You are here

Home

KJC3_003517-T2, KJC3_003517-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003517-T2
Unique NameKJC3_003517-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2156114..2157713+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003517-T2 ID=KJC3_003517-T2|Name=KJC3_003517-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1600bp|location=Sequence derived from alignment at ch3:2156114..2157713+ (Aspergillus niger KJC3)
TCCAGGCTGAGAAGAAATCCCCGCCTTCTTCTATGAACGGCGAATTAATT
CTAGATTATCTTTTATCAGTCCGCCTTCCTCTGACTGCTCGAAAATTCCA
GGTAGTACAGGTATTCCACTGTGATCCACCATGGCCGGGAGCGCTTTCAC
ATTCTTTCATGCTAAGGTCTCAAAATCGACATTTCTGGTAAGTGACATCA
AGGTTAGCCGTGGGTGTCTACCGGCTCCGCACTCACACTTTCTCGTCGGG
CATAACAGGGCCTACTCTGGACATTCACTTGCACCTCCTTCCTTTTCGTC
TTGTTCCGTGTGGTTGTTCGATATGGATCGTTCAAGCGCCTCTACCTGGA
TGACTTCTTTGTGCTGCTAGCATGGGCAATCATGTTGACTACCGCCATCA
TCTGGCAAATTGAGGGGCAAGTACTGTATGAAATGTATGCGATCAGTGAG
GGCAAGCAGCCTTACACCCCGGATATTCTACCAAAGTTCGGAAAGTTCAT
GCGTTTCGTCGCCCCACTCACCATTCTGTTCTACTCGGGATTATGGTGTT
TCAAATTCTCATTCTTAGCCTTCTTCTACCGGCTTGGTTCCAAGGTCAAG
AGTCATCGGATCTGGTGGTATGTGGTCTTGTTTTGCACCGTGGCTGTCTG
GATGGCCTCGGTCGCGGATATCGACTACCGATGCAGTTTTGGGGGTTTGG
AATATACCATGAGTGTGTCTATATCTCCATCACGAGAGCAAATAGCAGTA
CTGATATAATCAGCCCAATGCTCCAACCTCTACCATGTACACTTTGAAAA
CCGCACATTTTGGGCGAACTGTGCCGGGGATGTGGTTACCGATCTTATGA
GTGAGTGGTCCTTCCCCTTTCCTCCGCCGACCATAACTATAGGGAGACAT
GGCTAATTTGGTCCTTTGCTCTCCTCAGTTTTATCAATCCCCGTGCTCAT
CCTCTGGAAAACACGCATTACTTTCACAAAGAAGCTCATCTTATTGAGTG
TCTTCTCCGTCACGATTATCGTCATGGCGATCGCCATTATCCGAGTCGTC
GTCAATACCTCCCTCGATGAACCCGTCGATATCTCCTGGTTATATCTGTG
GAGCTTTATTGAAATGGGAACCGGTACGCTCAATCACCACATCGAACACC
CCGTTTTTATTACCAAACTTTCCTCTGCAATTTCTCTATTCTGAAGTCTC
GCTAACCTTTCCCCAGCGATAATAATCTCCTGCGTCGCCTCCTTCCGTCA
GCTCTTCGTGACATCACAAAACCAACATCTCTTCGGCAAAGTCGCGTACC
ACCCACCCAATAACCCTCTCCTCAACAGCATGCGGAATGGCTATAGACGC
ACACAGTCCGGTCCAGGAGTCGAGGGAGATGGTTCGTCTCAGAGAAGCGG
TACTGCTCCGAAGATACTCCCCTTGGACCTTGTGCATGTGCGAAACGAAT
TTGATGTTGAGAGCGCGCCGGCTAGTCGAAATCATTCTCGTGAGGATCCA
TGGAATTGAGGACACCGATTGACGGGATGAATGTATGATGTGTAAATGGA
CCCGGCTTATAGTTGAACTATCATAACAGGTTTGGTTGGTTGGTTGGGAG
back to top

