|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1980887..1983352+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003467-T1 ID=KJC3_003467-T1|Name=KJC3_003467-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2466bp|location=Sequence derived from alignment at ch3:1980887..1983352+ (Aspergillus niger KJC3)
CTTTGCTGACCCTGCTTGTCATCTGCACCTCAAGTTCAGACCATCCCTAT
CTTCCTTGCAAGTCCCCTTCCTCCTCCCTCCGAGGAATCCTCTGCAGATA
TGGCGGACTTTGGCCCTCGTGCTCCTCACGGACCCGACATGAACGGCAAG
CAGGATTTTGCTGAGATGCACCCCAATGAAAAGGAGGGCTTCGATCGCCT
CCTTCGTCCCGATGACAGCTACACGGCAGAGGGTGTCTACTGGGCCGATC
TGCCCATTGGGCAGCGTGTCAAGTTCGTCACCTCGGTCGACAACAAGGAA
CGTAGCCGTCAATGGTCGGCTCTCTGGGCCGAGATCAAGCAGGACCCCCT
CTCTCCAATGATGAATTACTTCCGCAACACCATCATTCCCGGTGCTGGTA
TTGGTCTGGAAGGGTATGTTTACCCCATTCCAATTGGTCTGCATATAGTC
CTTTCTAACAGATCTGTCACAGTTACGTCCTCCTGTCCATCGGAAACATC
TCCACCCTCTTCCAACACTCCTTCTCAGCTTGCTGGGACAAGTACGAACT
CTGTAACAAGCAGTGGATCAACGCCATTACCTACCTTGAAATCGTCGGTA
TCATTATCGGCCAGGTCCTCGTTGGTGTCATTGGTGACTGGGTGGGCCGT
CGTTGGGGTTTGCTACAGGATGCCTGGATCATGTTCTTGGGTCTGGTCAT
GTTGACCTGCGCCTGGGGTGTCACACAAAACGGCTGGGTCATCTGCTATG
CTTGGTCGCTTTTCATCTACGGTATCGGTGTTGGTAAGTTATAACCTTCC
GCTTTGCATTGGCGGCACGAAGCCCTCCTCTCGAAAGCCGATCGGCTGAC
TCTTCTCAGGTGGTGAGTACCCGATGACGGCCACCAGCGGTATGGAGAAC
GCTGTTGGTTCCGGCAAGCTCTCTACTCGCGAGGATCGTCTTCACCGTGG
TTCCAAGGTTGTTGGTGTCTTCTCCATGCAGGGTTGGGGACAAGTCCTTA
ACCAGGCCATCCTCATGATCTTGCTTCTTATCTTCAACGCTGGTAGCGGA
GAGGAGCCGATCAGCGAGACCAACACCCAATGGACCTACCGTATCTCCTT
CGTCATCCCCATGGTTGGTACTTTCTGGCTGATCTACTACCGTGCATACC
ACATGAAGGCCGCCAGTAAGCAGCTGGCAGCCACCAAGAAGAAGAACTCG
GTCACTGGTTACGACACCGAGTCTCTCCGCCTCACTTTCAAGTACTTTAC
TCCTCGTGTTATGGCCACTGCTGGTGGATGGTTCGCCAACGACGTTTTCT
TCTACGGTGCCAAGCTCTTCTCCAGTGACTTTATCAAGGTCATCAGCCCC
AACACCAAGTCTATCTTCGTTACCTGGCAGTGGAGTTTCATCAACTGCGT
TGTCACCCTGATGGGCTACTATGCTGCCATTATGTTCGTGGACAACAAGC
TCTACGGCCGCAAGTGGATGCAAATCATGGGCTTCTTGCTCTGCTTCATC
