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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1610927..1613686- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003316-T1 ID=KJC3_003316-T1|Name=KJC3_003316-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2760bp|location=Sequence derived from alignment at ch3:1610927..1613686- (Aspergillus niger KJC3)
TTCCCTTATACAAATCACTGTTGAAGCATCCCTGCGCGTCTAGGTCACTG
ACGGTGGTTCATAGATTGAGTACCCGCCTGAGGGACGCGTCGAGGGCCGT
TTCTCAAGGCGCATAAGGCGCGAGGTCGATATGTTCTATAGCCATGAGAG
TAAGTGAATCCAGAGCTGGACTTGCACTTCATGGGGCATTGAGGATGCAA
ATATTGAGTGATTGTGCTGATTGACTTCTCCTGATAGTTCTTACTTCTCC
TGAACATGGAGTTGCTACGGTTTGGTGAGTTGTCGCGTTCCCTTCTTAAA
TGTGTCTGCTCTATTATACTGACAATGCAATCCTCACAGGCTTGTTGCCA
CCTTGGGCTCGAAATCCGTCACAAGAAAGTTGAACAAGAAGACTATACTG
GATGTGGATGTTCCCAAGACGTGTGGTGTCATAATGGACCCGGTGGCGCC
GATGGCTTTAAGGCTTCAAGGAAATCTGCTGTAAGATCTCCTGCTCCGCG
GGGAGATGTCTGGGGATTACTTTGCTCATTGGAACGTGCTTCTCTAGGTA
TGGGGTGTCGAGGGTATACAGCCAACAGTGTGGATACACGCTCACCGATG
TCCAAGCAATGCATGACAGAATGAGAGCTCTGTTGAAGGTTCTTCCTGGA
GGGGGCCTTGACCCTACAGCAGGAAAGGCTAGGTCTGTTCTCCTGATGTC
TTATTACATGCGGACTTTGCGACGGAGTCTCGATGCTTACCATTCATATA
GACCAGATCAGCTCATTCTACCCTATGATCCGAGTTTCCTGCCTGAAAAT
AACCTCCCTGGCTTAGGACTAGATTTTTCAAGTTTGAATCTGTCGATCGA
TTTGGACCTGAGCCAACAATCAAGTCGGATGTGGCCTCAGACTCCTGATC
TTAGCCAATCTGCTCTCTCTCAGACCGCCAGCCTGAAACTGGACTTGTCT
TCTAACAGATCATTTGAGGACATAGATGGTTTTAGCGCGGTTACTAGTGT
GAGTCGGTATGGAGGGATAGGCATCGATCTTGGCGGCATCGAGTCCCTCC
AGTATGGTGAGGAATCCGGTGTGATCCTGCAACCTGACTTTGAATTCGAT
GAAGATGGAAATATCATCGAGCTTGCTGGATCCGATCAGCCTGAGACAAG
ATTGCAAGGGAACATACCAGCCATGGAAGAAAGAGCTGCAGATGACATGG
AAGTTGACGTGGTAGGAAGCATTGTCATGGAGGATCAGGTACGCCTCAGA
AATTACTTATCAATATTTCAATTGCCTGACAAGAGTACGAAATAGCTAGC
TTTGCTTGACGAAGAATTCAAAAGAGAAATATCAGGCCTAAAACCGAAAG
CCGAAAACGTTGACATGCAGAAGACCACTCACAACCGCGCCTCTATATTT
GACCAGGTAATGGAGGATGAAGATGCTGTGGAGTCGAATGCGGCATTACA
GCAAAAGAGAAGAGGCCCCAAGGTCATTGGATTAGATGACCAAATTGCAC
