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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2082277..2084151- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003502-T1 ID=KJC3_003502-T1|Name=KJC3_003502-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1875bp|location=Sequence derived from alignment at ch3:2082277..2084151- (Aspergillus niger KJC3)
ATGCCCGAAGCCCGCGCAGATAGTGAGCGCATAGCGCGGCTAATGGATAC
AGGCACGCTTTTCCCTACTATGACAGACGATGCGGAGCGCCAGAGACTCC
GAACTAGCCTCTTAAACATCAAAGGAAGAATTTTAAGCCTCCACTCCATA
GTGCAGGACTCGTTGATATTACAGGCCTGCGCGGATGCACTAAAACGGCT
TGTTCCCTCCACGTCCGGCGATCTGCGGGACACTCTCATGCGGAACTTCA
ATGGGTGCGGTGGAGCCTCGCAGATTCAGATTGCAGAGGAAATGATGGAG
CCTTTACATCATAATCCGAATATTCCACCCGATCTGCTTCAAGTACAAAT
GGCGATAGCTGCATATCTGCAACTTTGGTTATTTGCTCTTCGCCACATCG
AATGCCTTACCTGCATACGTCTCGCGGGTTCTTATGCTAAACGCAGAAAC
GAAACATACATATTCCGTCCAACACCTGAGGAGTCAACCCGCCGACTGGC
AGCCTTAGCGTCAAAATTGGGATTTGAGTCTACTCAAATCCAGTCCCTTG
GCAAGCCAACACTGATGGCAGCAAAAGCTAATGCACAAGCATATTTGGCA
GGGCGGCGTCCACCATCTCGCTATGATTACCGTCCAGGTCACATGGACAG
AGCATCAGGACAGATTGTTGGATTTCTCGAGCAAATCAAAGAAAAGCCTG
CCGTAAAGCTCGCGATGCCACCACTTGCCGTGAATGATATAAGGAAAATA
CCAGCAACTATGAAGCGTTGTGGTCTGCCTTTGTGGGAGTCACACGCAGA
GGACCAGTGCTATCTATTTCTGCCGTACATTTACAGGCAGGACGGGCTAT
CAGGGGAGTATGTGACGACCTTTACAGTCTTGCAAGATATGATCTTCTGC
TTTTTCGGTCGTAGCCCATTCCCTGCAGACTTCCAGGTACCATGGTGGGG
TAATGGAGCACAATCAAATGAAGCACAACAACCAAGTGAAGCACAACAAC
CAAGTGAAGCACAACAATCAGGTGGAGCACAACAATCAGGTGGAGCACAA
CAATCAGGTGGAGCACAACAATCAGGTGGAGCACTACAACCGGATGAGCC
CTTTGTCCAGGATGACGAGGATCCAGAGTCTTGGGTAAGTTCACCTGTTC
ATCTCGAAGACCACCCTCCTGGGATTCCACTTTATCCTGGCGAGCGAGAG
ACATCTAAATATGATCAGGCCCCAAGACCCGCCGAAGAGTCCGCCGAAGA
TGTAGCTATGACAGGCACAGGGGAGGAACAACACGGGGATCATCAGCCAG
AGACTCCCGAACATCATCCAGAGATATCCACGAGTGAGCGGATAGAACGT
CCGCTGAATACTCCAGCTCAACAGGCTCCATTGTTAAGATATAGAGGGAC
ACCACTCGCTGCTGGGTTTGAAAGTGACATGACTGCTGAACCACTAGGGG
TGTGGAATAAGATAAGGAACAATAATGGCAATAAAAAAATCTTGACAGAA
TGGACACAGCAACGTGATAAATGCCTTGCAGTTCTATACCGTTTTGAAGA
AGGATTGTATTGCAAGTTCCAGCTCGACCATCCGAATTTCCGTGAGCAAC
TCGATGGCATTCTGCAGGAATTTGAGAATGACACTTACTTCTCTGAGCTT
GAAGAGGTTGGCATGGTCAATTTAATGGATGTCTATGATCGCTTGCGCAA
AACTGCACTAATCCTAGTTTTCGAAAAGCCTATCGAGTTTCATGAGCTGA
