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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1248243..1251267+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003212-T1 ID=KJC3_003212-T1|Name=KJC3_003212-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3025bp|location=Sequence derived from alignment at ch3:1248243..1251267+ (Aspergillus niger KJC3)
CTCTCCCCATTCTATTTCTCAGGTGTTTGTGTTACTATAAATCGCTGGCT
AACTGCTGGCTGCCTGCCTGTGTGTGGCCTGCTCCACTTGAGCAATTGCT
TGTGAGCGTGGTTTGTGTTACATTAGCTACGTTACAGAGTACTACATTAT
TAACTAATTACGGACTGGCATTCTTGCCTTGTCTTTCTTTTTGCTATTGT
CTCCCACGGTTCTCTTCCTCTTGATCCTTCTCTCAATTCCACTTTATTCA
CAGCACACGGATTCGTCATTCATCCACTATGGGGTCATCAGTGGAAATGG
AATCCGTCGATCTCGTTATTGTCGGAGCAGGTATTTTCCACCGTCCCTCC
TCCATCCTTTCATCCTTCCGTCTATCCCTTGCATGCCTCTTCCCGTCTCA
TTCCCTTCCCCCCAATGTCGCGCTCTCCATCATCTACCCCCCTCCCTCTC
TCAATACATACACAAGACTAACAAGCCTCTGTAAAAAGGATGGTCCGGCC
TCTCCGCCCTCAAAACCTACCACGAGGTGCACCCCACCGCCCGCATCCTC
CTGCTGGATAGCGCCACCACCATCGGCGGCGTCTGGGCCGCCCACCGCCT
CTACAAGGGCCTCAAATCCAACAACATGCTGGGCACCTACGAATACAGCG
ACTTCCCCATGGACAGCGCCACCTTCGGCGTGAAGCCAGGCGAACATATC
CCCGGCCACGTGCTGCACCAGTACCTCAATGCATACGTGGATCACTTCAA
CCTTCGGGATATGATCCGACTAGAGACGAAGGTGGAGGTCGTGGAGCATG
TGGATGAGGATGGGAGCTGGACGCTCACCACCTCCCCTACTTCTTCCTCT
GACATTGAGAAGAAAGACACCATCCACACGAAGAAACTCCTCCTCGCAAC
AGGAATGACCTCCCGACCCTTCCTCCCCCACTTCCCCGGACAAGAAACCT
ACCCCCACACCATCACCCACACCGGCACTCTCCTCCCCCACCAAGCCACC
CTCTTCCAGAAAGATAGGAAAGTAGTCATCTACGGCGGTACCAAATCCGC
CTGGGACGCCGTGCACACCGCCGCCACGTCCGGGGCCAACGTGACCTGGA
TCATCCGATCCACGGGCCACGGGCCTACCTGGATGTCTCCGCCGTACGTG
ACTCCTTTGAAGAGATGGTTCGAGAAGCTGCTTACCACGCGACTTCTCAC
ATGGTTCTCGCCATGTATCTGGGGCGATGCAGACGGGTGTTCTGGAATCC
GATGGTTCCTGCATTCTACCTGGTTAGGACGGAAGATCGTAAATGCGTTC
TGGGCCGTGCTGACGAACGACCTACTAACCCTGAACAACTACGATGGCCA
CGAGGAAACGAAGAAATTGAAGCCGTGGATAAGTCCGTTCTGGGTGGCTA
GTGGACTGAGCATCTTGAACTACGAGACTGATTTCTATTCTCTGATCCGG
GAGGGTAAGGTCCGGGTGGTGATCGATGAGATTATGGAGCTTACGGAAGA
TGGCGGCATCTCTCTTGGTGATTCCGGGGAGGTGGTGCAGAGTGAGGGGC