TGCGAAACACTGACATGGCCCAGTTGAATAATAACTATGTGCAGAACATG
GCAGCAGCCTCGAAGCAGAAGCAGAGAAACAAGCTTCCAACTTTGGCAAA
GAAAAAAGCTGCTTTCTGGGTCTTCGGTCAAGGCATTGGTTCTGTCGGTG
TAGGCGTGGGGGTGTCTCATGTCAAGCATCCATTGCATTCTTTCTCAGGG
GACCAACTATATGAAAATCTCCAAGATAAATCGAATGATCGAGTACGCAA
GCGTCTTCATTCATCCATCGAAGAAGAAGATCCCAATTTCGATACACGAC
GGATACGCCCAAGGGTGGAGGATGATAATCAGATCGGACGTCACGACGAC
AGGTTATGGAATGAGGTTTGTATAGGTCGACGTGCTCTCTATGCTTATCG
GACCAAAGCTGAAATATTGTACACAGGACGTCGAATATGGTCGCAATGCA
CCACCCTCTCTTCGCGATGACCACTCCATCCAAATGCCATGGAACATCAC
AGCATCTATTCAAAGCTCTCGACAGGGCTCGTCTGCTGCGAACATCTTTC
GCGGATTCGGCAGCGCCAGTGACTTCTCATCACATGGAGTTTCAGAGACT
GGATTTGGAAGAGCACGCAGCCGTCTCACAAGCGCAAGTCCCCTTGCTGG
CCGTGGGTTCCCTTTTGACGCTGAAGCGCTCAATGTTATCTCGATTCCTG
GAAACGAGATGGGTGAGTTAGAGAACCTTGACGACTTTGACATTTCTCAG
TATCTACACACCGAGCTTGCAACGGAGAATGGTGGAGCCTTTGACGAGGA
TCACATAATGGAAGCAGAAGACCATGGAACACACTCTGTTGTTCAGGGCC
TGCAAGTACTCAATGATGACTCACAAAAGTCAACACTTGACCAAGAGGGC
TTGAACTTCCTCAAGTACTTGGAATCCATATTCATGACCACGACACCTGC
AAATGAAGAGGCAGGCTATGACCCGAATGTTCCAGCCGCGAAAAATCGAT
CAGTGGCATTCTCCACACTTCTCCCTCCGCAGAAGACCTCTCACATCGTG
GCTACTCAGGGCTTCATGCATGTGCTTACACTTGCAACTAAAGGTATACT
TTCGGTAAAACAAGAAGCATACGAAGACCAAAGCACAGAAGAATATGGCG
TGCGATATAAGTACGGAGAGATTCACTTATGCATACCAGGATTGTAGGAG
GCTATTACAGCACAACATTGATCATTCGTTATCATACCTGTAGCTGCAGA
ATCCCCCATC back to topCoding sequence (CDS) from alignment at ch3:1610927..1613686- >KJC3_003316-T1 ID=KJC3_003316-T1|Name=KJC3_003316-T1|organism=Aspergillus niger KJC3|type=CDS|length=7608bp|location=Sequence derived from alignment at ch3:1610927..1613686- (Aspergillus niger KJC3)
GACGTCGAATATGGTCGCAATGCACCACCCTCTCTTCGCGATGACCACTC
CATCCAAATGCCATGGAACATCACAGCATCTATTCAAAGCTCTCGACAGG
GCTCGTCTGCTGCGAACATCTTTCGCGGATTCGGCAGCGCCAGTGACTTC
TCATCACATGGAGTTTCAGAGACTGGATTTGGAAGAGCACGCAGCCGTCT
CACAAGCGCAAGTCCCCTTGCTGGCCGTGGGTTCCCTTTTGACGCTGAAG
CGCTCAATGTTATCTCGATTCCTGGAAACGAGATGGGTGAGTTAGAGAAC
CTTGACGACTTTGACATTTCTCAGTATCTACACACCGAGCTTGCAACGGA
