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KJC3_003387-T1, KJC3_003387-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003387-T1
Unique NameKJC3_003387-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1794718..1796020-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003387-T1 ID=KJC3_003387-T1|Name=KJC3_003387-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1303bp|location=Sequence derived from alignment at ch3:1794718..1796020- (Aspergillus niger KJC3)
GCCTCGACGATTACTTTCTATTGTCATTGATTTCAAAGCAATTCACGGTG
GGTACCTTCGTATACGGGTCTCCACCGTTAATATTTATAGTCGACCATCC
GGCACTTGACGAAGAGACAGAAAATCAGAAAGGGGCAACAGGGCTTGTGT
TGAAATTAGTTGTTTATATACTTCCTTTACCATGGCATCCTATCTGATTA
CAGGTGCTTCGCGTGGCATTGGTCTCGCCATGGCTCGTACACTGGCTTCC
AAACCCGCCAACGAAGTCTCTGTCATCTTTGCCGCAGCACGCACCCAAAC
CGATGATCTAAAGCGACTAGTTGCGCAGTCTTCCGGACGCATCCATCCTG
TTTCTATGGATGTTGAAAGCAAGAATAGTATACAGGCAGCAGTTGCGACC
GTTGAACATGCATTGTCGGGGAAGGGCCTCGACGTCCTAATCAACAATGC
GGGGATAATGCCCTCTACCCGGGGTGGTATTGAAAATATGTGAGCTGTGA
TTGTCATGCTTTTATCAAATGCACCATTAACGCTTGGTAGGGATAACCTG
GACACCGTCTTCCATACCAACGTTAGCAGTGCCCATATGGTGACAAGTGC
CTTCTTACCACTCCTCAAGAACGGAAACCAGAAGAAAGTGATCAACATGT
ATGTATTTATCTGTTTGGCCAGACTTGGCTTATTATGGTTCTGACGCAAA
TCAGATCAACAACACTTGGCTCGATCACGATGGCACCCCGATTCGCACTA
TTTCCAGTGCCAGCTTACAAAGTTAGCAAAGCGGCACTCAATATGCTAAC
TGTGCAATATGCGCAGTCTTTTGCGGATCAAGGCTTCACATTTCTTGCAA
TCTCACCAGGTGTACGTTTTCTATCCGTGTTTCTTGACGCATTCATGTAG
CTAACCGCTTCGGAAGTGGGTGAAGACAGACCTTGGGGGTGACGGGGCAG
ATATAACAGCCGAACAGAGTGTGCAAGGTCTATTGGATATTATAGTTCCG
GCAACACATGCAGATAACGGGAAGTTCTTCAATATTCGCGTTCCAGGATG
GGAGAAGGCAGAGGGTTTAAACCAATATGATGGGGCAGAGGTGCCGTGGT
AAGCCATGAGGGAGTTCCCTGCCTACAGGCAGTAATGTTGTTCTCCTCAA
TTCATATATATATTGCTGGTTGGTACGCTTGCGGTCGCGTGGAAGTATTT
TCTGTTTCGGAGAAGCACAGTGTCAATAGCATTATATAATGGCATGGCGT
TACATAACGCCTCCATATGATATCATCGTTACTACTTGAGCACAACAAAA
CCA
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Coding sequence (CDS) from alignment at ch3:1794718..1796020-

>KJC3_003387-T1 ID=KJC3_003387-T1|Name=KJC3_003387-T1|organism=Aspergillus niger KJC3|type=CDS|length=3036bp|location=Sequence derived from alignment at ch3:1794718..1796020- (Aspergillus niger KJC3)
TGGGTGAAGACAGACCTTGGGGGTGACGGGGCAGATATAACAGCCGAACA
GAGTGTGCAAGGTCTATTGGATATTATAGTTCCGGCAACACATGCAGATA
ACGGGAAGTTCTTCAATATTCGCGTTCCAGGATGGGAGAAGGCAGAGGGT
TTAAACCAATATGATGGGGCAGAGGTGCCGTGGTAAATCAACAACACTTG
GCTCGATCACGATGGCACCCCGATTCGCACTATTTCCAGTGCCAGCTTAC
AAAGTTAGCAAAGCGGCACTCAATATGCTAACTGTGCAATATGCGCAGTC
TTTTGCGGATCAAGGCTTCACATTTCTTGCAATCTCACCAGGTGGATAAC
CTGGACACCGTCTTCCATACCAACGTTAGCAGTGCCCATATGGTGACAAG
TGCCTTCTTACCACTCCTCAAGAACGGAAACCAGAAGAAAGTGATCAACA
TATGGCATCCTATCTGATTACAGGTGCTTCGCGTGGCATTGGTCTCGCCA
TGGCTCGTACACTGGCTTCCAAACCCGCCAACGAAGTCTCTGTCATCTTT
GCCGCAGCACGCACCCAAACCGATGATCTAAAGCGACTAGTTGCGCAGTC
TTCCGGACGCATCCATCCTGTTTCTATGGATGTTGAAAGCAAGAATAGTA
TACAGGCAGCAGTTGCGACCGTTGAACATGCATTGTCGGGGAAGGGCCTC
GACGTCCTAATCAACAATGCGGGGATAATGCCCTCTACCCGGGGTGGTAT
TGAAAATATTGGGTGAAGACAGACCTTGGGGGTGACGGGGCAGATATAAC
AGCCGAACAGAGTGTGCAAGGTCTATTGGATATTATAGTTCCGGCAACAC