AAGAGTATGTCTACTCCTTTAAAGTCATAACAGGAAAGCGTCAGCGACAG
TCTGGGGAACCTGAGTCGACAAAGAGGAAACCAGACGTGGAAGAGAAGAG
ACCTGAGTCGGAAGAGGAGCTTTGA back to topCoding sequence (CDS) from alignment at ch3:2082277..2084151- >KJC3_003502-T1 ID=KJC3_003502-T1|Name=KJC3_003502-T1|organism=Aspergillus niger KJC3|type=CDS|length=3582bp|location=Sequence derived from alignment at ch3:2082277..2084151- (Aspergillus niger KJC3)
GCCCCAAGACCCGCCGAAGAGTCCGCCGAAGATGTAGCTATGACAGGCAC
AGGGGAGGAACAACACGGGGATCATCAGCCAGAGACTCCCGAACATCATC
CAGAGATATCCACGAGTGAGCGGATAGAACGTCCGCTGAATACTCCAGCT
CAACAGGCTCCATTGTTAAGATATAGAGGGACACCACTCGCTGCTGGGTT
TGAAAGTGACATGACTGCTGAACCACTAGGGGTGTGGAATAAGATAAGGA
ACAATAATGGCAATAAAAAAATCTTGACAGAATGGACACAGCAACGTGAT
AAATGCCTTGCAGTTCTATACCGTTTTGAAGAAGGATTGTATTGCAAGTT
CCAGCTCGACCATCCGAATTTCCGTGAGCAACTCGATGGCATTCTGCAGG
AATTTGAGAATGACACTTACTTCTCTGAGCTTGAAGAGGTTGGCATGGTC
AATTTAATGGATGTCTATGATCGCTTGCGCAAAACTGCACTAATCCTAGT
TTTCGAAAAGCCTATCGAGTTTCATGAGCTGAAAGAGTATGTCTACTCCT
TTAAAGTCATAACAGGAAAGCGTCAGCGACAGTCTGGGGAACCTGAGTCG
ACAAAGAGGAAACCAGACGTGGAAGAGAAGAGACCTGAGTCGGAAGAGGA
GCTTTGAATGCCCGAAGCCCGCGCAGATAGTGAGCGCATAGCGCGGCTAA
TGGATACAGGCACGCTTTTCCCTACTATGACAGACGATGCGGAGCGCCAG
AGACTCCGAACTAGCCTCTTAAACATCAAAGGAAGAATTTTAAGCCTCCA
CTCCATAGTGCAGGACTCGTTGATATTACAGGCCTGCGCGGATGCACTAA
AACGGCTTGTTCCCTCCACGTCCGGCGATCTGCGGGACACTCTCATGCGG
AACTTCAATGGGTGCGGTGGAGCCTCGCAGATTCAGATTGCAGAGGAAAT
GATGGAGCCTTTACATCATAATCCGAATATTCCACCCGATCTGCTTCAAG
TACAAATGGCGATAGCTGCATATCTGCAACTTTGGTTATTTGCTCTTCGC
CACATCGAATGCCTTACCTGCATACGTCTCGCGGGTTCTTATGCTAAACG
CAGAAACGAAACATACATATTCCGTCCAACACCTGAGGAGTCAACCCGCC
GACTGGCAGCCTTAGCGTCAAAATTGGGATTTGAGTCTACTCAAATCCAG
TCCCTTGGCAAGCCAACACTGATGGCAGCAAAAGCTAATGCACAAGCATA
TTTGGCAGGGCGGCGTCCACCATCTCGCTATGATTACCGTCCAGGTCACA
TGGACAGAGCATCAGGACAGATTGTTGGATTTCTCGAGCAAATCAAAGAA
AAGCCTGCCGTAAAGCTCGCGATGCCACCACTTGCCGTGAATGATATAAG
GAAAATACCAGCAACTATGAAGCGTTGTGGTCTGCCTTTGTGGGAGTCAC
ACGCAGAGGACCAGTGCTATCTATTTCTGCCGTACATTTACAGGCAGGAC
GGGCTATCAGGGGAGTATGTGACGACCTTTACAGTCTTGCAAGATATGAT
CTTCTGCTTTTTCGGTCGTAGCCCATTCCCTGCAGACTTCCAGGTACCAT
GGTGGGGTAATGGAGCACAATCAAATGAAGCACAACAACCAAGTGAAGCA
CAACAACCAAGTGAAGCACAACAATCAGGTGGAGCACAACAATCAGGTGG