GAATGGTGGAGCCTTTGACGAGGATCACATAATGGAAGCAGAAGACCATG
GAACACACTCTGTTGTTCAGGGCCTGCAAGTACTCAATGATGACTCACAA
AAGTCAACACTTGACCAAGAGGGCTTGAACTTCCTCAAGTACTTGGAATC
CATATTCATGACCACGACACCTGCAAATGAAGAGGCAGGCTATGACCCGA
ATGTTCCAGCCGCGAAAAATCGATCAGTGGCATTCTCCACACTTCTCCCT
CCGCAGAAGACCTCTCACATCGTGGCTACTCAGGGCTTCATGCATGTGCT
TACACTTGCAACTAAAGGTATACTTTCGGTAAAACAAGAAGCATACGAAG
ACCAAAGCACAGAAGAATATGGCGTGCGATATAAGTACGGAGAGATTCAC
TTATGCATACCAGGATTGTAGCTAGCTTTGCTTGACGAAGAATTCAAAAG
AGAAATATCAGGCCTAAAACCGAAAGCCGAAAACGTTGACATGCAGAAGA
CCACTCACAACCGCGCCTCTATATTTGACCAGGTAATGGAGGATGAAGAT
GCTGTGGAGTCGAATGCGGCATTACAGCAAAAGAGAAGAGGCCCCAAGGT
CATTGGATTAGATGACCAAATTGCACTGCGAAACACTGACATGGCCCAGT
TGAATAATAACTATGTGCAGAACATGGCAGCAGCCTCGAAGCAGAAGCAG
AGAAACAAGCTTCCAACTTTGGCAAAGAAAAAAGCTGCTTTCTGGGTCTT
CGGTCAAGGCATTGGTTCTGTCGGTGTAGGCGTGGGGGTGTCTCATGTCA
AGCATCCATTGCATTCTTTCTCAGGGGACCAACTATATGAAAATCTCCAA
GATAAATCGAATGATCGAGTACGCAAGCGTCTTCATTCATCCATCGAAGA
AGAAGATCCCAATTTCGATACACGACGGATACGCCCAAGGGTGGAGGATG
ATAATCAGATCGGACGTCACGACGACAGGTTATGGAATGAGACCAGATCA
GCTCATTCTACCCTATGATCCGAGTTTCCTGCCTGAAAATAACCTCCCTG
GCTTAGGACTAGATTTTTCAAGTTTGAATCTGTCGATCGATTTGGACCTG
AGCCAACAATCAAGTCGGATGTGGCCTCAGACTCCTGATCTTAGCCAATC
TGCTCTCTCTCAGACCGCCAGCCTGAAACTGGACTTGTCTTCTAACAGAT
CATTTGAGGACATAGATGGTTTTAGCGCGGTTACTAGTGTGAGTCGGTAT
GGAGGGATAGGCATCGATCTTGGCGGCATCGAGTCCCTCCAGTATGGTGA
GGAATCCGGTGTGATCCTGCAACCTGACTTTGAATTCGATGAAGATGGAA
ATATCATCGAGCTTGCTGGATCCGATCAGCCTGAGACAAGATTGCAAGGG
AACATACCAGCCATGGAAGAAAGAGCTGCAGATGACATGGAAGTTGACGT
GGTAGGAAGCATTGTCATGGAGGATCAGATGCATGACAGAATGAGAGCTC
TGTTGAAGGTTCTTCCTGGAGGGGGCCTTGACCCTACAGCAGGAAAGGCT
AGGACGTCGAATATGGTCGCAATGCACCACCCTCTCTTCGCGATGACCAC
TCCATCCAAATGCCATGGAACATCACAGCATCTATTCAAAGCTCTCGACA
GGGCTCGTCTGCTGCGAACATCTTTCGCGGATTCGGCAGCGCCAGTGACT
TCTCATCACATGGAGTTTCAGAGACTGGATTTGGAAGAGCACGCAGCCGT
CTCACAAGCGCAAGTCCCCTTGCTGGCCGTGGGTTCCCTTTTGACGCTGA
AGCGCTCAATGTTATCTCGATTCCTGGAAACGAGATGGGTGAGTTAGAGA
ACCTTGACGACTTTGACATTTCTCAGTATCTACACACCGAGCTTGCAACG