TGATTTGTGCTACGGGCTGGGAGGCGACGCCGAATATGGAGTTTAGACCT
GCGGAGATTGAGAGGGACTTGGGGTTCCCTTGGGCGGAGGATTACCTGGC
GACGCCGATGGTGAAGAGGGCAGATCAGGAGATCTTGACGCGGTTCCCGA
AGCTAAGGGAATCGCTCAGTGTCGGGGTCAATGCGAAGGAGGATTATCGC
CCCTTGGCGAAGGGGGCACCCGCTACGGCGAAGCATCCGTTCCGGTTGGT
AAGGTTCATGGTGCCGGCGGCGTTTATGAAGGAGCGGTCGGTGGCGGTGC
TGGGGACGCCGATGACGGTGAATACGCCGCTGATTGCGCAGGTGCAGGCG
CTGTGGGTGGCGGCGTTTATGGGAGATGGGATGGGGGTGAAGGCGCGGGA
GACGTGTCCGGAGGAGTCGAAGAAGGGATTACTAACAGAAGGAGAGGTGG
ACGGGGACGTGGTGTGGGAGATGGCGCTGCATACGCAATTCGGGAAATAT
CGGTGTCCGGGAGGGTTTGGAAAGAGGAATCTAGATACCGTGTTTGATAC
GTTGCCGTATATTGATCTGTTGTTGCAGGATTTGGGGCTGGATTGGCGGC
GGAAGGGGAGTTTGAAGTGGTTAGAGCCGTATGGGATGGAGGATTATAAG
GGGTTGGTGGAGGAGTGGTTGAAATGATCTGTCCATAACTTATCTTAGTA
GTACTAGTAGTACCTTTTGTTAATAGGCAACTTGAATACATGTGTGTGTG
TCCATTTCAGCTACAACTTGTTGACTAACACTACAACCTGAATCCTTCAA
ATACAGCTACTCCACCATCCAGTCTCTGGCCCTCCACTGTCCCCCAGACT
ACCCCGTTCCATCGGAAATAGTCCTTCCCATCACCGGCCACCTCCACTGT
ACCTTGGATCTGCAGATCCACGCCAGACATCACCACGTCCACGGCATAGC
TGCTCGACGTCATCCGCTCCTGGATGCTGATGATGCTCGTGCGACACCCG
GACTGCACGACCTTGCCGTCACGGGCCAAGTAGGCGCTTCTGATCTGCGT
GGTGGAGTTGTCGGCTCCCACTCGAGGCGTGTACTGCAGCCACACCAACG
AGTAGGATCCGATATGCACATGGCCCCAGGACCAGGTCTTGACGGTATTC
TGGAAGGGCCGATTTCCCCAATTCTGACGCTATCAGGCACAGAACCAGAA
TCAAGTGAAAGGAGAGGAGGAGGCTACCTTATCATGGTACCCATACCCCG
TAAACTGCAATTTCTCCCCATCGACCATCAAGTCCACCGTGGCATGCGAG
TCCGGCACCATACTCACCCATCCCAAGCCCTCGCCAAGCCCCAACGCACG
ATTGACCTGTTCAGGTGTCGAGCAAGGTAGAAGCGGCGGAGTAGGCTACC
ATCATTATCGTTAGGTAACCAGCATCTATCTTGTTCTCAAGAAAGGTGTA
CTCACATTACGCAACTGAATACTCC back to topCoding sequence (CDS) from alignment at ch3:1248243..1251267+ >KJC3_003212-T1 ID=KJC3_003212-T1|Name=KJC3_003212-T1|organism=Aspergillus niger KJC3|type=CDS|length=3582bp|location=Sequence derived from alignment at ch3:1248243..1251267+ (Aspergillus niger KJC3)
ATGGGGTCATCAGTGGAAATGGAATCCGTCGATCTCGTTATTGTCGGAGC
AGGATGGTCCGGCCTCTCCGCCCTCAAAACCTACCACGAGGTGCACCCCA
CCGCCCGCATCCTCCTGCTGGATAGCGCCACCACCATCGGCGGCGTCTGG