AGCACAACAATCAGGTGGAGCACAACAATCAGGTGGAGCACTACAACCGG
ATGAGCCCTTTGTCCAGGATGACGAGGATCCAGAGTCTTGGGCCCCAAGA
CCCGCCGAAGAGTCCGCCGAAGATGTAGCTATGACAGGCACAGGGGAGGA
ACAACACGGGGATCATCAGCCAGAGACTCCCGAACATCATCCAGAGATAT
CCACGAGTGAGCGGATAGAACGTCCGCTGAATACTCCAGCTCAACAGGCT
CCATTGTTAAGATATAGAGGGACACCACTCGCTGCTGGGTTTGAAAGTGA
CATGACTGCTGAACCACTAGGGGTGTGGAATAAGATAAGGAACAATAATG
GCAATAAAAAAATCTTGACAGAATGGACACAGCAACGTGATAAATGCCTT
GCAGTTCTATACCGTTTTGAAGAAGGATTGTATTGCAAGTTCCAGCTCGA
CCATCCGAATTTCCGTGAGCAACTCGATGGCATTCTGCAGGAATTTGAGA
ATGACACTTACTTCTCTGAGCTTGAAGAGGTTGGCATGGTCAATTTAATG
GATGTCTATGATCGCTTGCGCAAAACTGCACTAATCCTAGTTTTCGAAAA
GCCTATCGAGTTTCATGAGCTGAAAGAGTATGTCTACTCCTTTAAAGTCA
TAACAGGAAAGCGTCAGCGACAGTCTGGGGAACCTGAGTCGACAAAGAGG
AAACCAGACGTGGAAGAGAAGAGACCTGAGTCGGAAGAGGAGCTTTGAAT
GCCCGAAGCCCGCGCAGATAGTGAGCGCATAGCGCGGCTAATGGATACAG
GCACGCTTTTCCCTACTATGACAGACGATGCGGAGCGCCAGAGACTCCGA
ACTAGCCTCTTAAACATCAAAGGAAGAATTTTAAGCCTCCACTCCATAGT
GCAGGACTCGTTGATATTACAGGCCTGCGCGGATGCACTAAAACGGCTTG
TTCCCTCCACGTCCGGCGATCTGCGGGACACTCTCATGCGGAACTTCAAT
GGGTGCGGTGGAGCCTCGCAGATTCAGATTGCAGAGGAAATGATGGAGCC
TTTACATCATAATCCGAATATTCCACCCGATCTGCTTCAAGTACAAATGG
CGATAGCTGCATATCTGCAACTTTGGTTATTTGCTCTTCGCCACATCGAA
TGCCTTACCTGCATACGTCTCGCGGGTTCTTATGCTAAACGCAGAAACGA
AACATACATATTCCGTCCAACACCTGAGGAGTCAACCCGCCGACTGGCAG
CCTTAGCGTCAAAATTGGGATTTGAGTCTACTCAAATCCAGTCCCTTGGC
AAGCCAACACTGATGGCAGCAAAAGCTAATGCACAAGCATATTTGGCAGG
GCGGCGTCCACCATCTCGCTATGATTACCGTCCAGGTCACATGGACAGAG
CATCAGGACAGATTGTTGGATTTCTCGAGCAAATCAAAGAAAAGCCTGCC
GTAAAGCTCGCGATGCCACCACTTGCCGTGAATGATATAAGGAAAATACC
AGCAACTATGAAGCGTTGTGGTCTGCCTTTGTGGGAGTCACACGCAGAGG
ACCAGTGCTATCTATTTCTGCCGTACATTTACAGGCAGGACGGGCTATCA
GGGGAGTATGTGACGACCTTTACAGTCTTGCAAGATATGATCTTCTGCTT
TTTCGGTCGTAGCCCATTCCCTGCAGACTTCCAGGTACCATGGTGGGGTA
ATGGAGCACAATCAAATGAAGCACAACAACCAAGTGAAGCACAACAACCA
AGTGAAGCACAACAATCAGGTGGAGCACAACAATCAGGTGGAGCACAACA
ATCAGGTGGAGCACAACAATCAGGTGGAGCACTACAACCGGATGAGCCCT
TTGTCCAGGATGACGAGGATCCAGAGTCTTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022198 |
| DBxref | PFAM:PF12520 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2082277..2084151 - |
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