCTTACTGGCTCACTA
GTTCCGTCATCATGGATTTGGTGGGTACGCCGTCTACGAGTAACAAGAAC
AAGGGTTGGCCATGGGGCAACGAAGCGTCGCCCATTGTCAACAACTTCGT
CAAATACGGTTATGTCTGGGTTCTTACGCTGCAGTTTATCATGGCTTTGG
GTAATCGGCCGAAAGGTGTCAAGATCCCTTACATCCTATCCTACCTTTAC
TTCTCTCTTGTCCAGCTGTACGTCCTCATCCTGTCGTTCTACCTGGTCGT
GGGTGCCTTCAACGGTGGTATGATGGACTTCAACTTCGACGAAGGCGTCG
GCACATTCCTCTCCTCATTCTTCAGCTCCAGCGGTGGTGGTATCGTGCTG
ATCGCTTTGGTCTCCACTTACGGAATCTACATCATTGCTAGTGTCCTGTA
TATGGATCCCTGGCACATCATCACCAGTTCCTGGGCCTACTTCCTGGGTA
TGACGACCTCGATCAACATCTTGATGGTTTACGCGTTCTGTAACTGGCAC
GACGTTTCTTGGGGTACCAAGGGTTCGGACAAGGCCGAGGCACTGCCTTC
CGCGCAAACCAAAAAGGACGACGACAACAAGCAGAACTTCATCGAGGAAA
TCGACAAGCCGCAAGCCGATATCGACAGTCAGTTCGAGGCGACTGTGAAG
AGAGCGTTGACGCCGTGGATCGAACCGGAGGAAGAGGGCGGCAAGAGTTT
GGACGATGCCTACCGCAACTTCCGTACCGTGCTTGTGTGTCTGTGGGTGT
TTAGTAACTTGCTCGTAACGCTGTTGATCACCGCCACTGGAGTGGACAAG
ATGTGTCTGACGAACACCTCCACCACCCGTACATCCTGGTACTTCGAAGT
CATTCTGTGGATTACGGCCGGTCTGTCGCTGTTCCGCTTCATCGGCTCGT
TGTGGTTCTTGGGCCGGTCGGGTATTCTGTGCTGTGTGTCCCGGCGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004100 | chitin synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006031 | chitin biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002996-T1.utr5p1 | KJC3_002996-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002996-T1.utr3p1 | KJC3_002996-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT2_Chitin_synth_1 |
| DBxref | InterPro:IPR029044 |
| DBxref | InterPro:IPR004834 |
| DBxref | PFAM:PF13632 |
| DBxref | PFAM:PF08407 |
| DBxref | PFAM:PF01644 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:150383..156012 + |
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