GCCGCCCACCGCCTCTACAAGGGCCTCAAATCCAACAACATGCTGGGCAC
CTACGAATACAGCGACTTCCCCATGGACAGCGCCACCTTCGGCGTGAAGC
CAGGCGAACATATCCCCGGCCACGTGCTGCACCAGTACCTCAATGCATAC
GTGGATCACTTCAACCTTCGGGATATGATCCGACTAGAGACGAAGGTGGA
GGTCGTGGAGCATGTGGATGAGGATGGGAGCTGGACGCTCACCACCTCCC
CTACTTCTTCCTCTGACATTGAGAAGAAAGACACCATCCACACGAAGAAA
CTCCTCCTCGCAACAGGAATGACCTCCCGACCCTTCCTCCCCCACTTCCC
CGGACAAGAAACCTACCCCCACACCATCACCCACACCGGCACTCTCCTCC
CCCACCAAGCCACCCTCTTCCAGAAAGATAGGAAAGTAGTCATCTACGGC
GGTACCAAATCCGCCTGGGACGCCGTGCACACCGCCGCCACGTCCGGGGC
CAACGTGACCTGGATCATCCGATCCACGGGCCACGGGCCTACCTGGATGT
CTCCGCCGTACGTGACTCCTTTGAAGAGATGGTTCGAGAAGCTGCTTACC
ACGCGACTTCTCACATGGTTCTCGCCATGTATCTGGGGCGATGCAGACGG
GTGTTCTGGAATCCGATGGTTCCTGCATTCTACCTGGTTAGGACGGAAGA
TCGTAAATGCGTTCTGGGCCGTGCTGACGAACGACCTACTAACCCTGAAC
AACTACGATGGCCACGAGGAAACGAAGAAATTGAAGCCGTGGATAAGTCC
GTTCTGGGTGGCTAGTGGACTGAGCATCTTGAACTACGAGACTGATTTCT
ATTCTCTGATCCGGGAGGGTAAGGTCCGGGTGGTGATCGATGAGATTATG
GAGCTTACGGAAGATGGCGGCATCTCTCTTGGTGATTCCGGGGAGGTGGT
GCAGAGTGAGGGGCTGATTTGTGCTACGGGCTGGGAGGCGACGCCGAATA
TGGAGTTTAGACCTGCGGAGATTGAGAGGGACTTGGGGTTCCCTTGGGCG
GAGGATTACCTGGCGACGCCGATGGTGAAGAGGGCAGATCAGGAGATCTT
GACGCGGTTCCCGAAGCTAAGGGAATCGCTCAGTGTCGGGGTCAATGCGA
AGGAGGATTATCGCCCCTTGGCGAAGGGGGCACCCGCTACGGCGAAGCAT
CCGTTCCGGTTGGTAAGGTTCATGGTGCCGGCGGCGTTTATGAAGGAGCG
GTCGGTGGCGGTGCTGGGGACGCCGATGACGGTGAATACGCCGCTGATTG
CGCAGGTGCAGGCGCTGTGGGTGGCGGCGTTTATGGGAGATGGGATGGGG
GTGAAGGCGCGGGAGACGTGTCCGGAGGAGTCGAAGAAGGGATTACTAAC
AGAAGGAGAGGTGGACGGGGACGTGGTGTGGGAGATGGCGCTGCATACGC
AATTCGGGAAATATCGGTGTCCGGGAGGGTTTGGAAAGAGGAATCTAGAT
ACCGTGTTTGATACGTTGCCGTATATTGATCTGTTGTTGCAGGATTTGGG
GCTGGATTGGCGGCGGAAGGGGAGTTTGAAGTGGTTAGAGCCGTATGGGA
TGGAGGATTATAAGGGGTTGGTGGAGGAGTGGTTGAAATGAATGGGGTCA
TCAGTGGAAATGGAATCCGTCGATCTCGTTATTGTCGGAGCAGGATGGTC
CGGCCTCTCCGCCCTCAAAACCTACCACGAGGTGCACCCCACCGCCCGCA
TCCTCCTGCTGGATAGCGCCACCACCATCGGCGGCGTCTGGGCCGCCCAC
CGCCTCTACAAGGGCCTCAAATCCAACAACATGCTGGGCACCTACGAATA
CAGCGACTTCCCCATGGACAGCGCCACCTTCGGCGTGAAGCCAGGCGAAC