GTGTACGTGGTGCCTGCCTTCCACTACCACTACTACACCGAAGCCGCCCA
CATCCACTCCTTCCAGGCCATGTACTTCCTGGGCAGTTTCTTCAACCAAT
TCGGTCCCAACTGCATCACCTTCCTGGTCGCTGGTGAAGTCTTCCCCACC
CCTATCCGTGCCACCGCCCACGGTATCTCTGCTGCCTGCGGTAAGCTGGG
AGCCCTGTTGGCTGCTATCCTCTTCAACTACATCGACACTCAGACCAAGT
TCTACTTTGTGCCCTGGTGGGGTATCTTCGGCATGTTCCTGACCTTCTTC
TTCCTTCCGGATACCACCGGTCTGGATCTCAAGGAGCAGGAGCGCCGCTG
GAGATTCATCCGCGAGGGTCGTGAGCACGAGTACCACGGTGTTGCTATTC
ACCCCAAGCACCTGTCCTTGTGGGAGCGCTTCCGTGGCGTCGGCAAGTAC
TACGACCCCGAGCTGGACTACCAGCAGCGCGTTGAGGAGTACCGCACTGA
GTGGGAGGCCATCATGGCTCGCCGCAGCGAAGAGACCAAGAACGGCGACG
ATGTCGATTTGGCCTTCGTCGAGGATGACATCTTGGAGGGTTCCGTCCAC
AACTACTTCCACCGCACCAGCTCGTTCACCAAGAGCCAGAGCGTGGAGAA
GGTCACTGAGGCTGAGCCCTCGGAGTAAAAAAGTCACCGCAGCATCTAAT
TTTGCACCATGCTCTCATCGGCATGGAATGGATATACCCCACACATACCC
CCCTCATATATACCCGTCGCTCATCCGATTTCACAGTACCAGTTGGATAG
AGATCTCTTCTGGCTTATTTTATACTTCCTAATTTCCTGTTTATATACAT
TCGATGTCTAAATGGTTGAACGAGGAGCTGAGACATGTTTTTACTGTACC
TAATTCAATACAACTCGGCTCCATACCTGTTGTAACTAAAATGTCTATAG
TCATGTTTAAATCCAT back to topCoding sequence (CDS) from alignment at ch3:1980887..1983352+ >KJC3_003467-T1 ID=KJC3_003467-T1|Name=KJC3_003467-T1|organism=Aspergillus niger KJC3|type=CDS|length=5832bp|location=Sequence derived from alignment at ch3:1980887..1983352+ (Aspergillus niger KJC3)
ATGGCGGACTTTGGCCCTCGTGCTCCTCACGGACCCGACATGAACGGCAA
GCAGGATTTTGCTGAGATGCACCCCAATGAAAAGGAGGGCTTCGATCGCC
TCCTTCGTCCCGATGACAGCTACACGGCAGAGGGTGTCTACTGGGCCGAT
CTGCCCATTGGGCAGCGTGTCAAGTTCGTCACCTCGGTCGACAACAAGGA
ACGTAGCCGTCAATGGTCGGCTCTCTGGGCCGAGATCAAGCAGGACCCCC
TCTCTCCAATGATGAATTACTTCCGCAACACCATCATTCCCGGTGCTGGT
ATTGGTCTGGAAGGTTACGTCCTCCTGTCCATCGGAAACATCTCCACCCT
CTTCCAACACTCCTTCTCAGCTTGCTGGGACAAGTACGAACTCTGTAACA
AGCAGTGGATCAACGCCATTACCTACCTTGAAATCGTCGGTATCATTATC
GGCCAGGTCCTCGTTGGTGTCATTGGTGACTGGGTGGGCCGTCGTTGGGG
TTTGCTACAGGATGCCTGGATCATGTTCTTGGGTCTGGTCATGTTGACCT
GCGCCTGGGGTGTCACACAAAACGGCTGGGTCATCTGCTATGCTTGGTCG