GAGAATGGTGGAGCCTTTGACGAGGATCACATAATGGAAGCAGAAGACCA
TGGAACACACTCTGTTGTTCAGGGCCTGCAAGTACTCAATGATGACTCAC
AAAAGTCAACACTTGACCAAGAGGGCTTGAACTTCCTCAAGTACTTGGAA
TCCATATTCATGACCACGACACCTGCAAATGAAGAGGCAGGCTATGACCC
GAATGTTCCAGCCGCGAAAAATCGATCAGTGGCATTCTCCACACTTCTCC
CTCCGCAGAAGACCTCTCACATCGTGGCTACTCAGGGCTTCATGCATGTG
CTTACACTTGCAACTAAAGGTATACTTTCGGTAAAACAAGAAGCATACGA
AGACCAAAGCACAGAAGAATATGGCGTGCGATATAAGTACGGAGAGATTC
ACTTATGCATACCAGGATTGTAGCTAGCTTTGCTTGACGAAGAATTCAAA
AGAGAAATATCAGGCCTAAAACCGAAAGCCGAAAACGTTGACATGCAGAA
GACCACTCACAACCGCGCCTCTATATTTGACCAGGTAATGGAGGATGAAG
ATGCTGTGGAGTCGAATGCGGCATTACAGCAAAAGAGAAGAGGCCCCAAG
GTCATTGGATTAGATGACCAAATTGCACTGCGAAACACTGACATGGCCCA
GTTGAATAATAACTATGTGCAGAACATGGCAGCAGCCTCGAAGCAGAAGC
AGAGAAACAAGCTTCCAACTTTGGCAAAGAAAAAAGCTGCTTTCTGGGTC
TTCGGTCAAGGCATTGGTTCTGTCGGTGTAGGCGTGGGGGTGTCTCATGT
CAAGCATCCATTGCATTCTTTCTCAGGGGACCAACTATATGAAAATCTCC
AAGATAAATCGAATGATCGAGTACGCAAGCGTCTTCATTCATCCATCGAA
GAAGAAGATCCCAATTTCGATACACGACGGATACGCCCAAGGGTGGAGGA
TGATAATCAGATCGGACGTCACGACGACAGGTTATGGAATGAGACCAGAT
CAGCTCATTCTACCCTATGATCCGAGTTTCCTGCCTGAAAATAACCTCCC
TGGCTTAGGACTAGATTTTTCAAGTTTGAATCTGTCGATCGATTTGGACC
TGAGCCAACAATCAAGTCGGATGTGGCCTCAGACTCCTGATCTTAGCCAA
TCTGCTCTCTCTCAGACCGCCAGCCTGAAACTGGACTTGTCTTCTAACAG
ATCATTTGAGGACATAGATGGTTTTAGCGCGGTTACTAGTGTGAGTCGGT
ATGGAGGGATAGGCATCGATCTTGGCGGCATCGAGTCCCTCCAGTATGGT
GAGGAATCCGGTGTGATCCTGCAACCTGACTTTGAATTCGATGAAGATGG
AAATATCATCGAGCTTGCTGGATCCGATCAGCCTGAGACAAGATTGCAAG
GGAACATACCAGCCATGGAAGAAAGAGCTGCAGATGACATGGAAGTTGAC
GTGGTAGGAAGCATTGTCATGGAGGATCAGATGCATGACAGAATGAGAGC
TCTGTTGAAGGTTCTTCCTGGAGGGGGCCTTGACCCTACAGCAGGAAAGG
CTAGGACGTCGAATATGGTCGCAATGCACCACCCTCTCTTCGCGATGACC
ACTCCATCCAAATGCCATGGAACATCACAGCATCTATTCAAAGCTCTCGA
CAGGGCTCGTCTGCTGCGAACATCTTTCGCGGATTCGGCAGCGCCAGTGA
CTTCTCATCACATGGAGTTTCAGAGACTGGATTTGGAAGAGCACGCAGCC
GTCTCACAAGCGCAAGTCCCCTTGCTGGCCGTGGGTTCCCTTTTGACGCT
GAAGCGCTCAATGTTATCTCGATTCCTGGAAACGAGATGGGTGAGTTAGA
GAACCTTGACGACTTTGACATTTCTCAGTATCTACACACCGAGCTTGCAA