ATATCCCCGGCCACGTGCTGCACCAGTACCTCAATGCATACGTGGATCAC
TTCAACCTTCGGGATATGATCCGACTAGAGACGAAGGTGGAGGTCGTGGA
GCATGTGGATGAGGATGGGAGCTGGACGCTCACCACCTCCCCTACTTCTT
CCTCTGACATTGAGAAGAAAGACACCATCCACACGAAGAAACTCCTCCTC
GCAACAGGAATGACCTCCCGACCCTTCCTCCCCCACTTCCCCGGACAAGA
AACCTACCCCCACACCATCACCCACACCGGCACTCTCCTCCCCCACCAAG
CCACCCTCTTCCAGAAAGATAGGAAAGTAGTCATCTACGGCGGTACCAAA
TCCGCCTGGGACGCCGTGCACACCGCCGCCACGTCCGGGGCCAACGTGAC
CTGGATCATCCGATCCACGGGCCACGGGCCTACCTGGATGTCTCCGCCGT
ACGTGACTCCTTTGAAGAGATGGTTCGAGAAGCTGCTTACCACGCGACTT
CTCACATGGTTCTCGCCATGTATCTGGGGCGATGCAGACGGGTGTTCTGG
AATCCGATGGTTCCTGCATTCTACCTGGTTAGGACGGAAGATCGTAAATG
CGTTCTGGGCCGTGCTGACGAACGACCTACTAACCCTGAACAACTACGAT
GGCCACGAGGAAACGAAGAAATTGAAGCCGTGGATAAGTCCGTTCTGGGT
GGCTAGTGGACTGAGCATCTTGAACTACGAGACTGATTTCTATTCTCTGA
TCCGGGAGGGTAAGGTCCGGGTGGTGATCGATGAGATTATGGAGCTTACG
GAAGATGGCGGCATCTCTCTTGGTGATTCCGGGGAGGTGGTGCAGAGTGA
GGGGCTGATTTGTGCTACGGGCTGGGAGGCGACGCCGAATATGGAGTTTA
GACCTGCGGAGATTGAGAGGGACTTGGGGTTCCCTTGGGCGGAGGATTAC
CTGGCGACGCCGATGGTGAAGAGGGCAGATCAGGAGATCTTGACGCGGTT
CCCGAAGCTAAGGGAATCGCTCAGTGTCGGGGTCAATGCGAAGGAGGATT
ATCGCCCCTTGGCGAAGGGGGCACCCGCTACGGCGAAGCATCCGTTCCGG
TTGGTAAGGTTCATGGTGCCGGCGGCGTTTATGAAGGAGCGGTCGGTGGC
GGTGCTGGGGACGCCGATGACGGTGAATACGCCGCTGATTGCGCAGGTGC
AGGCGCTGTGGGTGGCGGCGTTTATGGGAGATGGGATGGGGGTGAAGGCG
CGGGAGACGTGTCCGGAGGAGTCGAAGAAGGGATTACTAACAGAAGGAGA
GGTGGACGGGGACGTGGTGTGGGAGATGGCGCTGCATACGCAATTCGGGA
AATATCGGTGTCCGGGAGGGTTTGGAAAGAGGAATCTAGATACCGTGTTT
GATACGTTGCCGTATATTGATCTGTTGTTGCAGGATTTGGGGCTGGATTG
GCGGCGGAAGGGGAGTTTGAAGTGGTTAGAGCCGTATGGGATGGAGGATT
ATAAGGGGTTGGTGGAGGAGTGGTTGAAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003212-T1.utr5p1 | KJC3_003212-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003212-T1.utr3p1 | KJC3_003212-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF13738 |
| DBxref | PFAM:PF07992 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1248243..1251267 + |
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