CTTTTCATCTACGGTATCGGTGTTGGTGGTGAGTACCCGATGACGGCCAC
CAGCGGTATGGAGAACGCTGTTGGTTCCGGCAAGCTCTCTACTCGCGAGG
ATCGTCTTCACCGTGGTTCCAAGGTTGTTGGTGTCTTCTCCATGCAGGGT
TGGGGACAAGTCCTTAACCAGGCCATCCTCATGATCTTGCTTCTTATCTT
CAACGCTGGTAGCGGAGAGGAGCCGATCAGCGAGACCAACACCCAATGGA
CCTACCGTATCTCCTTCGTCATCCCCATGGTTGGTACTTTCTGGCTGATC
TACTACCGTGCATACCACATGAAGGCCGCCAGTAAGCAGCTGGCAGCCAC
CAAGAAGAAGAACTCGGTCACTGGTTACGACACCGAGTCTCTCCGCCTCA
CTTTCAAGTACTTTACTCCTCGTGTTATGGCCACTGCTGGTGGATGGTTC
GCCAACGACGTTTTCTTCTACGGTGCCAAGCTCTTCTCCAGTGACTTTAT
CAAGGTCATCAGCCCCAACACCAAGTCTATCTTCGTTACCTGGCAGTGGA
GTTTCATCAACTGCGTTGTCACCCTGATGGGCTACTATGCTGCCATTATG
TTCGTGGACAACAAGCTCTACGGCCGCAAGTGGATGCAAATCATGGGCTT
CTTGCTCTGCTTCATCGTGTACGTGGTGCCTGCCTTCCACTACCACTACT
ACACCGAAGCCGCCCACATCCACTCCTTCCAGGCCATGTACTTCCTGGGC
AGTTTCTTCAACCAATTCGGTCCCAACTGCATCACCTTCCTGGTCGCTGG
TGAAGTCTTCCCCACCCCTATCCGTGCCACCGCCCACGGTATCTCTGCTG
CCTGCGGTAAGCTGGGAGCCCTGTTGGCTGCTATCCTCTTCAACTACATC
GACACTCAGACCAAGTTCTACTTTGTGCCCTGGTGGGGTATCTTCGGCAT
GTTCCTGACCTTCTTCTTCCTTCCGGATACCACCGGTCTGGATCTCAAGG
AGCAGGAGCGCCGCTGGAGATTCATCCGCGAGGGTCGTGAGCACGAGTAC
CACGGTGTTGCTATTCACCCCAAGCACCTGTCCTTGTGGGAGCGCTTCCG
TGGCGTCGGCAAGTACTACGACCCCGAGCTGGACTACCAGCAGCGCGTTG
AGGAGTACCGCACTGAGTGGGAGGCCATCATGGCTCGCCGCAGCGAAGAG
ACCAAGAACGGCGACGATGTCGATTTGGCCTTCGTCGAGGATGACATCTT
GGAGGGTTCCGTCCACAACTACTTCCACCGCACCAGCTCGTTCACCAAGA
GCCAGAGCGTGGAGAAGGTCACTGAGGCTGAGCCCTCGGAGTAAATGGCG
GACTTTGGCCCTCGTGCTCCTCACGGACCCGACATGAACGGCAAGCAGGA
TTTTGCTGAGATGCACCCCAATGAAAAGGAGGGCTTCGATCGCCTCCTTC
GTCCCGATGACAGCTACACGGCAGAGGGTGTCTACTGGGCCGATCTGCCC
ATTGGGCAGCGTGTCAAGTTCGTCACCTCGGTCGACAACAAGGAACGTAG
CCGTCAATGGTCGGCTCTCTGGGCCGAGATCAAGCAGGACCCCCTCTCTC
CAATGATGAATTACTTCCGCAACACCATCATTCCCGGTGCTGGTATTGGT
CTGGAAGGTTACGTCCTCCTGTCCATCGGAAACATCTCCACCCTCTTCCA
ACACTCCTTCTCAGCTTGCTGGGACAAGTACGAACTCTGTAACAAGCAGT
GGATCAACGCCATTACCTACCTTGAAATCGTCGGTATCATTATCGGCCAG
GTCCTCGTTGGTGTCATTGGTGACTGGGTGGGCCGTCGTTGGGGTTTGCT