CGGAGAATGGTGGAGCCTTTGACGAGGATCACATAATGGAAGCAGAAGAC
CATGGAACACACTCTGTTGTTCAGGGCCTGCAAGTACTCAATGATGACTC
ACAAAAGTCAACACTTGACCAAGAGGGCTTGAACTTCCTCAAGTACTTGG
AATCCATATTCATGACCACGACACCTGCAAATGAAGAGGCAGGCTATGAC
CCGAATGTTCCAGCCGCGAAAAATCGATCAGTGGCATTCTCCACACTTCT
CCCTCCGCAGAAGACCTCTCACATCGTGGCTACTCAGGGCTTCATGCATG
TGCTTACACTTGCAACTAAAGGTATACTTTCGGTAAAACAAGAAGCATAC
GAAGACCAAAGCACAGAAGAATATGGCGTGCGATATAAGTACGGAGAGAT
TCACTTATGCATACCAGGATTGTAGCTAGCTTTGCTTGACGAAGAATTCA
AAAGAGAAATATCAGGCCTAAAACCGAAAGCCGAAAACGTTGACATGCAG
AAGACCACTCACAACCGCGCCTCTATATTTGACCAGGTAATGGAGGATGA
AGATGCTGTGGAGTCGAATGCGGCATTACAGCAAAAGAGAAGAGGCCCCA
AGGTCATTGGATTAGATGACCAAATTGCACTGCGAAACACTGACATGGCC
CAGTTGAATAATAACTATGTGCAGAACATGGCAGCAGCCTCGAAGCAGAA
GCAGAGAAACAAGCTTCCAACTTTGGCAAAGAAAAAAGCTGCTTTCTGGG
TCTTCGGTCAAGGCATTGGTTCTGTCGGTGTAGGCGTGGGGGTGTCTCAT
GTCAAGCATCCATTGCATTCTTTCTCAGGGGACCAACTATATGAAAATCT
CCAAGATAAATCGAATGATCGAGTACGCAAGCGTCTTCATTCATCCATCG
AAGAAGAAGATCCCAATTTCGATACACGACGGATACGCCCAAGGGTGGAG
GATGATAATCAGATCGGACGTCACGACGACAGGTTATGGAATGAGACCAG
ATCAGCTCATTCTACCCTATGATCCGAGTTTCCTGCCTGAAAATAACCTC
CCTGGCTTAGGACTAGATTTTTCAAGTTTGAATCTGTCGATCGATTTGGA
CCTGAGCCAACAATCAAGTCGGATGTGGCCTCAGACTCCTGATCTTAGCC
AATCTGCTCTCTCTCAGACCGCCAGCCTGAAACTGGACTTGTCTTCTAAC
AGATCATTTGAGGACATAGATGGTTTTAGCGCGGTTACTAGTGTGAGTCG
GTATGGAGGGATAGGCATCGATCTTGGCGGCATCGAGTCCCTCCAGTATG
GTGAGGAATCCGGTGTGATCCTGCAACCTGACTTTGAATTCGATGAAGAT
GGAAATATCATCGAGCTTGCTGGATCCGATCAGCCTGAGACAAGATTGCA
AGGGAACATACCAGCCATGGAAGAAAGAGCTGCAGATGACATGGAAGTTG
ACGTGGTAGGAAGCATTGTCATGGAGGATCAGATGCATGACAGAATGAGA
GCTCTGTTGAAGGTTCTTCCTGGAGGGGGCCTTGACCCTACAGCAGGAAA
GGCTAGGACGTCGAATATGGTCGCAATGCACCACCCTCTCTTCGCGATGA
CCACTCCATCCAAATGCCATGGAACATCACAGCATCTATTCAAAGCTCTC
GACAGGGCTCGTCTGCTGCGAACATCTTTCGCGGATTCGGCAGCGCCAGT
GACTTCTCATCACATGGAGTTTCAGAGACTGGATTTGGAAGAGCACGCAG
CCGTCTCACAAGCGCAAGTCCCCTTGCTGGCCGTGGGTTCCCTTTTGACG
CTGAAGCGCTCAATGTTATCTCGATTCCTGGAAACGAGATGGGTGAGTTA
