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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1884669..1885439- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003423-T1 ID=KJC3_003423-T1|Name=KJC3_003423-T1|organism=Aspergillus niger KJC3|type=mRNA|length=771bp|location=Sequence derived from alignment at ch3:1884669..1885439- (Aspergillus niger KJC3)
CTACGAAGTGGTTGAGGGGCATTTCGAATTTCCGGGAATAAATAGATAGC
ACTACTAGATACATAGGTCTCTTTCTCTTCTATCATCATACTAGATAATC
TCACAGCTTAGCAAGATGCAGGTCACTCACATTGTCCTACTCCAATTCAA
CCCCGACGTTACTCCCGAGGTTAGGGAGAATGTGCGTTTGTCCTACACCT
CTTACCACACCTTATACCGCCAGATCCTAGACATCTAACTCGATCCTCGT
ATAGGTCGCAGCCCAGGTCAGGGACCTGCGCGAATCATGCATCCACCCGG
AAACTGGCAAGCCGTACATCGTTTCCATGAAGGCCGGCGCTGATGTCTCG
ATCGAGGGGCTGCAGGTGCGTTTACTTCCTAGCTTCTGATCCTATGACTG
GTAAACATAACTTCTAACCTTGTCTGAATAGAACGGCATCAGCCATGCAT
TCGTCTCCGTTTTCGAAAACACCGCGGATCGCGACTACTTTGTGAACAAG
GATCCGGCGCACATTGCGCTTGTGCAGAATGTCAAGCATTATCTGGCTAA
GGTTCAGGTCGTGGATTTTGTTGATGGGAAGCTTGTTTAAGTGTATTCTA
TTGTTGTTTCGATGGTTCGATGGCTTTGAGTCGTACTATACAAAGTTTGT
GCAGGAGTAATCGGTGTAGTTACTATCGAGATCAGCGCCATGTACAAGCA
AGAATATATATAAACCTGGTGAGGTATAGTGGGTCGAAACGGGCAAAACA
AAATGCGAGTGAATTAGCAGG back to topCoding sequence (CDS) from alignment at ch3:1884669..1885439- >KJC3_003423-T1 ID=KJC3_003423-T1|Name=KJC3_003423-T1|organism=Aspergillus niger KJC3|type=CDS|length=1008bp|location=Sequence derived from alignment at ch3:1884669..1885439- (Aspergillus niger KJC3)
AACGGCATCAGCCATGCATTCGTCTCCGTTTTCGAAAACACCGCGGATCG
CGACTACTTTGTGAACAAGGATCCGGCGCACATTGCGCTTGTGCAGAATG
TCAAGCATTATCTGGCTAAGGTTCAGGTCGTGGATTTTGTTGATGGGAAG
CTTGTTTAAGTCGCAGCCCAGGTCAGGGACCTGCGCGAATCATGCATCCA
CCCGGAAACTGGCAAGCCGTACATCGTTTCCATGAAGGCCGGCGCTGATG
TCTCGATCGAGGGGCTGCAGATGCAGGTCACTCACATTGTCCTACTCCAA
TTCAACCCCGACGTTACTCCCGAGGTTAGGGAGAATAACGGCATCAGCCA
TGCATTCGTCTCCGTTTTCGAAAACACCGCGGATCGCGACTACTTTGTGA
ACAAGGATCCGGCGCACATTGCGCTTGTGCAGAATGTCAAGCATTATCTG
GCTAAGGTTCAGGTCGTGGATTTTGTTGATGGGAAGCTTGTTTAAGTCGC
AGCCCAGGTCAGGGACCTGCGCGAATCATGCATCCACCCGGAAACTGGCA
AGCCGTACATCGTTTCCATGAAGGCCGGCGCTGATGTCTCGATCGAGGGG
CTGCAGATGCAGGTCACTCACATTGTCCTACTCCAATTCAACCCCGACGT
TACTCCCGAGGTTAGGGAGAATAACGGCATCAGCCATGCATTCGTCTCCG
TTTTCGAAAACACCGCGGATCGCGACTACTTTGTGAACAAGGATCCGGCG
CACATTGCGCTTGTGCAGAATGTCAAGCATTATCTGGCTAAGGTTCAGGT
CGTGGATTTTGTTGATGGGAAGCTTGTTTAAGTCGCAGCCCAGGTCAGGG
ACCTGCGCGAATCATGCATCCACCCGGAAACTGGCAAGCCGTACATCGTT
TCCATGAAGGCCGGCGCTGATGTCTCGATCGAGGGGCTGCAGATGCAGGT
CACTCACATTGTCCTACTCCAATTCAACCCCGACGTTACTCCCGAGGTTA
GGGAGAAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003423-T1.utr3p1 | KJC3_003423-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003423-T1.utr5p1 | KJC3_003423-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011008 |
| DBxref | InterPro:IPR013097 |
| DBxref | PFAM:PF07876 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1884669..1885439 - |
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