ACAGGATGCCTGGATCATGTTCTTGGGTCTGGTCATGTTGACCTGCGCCT
GGGGTGTCACACAAAACGGCTGGGTCATCTGCTATGCTTGGTCGCTTTTC
ATCTACGGTATCGGTGTTGGTGGTGAGTACCCGATGACGGCCACCAGCGG
TATGGAGAACGCTGTTGGTTCCGGCAAGCTCTCTACTCGCGAGGATCGTC
TTCACCGTGGTTCCAAGGTTGTTGGTGTCTTCTCCATGCAGGGTTGGGGA
CAAGTCCTTAACCAGGCCATCCTCATGATCTTGCTTCTTATCTTCAACGC
TGGTAGCGGAGAGGAGCCGATCAGCGAGACCAACACCCAATGGACCTACC
GTATCTCCTTCGTCATCCCCATGGTTGGTACTTTCTGGCTGATCTACTAC
CGTGCATACCACATGAAGGCCGCCAGTAAGCAGCTGGCAGCCACCAAGAA
GAAGAACTCGGTCACTGGTTACGACACCGAGTCTCTCCGCCTCACTTTCA
AGTACTTTACTCCTCGTGTTATGGCCACTGCTGGTGGATGGTTCGCCAAC
GACGTTTTCTTCTACGGTGCCAAGCTCTTCTCCAGTGACTTTATCAAGGT
CATCAGCCCCAACACCAAGTCTATCTTCGTTACCTGGCAGTGGAGTTTCA
TCAACTGCGTTGTCACCCTGATGGGCTACTATGCTGCCATTATGTTCGTG
GACAACAAGCTCTACGGCCGCAAGTGGATGCAAATCATGGGCTTCTTGCT
CTGCTTCATCGTGTACGTGGTGCCTGCCTTCCACTACCACTACTACACCG
AAGCCGCCCACATCCACTCCTTCCAGGCCATGTACTTCCTGGGCAGTTTC
TTCAACCAATTCGGTCCCAACTGCATCACCTTCCTGGTCGCTGGTGAAGT
CTTCCCCACCCCTATCCGTGCCACCGCCCACGGTATCTCTGCTGCCTGCG
GTAAGCTGGGAGCCCTGTTGGCTGCTATCCTCTTCAACTACATCGACACT
CAGACCAAGTTCTACTTTGTGCCCTGGTGGGGTATCTTCGGCATGTTCCT
GACCTTCTTCTTCCTTCCGGATACCACCGGTCTGGATCTCAAGGAGCAGG
AGCGCCGCTGGAGATTCATCCGCGAGGGTCGTGAGCACGAGTACCACGGT
GTTGCTATTCACCCCAAGCACCTGTCCTTGTGGGAGCGCTTCCGTGGCGT
CGGCAAGTACTACGACCCCGAGCTGGACTACCAGCAGCGCGTTGAGGAGT
ACCGCACTGAGTGGGAGGCCATCATGGCTCGCCGCAGCGAAGAGACCAAG
AACGGCGACGATGTCGATTTGGCCTTCGTCGAGGATGACATCTTGGAGGG
TTCCGTCCACAACTACTTCCACCGCACCAGCTCGTTCACCAAGAGCCAGA
GCGTGGAGAAGGTCACTGAGGCTGAGCCCTCGGAGTAAATGGCGGACTTT
GGCCCTCGTGCTCCTCACGGACCCGACATGAACGGCAAGCAGGATTTTGC
TGAGATGCACCCCAATGAAAAGGAGGGCTTCGATCGCCTCCTTCGTCCCG
ATGACAGCTACACGGCAGAGGGTGTCTACTGGGCCGATCTGCCCATTGGG
CAGCGTGTCAAGTTCGTCACCTCGGTCGACAACAAGGAACGTAGCCGTCA
ATGGTCGGCTCTCTGGGCCGAGATCAAGCAGGACCCCCTCTCTCCAATGA
TGAATTACTTCCGCAACACCATCATTCCCGGTGCTGGTATTGGTCTGGAA
GGTTACGTCCTCCTGTCCATCGGAAACATCTCCACCCTCTTCCAACACTC
CTTCTCAGCTTGCTGGGACAAGTACGAACTCTGTAACAAGCAGTGGATCA
