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KJC3_003086-T1, KJC3_003086-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003086-T1
Unique NameKJC3_003086-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:659837..660623-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003086-T1 ID=KJC3_003086-T1|Name=KJC3_003086-T1|organism=Aspergillus niger KJC3|type=mRNA|length=787bp|location=Sequence derived from alignment at ch3:659837..660623- (Aspergillus niger KJC3)
CAAACAGCAGAGAGAAACACGCCTGAAACAGAGTGATCACTGGAAAGTTT
GAACGAGCAGTTTTCGGAGGAATTTGCACTCTACTCATATTTTATGCTTT
GCAAGGCAATGCCACGTAAGAACAATGAATATTATGCTGTTCTTACTGGA
CGAATTGATGAGCCGACAATATTCTCATCGTGGTATATCTGTCCGCACAT
CATAGGGGGAACTTGCTTAATAATTTCTACAGGGGCGATGCACACCCTCG
CGTGACTGGATGCAGGTCAGACCACGAGGCCTTTGAAAATCTTCTAGAAG
CACAAAATTTCATGGAGAAAAATGGAGTCAAGCAGCCTAAACTAGTAATC
AAGGAAGGGGCCGGAGAAACTACACCATTACTAGGGAAGGAAGCCTTTTA
CGCAGTTGCCAATGGTAGAAACCCGGGAATTTACCCCTACTATCAGTAAG
CTGACCCAGTGCTCAATGGTAAAACGAAAACTACTCACAAATAAAATCAG
TGGGAAAACGAAGCCAGAGGTTGATCGATTCGATGGTGCTTGTCATAAGC
ACTTTAGAACACATTCCCAGGCAGAAGCTTTTATTGAAGATTGGAAAAAT
TCCTATGCTGACGTTTGCCGGAGAGAGATAAAAGCAAAGCTAGATCAAGG
ATTCAGGCCGCCAAATATGAAACTGAGGTTCGATATCTTGCAAGCAAATG
CCGAATACGATATAAGCGAAGATATTACAAAGATGACCGAGAAGCTGATG
GTGAAGAGTGAATAGTGGGAGCATTTATTTATTCATG
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Coding sequence (CDS) from alignment at ch3:659837..660623-

>KJC3_003086-T1 ID=KJC3_003086-T1|Name=KJC3_003086-T1|organism=Aspergillus niger KJC3|type=CDS|length=1701bp|location=Sequence derived from alignment at ch3:659837..660623- (Aspergillus niger KJC3)
TGGGAAAACGAAGCCAGAGGTTGATCGATTCGATGGTGCTTGTCATAAGC
ACTTTAGAACACATTCCCAGGCAGAAGCTTTTATTGAAGATTGGAAAAAT
TCCTATGCTGACGTTTGCCGGAGAGAGATAAAAGCAAAGCTAGATCAAGG
ATTCAGGCCGCCAAATATGAAACTGAGGTTCGATATCTTGCAAGCAAATG
CCGAATACGATATAAGCGAAGATATTACAAAGATGACCGAGAAGCTGATG
GTGAAGAGTGAATAGGGGCGATGCACACCCTCGCGTGACTGGATGCAGGT
CAGACCACGAGGCCTTTGAAAATCTTCTAGAAGCACAAAATTTCATGGAG
AAAAATGGAGTCAAGCAGCCTAAACTAGTAATCAAGGAAGGGGCCGGAGA
AACTACACCATTACTAGGGAAGGAAGCCTTTTACGCAGTTGCCAATGGTA
GAAACCCGGGAATTTACCCCTACTATCAATGCTTTGCAAGGCAATGCCAC
GTAAGAACAATGAATATTATGCTGTTCTTACTGGACGAATTGATGAGCCG
ACAATATTCTCATCGTGTGGGAAAACGAAGCCAGAGGTTGATCGATTCGA
TGGTGCTTGTCATAAGCACTTTAGAACACATTCCCAGGCAGAAGCTTTTA
TTGAAGATTGGAAAAATTCCTATGCTGACGTTTGCCGGAGAGAGATAAAA
GCAAAGCTAGATCAAGGATTCAGGCCGCCAAATATGAAACTGAGGTTCGA
TATCTTGCAAGCAAATGCCGAATACGATATAAGCGAAGATATTACAAAGA
TGACCGAGAAGCTGATGGTGAAGAGTGAATAGGGGCGATGCACACCCTCG
CGTGACTGGATGCAGGTCAGACCACGAGGCCTTTGAAAATCTTCTAGAAG
CACAAAATTTCATGGAGAAAAATGGAGTCAAGCAGCCTAAACTAGTAATC
AAGGAAGGGGCCGGAGAAACTACACCATTACTAGGGAAGGAAGCCTTTTA
CGCAGTTGCCAATGGTAGAAACCCGGGAATTTACCCCTACTATCAATGCT
TTGCAAGGCAATGCCACGTAAGAACAATGAATATTATGCTGTTCTTACTG
GACGAATTGATGAGCCGACAATATTCTCATCGTGTGGGAAAACGAAGCCA
GAGGTTGATCGATTCGATGGTGCTTGTCATAAGCACTTTAGAACACATTC
CCAGGCAGAAGCTTTTATTGAAGATTGGAAAAATTCCTATGCTGACGTTT
GCCGGAGAGAGATAAAAGCAAAGCTAGATCAAGGATTCAGGCCGCCAAAT
ATGAAACTGAGGTTCGATATCTTGCAAGCAAATGCCGAATACGATATAAG
CGAAGATATTACAAAGATGACCGAGAAGCTGATGGTGAAGAGTGAATAGG
GGCGATGCACACCCTCGCGTGACTGGATGCAGGTCAGACCACGAGGCCTT
TGAAAATCTTCTAGAAGCACAAAATTTCATGGAGAAAAATGGAGTCAAGC
AGCCTAAACTAGTAATCAAGGAAGGGGCCGGAGAAACTACACCATTACTA
GGGAAGGAAGCCTTTTACGCAGTTGCCAATGGTAGAAACCCGGGAATTTA
CCCCTACTATCAATGCTTTGCAAGGCAATGCCACGTAAGAACAATGAATA
TTATGCTGTTCTTACTGGACGAATTGATGAGCCGACAATATTCTCATCGT
G
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003086KJC3_003086Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003086-T1KJC3_003086-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003086-T1.cdsKJC3_003086-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003086-T1.utr3p1KJC3_003086-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003086-T1.exon3KJC3_003086-T1.exon3Aspergillus niger KJC3exon
KJC3_003086-T1.exon2KJC3_003086-T1.exon2Aspergillus niger KJC3exon
KJC3_003086-T1.exon1KJC3_003086-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003086-T1.utr5p1KJC3_003086-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009027
DBxrefInterPro:IPR037056
DBxrefInterPro:IPR011320
DBxrefPFAM:PF01693
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:659837..660623 -
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