GAGAACCTTGACGACTTTGACATTTCTCAGTATCTACACACCGAGCTTGC
AACGGAGAATGGTGGAGCCTTTGACGAGGATCACATAATGGAAGCAGAAG
ACCATGGAACACACTCTGTTGTTCAGGGCCTGCAAGTACTCAATGATGAC
TCACAAAAGTCAACACTTGACCAAGAGGGCTTGAACTTCCTCAAGTACTT
GGAATCCATATTCATGACCACGACACCTGCAAATGAAGAGGCAGGCTATG
ACCCGAATGTTCCAGCCGCGAAAAATCGATCAGTGGCATTCTCCACACTT
CTCCCTCCGCAGAAGACCTCTCACATCGTGGCTACTCAGGGCTTCATGCA
TGTGCTTACACTTGCAACTAAAGGTATACTTTCGGTAAAACAAGAAGCAT
ACGAAGACCAAAGCACAGAAGAATATGGCGTGCGATATAAGTACGGAGAG
ATTCACTTATGCATACCAGGATTGTAGCTAGCTTTGCTTGACGAAGAATT
CAAAAGAGAAATATCAGGCCTAAAACCGAAAGCCGAAAACGTTGACATGC
AGAAGACCACTCACAACCGCGCCTCTATATTTGACCAGGTAATGGAGGAT
GAAGATGCTGTGGAGTCGAATGCGGCATTACAGCAAAAGAGAAGAGGCCC
CAAGGTCATTGGATTAGATGACCAAATTGCACTGCGAAACACTGACATGG
CCCAGTTGAATAATAACTATGTGCAGAACATGGCAGCAGCCTCGAAGCAG
AAGCAGAGAAACAAGCTTCCAACTTTGGCAAAGAAAAAAGCTGCTTTCTG
GGTCTTCGGTCAAGGCATTGGTTCTGTCGGTGTAGGCGTGGGGGTGTCTC
ATGTCAAGCATCCATTGCATTCTTTCTCAGGGGACCAACTATATGAAAAT
CTCCAAGATAAATCGAATGATCGAGTACGCAAGCGTCTTCATTCATCCAT
CGAAGAAGAAGATCCCAATTTCGATACACGACGGATACGCCCAAGGGTGG
AGGATGATAATCAGATCGGACGTCACGACGACAGGTTATGGAATGAGACC
AGATCAGCTCATTCTACCCTATGATCCGAGTTTCCTGCCTGAAAATAACC
TCCCTGGCTTAGGACTAGATTTTTCAAGTTTGAATCTGTCGATCGATTTG
GACCTGAGCCAACAATCAAGTCGGATGTGGCCTCAGACTCCTGATCTTAG
CCAATCTGCTCTCTCTCAGACCGCCAGCCTGAAACTGGACTTGTCTTCTA
ACAGATCATTTGAGGACATAGATGGTTTTAGCGCGGTTACTAGTGTGAGT
CGGTATGGAGGGATAGGCATCGATCTTGGCGGCATCGAGTCCCTCCAGTA
TGGTGAGGAATCCGGTGTGATCCTGCAACCTGACTTTGAATTCGATGAAG
ATGGAAATATCATCGAGCTTGCTGGATCCGATCAGCCTGAGACAAGATTG
CAAGGGAACATACCAGCCATGGAAGAAAGAGCTGCAGATGACATGGAAGT
TGACGTGGTAGGAAGCATTGTCATGGAGGATCAGATGCATGACAGAATGA
GAGCTCTGTTGAAGGTTCTTCCTGGAGGGGGCCTTGACCCTACAGCAGGA
AAGGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003316-T1.utr3p1 | KJC3_003316-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006909 |
| DBxref | PFAM:PF04824 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1610927..1613686 - |
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