ACGCCATTACCTACCTTGAAATCGTCGGTATCATTATCGGCCAGGTCCTC
GTTGGTGTCATTGGTGACTGGGTGGGCCGTCGTTGGGGTTTGCTACAGGA
TGCCTGGATCATGTTCTTGGGTCTGGTCATGTTGACCTGCGCCTGGGGTG
TCACACAAAACGGCTGGGTCATCTGCTATGCTTGGTCGCTTTTCATCTAC
GGTATCGGTGTTGGTGGTGAGTACCCGATGACGGCCACCAGCGGTATGGA
GAACGCTGTTGGTTCCGGCAAGCTCTCTACTCGCGAGGATCGTCTTCACC
GTGGTTCCAAGGTTGTTGGTGTCTTCTCCATGCAGGGTTGGGGACAAGTC
CTTAACCAGGCCATCCTCATGATCTTGCTTCTTATCTTCAACGCTGGTAG
CGGAGAGGAGCCGATCAGCGAGACCAACACCCAATGGACCTACCGTATCT
CCTTCGTCATCCCCATGGTTGGTACTTTCTGGCTGATCTACTACCGTGCA
TACCACATGAAGGCCGCCAGTAAGCAGCTGGCAGCCACCAAGAAGAAGAA
CTCGGTCACTGGTTACGACACCGAGTCTCTCCGCCTCACTTTCAAGTACT
TTACTCCTCGTGTTATGGCCACTGCTGGTGGATGGTTCGCCAACGACGTT
TTCTTCTACGGTGCCAAGCTCTTCTCCAGTGACTTTATCAAGGTCATCAG
CCCCAACACCAAGTCTATCTTCGTTACCTGGCAGTGGAGTTTCATCAACT
GCGTTGTCACCCTGATGGGCTACTATGCTGCCATTATGTTCGTGGACAAC
AAGCTCTACGGCCGCAAGTGGATGCAAATCATGGGCTTCTTGCTCTGCTT
CATCGTGTACGTGGTGCCTGCCTTCCACTACCACTACTACACCGAAGCCG
CCCACATCCACTCCTTCCAGGCCATGTACTTCCTGGGCAGTTTCTTCAAC
CAATTCGGTCCCAACTGCATCACCTTCCTGGTCGCTGGTGAAGTCTTCCC
CACCCCTATCCGTGCCACCGCCCACGGTATCTCTGCTGCCTGCGGTAAGC
TGGGAGCCCTGTTGGCTGCTATCCTCTTCAACTACATCGACACTCAGACC
AAGTTCTACTTTGTGCCCTGGTGGGGTATCTTCGGCATGTTCCTGACCTT
CTTCTTCCTTCCGGATACCACCGGTCTGGATCTCAAGGAGCAGGAGCGCC
GCTGGAGATTCATCCGCGAGGGTCGTGAGCACGAGTACCACGGTGTTGCT
ATTCACCCCAAGCACCTGTCCTTGTGGGAGCGCTTCCGTGGCGTCGGCAA
GTACTACGACCCCGAGCTGGACTACCAGCAGCGCGTTGAGGAGTACCGCA
CTGAGTGGGAGGCCATCATGGCTCGCCGCAGCGAAGAGACCAAGAACGGC
GACGATGTCGATTTGGCCTTCGTCGAGGATGACATCTTGGAGGGTTCCGT
CCACAACTACTTCCACCGCACCAGCTCGTTCACCAAGAGCCAGAGCGTGG
AGAAGGTCACTGAGGCTGAGCCCTCGGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003467-T1.utr5p1 | KJC3_003467-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003467-T1.utr3p1 | KJC3_003467-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | PFAM:PF00083 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1980887..1983352 + |
|