ATGCAGATAACGGGAAGTTCTTCAATATTCGCGTTCCAGGATGGGAGAAG
GCAGAGGGTTTAAACCAATATGATGGGGCAGAGGTGCCGTGGTAAATCAA
CAACACTTGGCTCGATCACGATGGCACCCCGATTCGCACTATTTCCAGTG
CCAGCTTACAAAGTTAGCAAAGCGGCACTCAATATGCTAACTGTGCAATA
TGCGCAGTCTTTTGCGGATCAAGGCTTCACATTTCTTGCAATCTCACCAG
GTGGATAACCTGGACACCGTCTTCCATACCAACGTTAGCAGTGCCCATAT
GGTGACAAGTGCCTTCTTACCACTCCTCAAGAACGGAAACCAGAAGAAAG
TGATCAACATATGGCATCCTATCTGATTACAGGTGCTTCGCGTGGCATTG
GTCTCGCCATGGCTCGTACACTGGCTTCCAAACCCGCCAACGAAGTCTCT
GTCATCTTTGCCGCAGCACGCACCCAAACCGATGATCTAAAGCGACTAGT
TGCGCAGTCTTCCGGACGCATCCATCCTGTTTCTATGGATGTTGAAAGCA
AGAATAGTATACAGGCAGCAGTTGCGACCGTTGAACATGCATTGTCGGGG
AAGGGCCTCGACGTCCTAATCAACAATGCGGGGATAATGCCCTCTACCCG
GGGTGGTATTGAAAATATTGGGTGAAGACAGACCTTGGGGGTGACGGGGC
AGATATAACAGCCGAACAGAGTGTGCAAGGTCTATTGGATATTATAGTTC
CGGCAACACATGCAGATAACGGGAAGTTCTTCAATATTCGCGTTCCAGGA
TGGGAGAAGGCAGAGGGTTTAAACCAATATGATGGGGCAGAGGTGCCGTG
GTAAATCAACAACACTTGGCTCGATCACGATGGCACCCCGATTCGCACTA
TTTCCAGTGCCAGCTTACAAAGTTAGCAAAGCGGCACTCAATATGCTAAC
TGTGCAATATGCGCAGTCTTTTGCGGATCAAGGCTTCACATTTCTTGCAA
TCTCACCAGGTGGATAACCTGGACACCGTCTTCCATACCAACGTTAGCAG
TGCCCATATGGTGACAAGTGCCTTCTTACCACTCCTCAAGAACGGAAACC
AGAAGAAAGTGATCAACATATGGCATCCTATCTGATTACAGGTGCTTCGC
GTGGCATTGGTCTCGCCATGGCTCGTACACTGGCTTCCAAACCCGCCAAC
GAAGTCTCTGTCATCTTTGCCGCAGCACGCACCCAAACCGATGATCTAAA
GCGACTAGTTGCGCAGTCTTCCGGACGCATCCATCCTGTTTCTATGGATG
TTGAAAGCAAGAATAGTATACAGGCAGCAGTTGCGACCGTTGAACATGCA
TTGTCGGGGAAGGGCCTCGACGTCCTAATCAACAATGCGGGGATAATGCC
CTCTACCCGGGGTGGTATTGAAAATATTGGGTGAAGACAGACCTTGGGGG
TGACGGGGCAGATATAACAGCCGAACAGAGTGTGCAAGGTCTATTGGATA
TTATAGTTCCGGCAACACATGCAGATAACGGGAAGTTCTTCAATATTCGC
GTTCCAGGATGGGAGAAGGCAGAGGGTTTAAACCAATATGATGGGGCAGA
GGTGCCGTGGTAAATCAACAACACTTGGCTCGATCACGATGGCACCCCGA
TTCGCACTATTTCCAGTGCCAGCTTACAAAGTTAGCAAAGCGGCACTCAA
TATGCTAACTGTGCAATATGCGCAGTCTTTTGCGGATCAAGGCTTCACAT
TTCTTGCAATCTCACCAGGTGGATAACCTGGACACCGTCTTCCATACCAA
CGTTAGCAGTGCCCATATGGTGACAAGTGCCTTCTTACCACTCCTCAAGA
ACGGAAACCAGAAGAAAGTGATCAACATATGGCATCCTATCTGATTACAG
GTGCTTCGCGTGGCATTGGTCTCGCCATGGCTCGTACACTGGCTTCCAAA
CCCGCCAACGAAGTCTCTGTCATCTTTGCCGCAGCACGCACCCAAACCGA
TGATCTAAAGCGACTAGTTGCGCAGTCTTCCGGACGCATCCATCCTGTTT
CTATGGATGTTGAAAGCAAGAATAGTATACAGGCAGCAGTTGCGACCGTT
GAACATGCATTGTCGGGGAAGGGCCTCGACGTCCTAATCAACAATGCGGG
GATAATGCCCTCTACCCGGGGTGGTATTGAAAATAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003387KJC3_003387Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003387-T1KJC3_003387-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003387-T1.cdsKJC3_003387-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003387-T1.utr3p1KJC3_003387-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003387-T1.exon4KJC3_003387-T1.exon4Aspergillus niger KJC3exon
KJC3_003387-T1.exon3KJC3_003387-T1.exon3Aspergillus niger KJC3exon
KJC3_003387-T1.exon2KJC3_003387-T1.exon2Aspergillus niger KJC3exon
KJC3_003387-T1.exon1KJC3_003387-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003387-T1.utr5p1KJC3_003387-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1794718..1796020 -
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