Coding sequence (CDS) from alignment at ch3:2156114..2157713+

>KJC3_003517-T2 ID=KJC3_003517-T2|Name=KJC3_003517-T2|organism=Aspergillus niger KJC3|type=CDS|length=3624bp|location=Sequence derived from alignment at ch3:2156114..2157713+ (Aspergillus niger KJC3)
ATGTTGACTACCGCCATCATCTGGCAAATTGAGGGGCAAGTACTGTATGA
AATGTATGCGATCAGTGAGGGCAAGCAGCCTTACACCCCGGATATTCTAC
CAAAGTTCGGAAAGTTCATGCGTTTCGTCGCCCCACTCACCATTCTGTTC
TACTCGGGATTATGGTGTTTCAAATTCTCATTCTTAGCCTTCTTCTACCG
GCTTGGTTCCAAGGTCAAGAGTCATCGGATCTGGTGGTATGTGGTCTTGT
TTTGCACCGTGGCTGTCTGGATGGCCTCGGTCGCGGATATCGACTACCGA
TGCAGTTTTGGGGGTTTGGAATATACCATGACCCAATGCTCCAACCTCTA
CCATGTACACTTTGAAAACCGCACATTTTGGGCGAACTGTGCCGGGGATG
TGGTTACCGATCTTATGATTTTATCAATCCCCGTGCTCATCCTCTGGAAA
ACACGCATTACTTTCACAAAGAAGCTCATCTTATTGAGTGTCTTCTCCGT
CACGATTATCGTCATGGCGATCGCCATTATCCGAGTCGTCGTCAATACCT
CCCTCGATGAACCCGTCGATATCTCCTGGTTATATCTGTGGAGCTTTATT
GAAATGGGAACCGCGATAATAATCTCCTGCGTCGCCTCCTTCCGTCAGCT
CTTCGTGACATCACAAAACCAACATCTCTTCGGCAAAGTCGCGTACCACC
CACCCAATAACCCTCTCCTCAACAGCATGCGGAATGGCTATAGACGCACA
CAGTCCGGTCCAGGAGTCGAGGGAGATGGTTCGTCTCAGAGAAGCGGTAC
TGCTCCGAAGATACTCCCCTTGGACCTTGTGCATGTGCGAAACGAATTTG
ATGTTGAGAGCGCGCCGGCTAGTCGAAATCATTCTCGTGAGGATCCATGG
AATTGAATGTTGACTACCGCCATCATCTGGCAAATTGAGGGGCAAGTACT
GTATGAAATGTATGCGATCAGTGAGGGCAAGCAGCCTTACACCCCGGATA
TTCTACCAAAGTTCGGAAAGTTCATGCGTTTCGTCGCCCCACTCACCATT
CTGTTCTACTCGGGATTATGGTGTTTCAAATTCTCATTCTTAGCCTTCTT
CTACCGGCTTGGTTCCAAGGTCAAGAGTCATCGGATCTGGTGGTATGTGG
TCTTGTTTTGCACCGTGGCTGTCTGGATGGCCTCGGTCGCGGATATCGAC
TACCGATGCAGTTTTGGGGGTTTGGAATATACCATGACCCAATGCTCCAA
CCTCTACCATGTACACTTTGAAAACCGCACATTTTGGGCGAACTGTGCCG
GGGATGTGGTTACCGATCTTATGATTTTATCAATCCCCGTGCTCATCCTC
TGGAAAACACGCATTACTTTCACAAAGAAGCTCATCTTATTGAGTGTCTT
CTCCGTCACGATTATCGTCATGGCGATCGCCATTATCCGAGTCGTCGTCA
ATACCTCCCTCGATGAACCCGTCGATATCTCCTGGTTATATCTGTGGAGC
TTTATTGAAATGGGAACCGCGATAATAATCTCCTGCGTCGCCTCCTTCCG
TCAGCTCTTCGTGACATCACAAAACCAACATCTCTTCGGCAAAGTCGCGT
ACCACCCACCCAATAACCCTCTCCTCAACAGCATGCGGAATGGCTATAGA
CGCACACAGTCCGGTCCAGGAGTCGAGGGAGATGGTTCGTCTCAGAGAAG
CGGTACTGCTCCGAAGATACTCCCCTTGGACCTTGTGCATGTGCGAAACG
AATTTGATGTTGAGAGCGCGCCGGCTAGTCGAAATCATTCTCGTGAGGAT
CCATGGAATTGAATGTTGACTACCGCCATCATCTGGCAAATTGAGGGGCA
AGTACTGTATGAAATGTATGCGATCAGTGAGGGCAAGCAGCCTTACACCC
CGGATATTCTACCAAAGTTCGGAAAGTTCATGCGTTTCGTCGCCCCACTC
ACCATTCTGTTCTACTCGGGATTATGGTGTTTCAAATTCTCATTCTTAGC
CTTCTTCTACCGGCTTGGTTCCAAGGTCAAGAGTCATCGGATCTGGTGGT
ATGTGGTCTTGTTTTGCACCGTGGCTGTCTGGATGGCCTCGGTCGCGGAT
ATCGACTACCGATGCAGTTTTGGGGGTTTGGAATATACCATGACCCAATG
CTCCAACCTCTACCATGTACACTTTGAAAACCGCACATTTTGGGCGAACT
GTGCCGGGGATGTGGTTACCGATCTTATGATTTTATCAATCCCCGTGCTC
ATCCTCTGGAAAACACGCATTACTTTCACAAAGAAGCTCATCTTATTGAG
TGTCTTCTCCGTCACGATTATCGTCATGGCGATCGCCATTATCCGAGTCG
TCGTCAATACCTCCCTCGATGAACCCGTCGATATCTCCTGGTTATATCTG
TGGAGCTTTATTGAAATGGGAACCGCGATAATAATCTCCTGCGTCGCCTC
CTTCCGTCAGCTCTTCGTGACATCACAAAACCAACATCTCTTCGGCAAAG
TCGCGTACCACCCACCCAATAACCCTCTCCTCAACAGCATGCGGAATGGC
TATAGACGCACACAGTCCGGTCCAGGAGTCGAGGGAGATGGTTCGTCTCA
GAGAAGCGGTACTGCTCCGAAGATACTCCCCTTGGACCTTGTGCATGTGC
GAAACGAATTTGATGTTGAGAGCGCGCCGGCTAGTCGAAATCATTCTCGT
GAGGATCCATGGAATTGAATGTTGACTACCGCCATCATCTGGCAAATTGA
GGGGCAAGTACTGTATGAAATGTATGCGATCAGTGAGGGCAAGCAGCCTT
ACACCCCGGATATTCTACCAAAGTTCGGAAAGTTCATGCGTTTCGTCGCC
CCACTCACCATTCTGTTCTACTCGGGATTATGGTGTTTCAAATTCTCATT
CTTAGCCTTCTTCTACCGGCTTGGTTCCAAGGTCAAGAGTCATCGGATCT
GGTGGTATGTGGTCTTGTTTTGCACCGTGGCTGTCTGGATGGCCTCGGTC
GCGGATATCGACTACCGATGCAGTTTTGGGGGTTTGGAATATACCATGAC
CCAATGCTCCAACCTCTACCATGTACACTTTGAAAACCGCACATTTTGGG
CGAACTGTGCCGGGGATGTGGTTACCGATCTTATGATTTTATCAATCCCC
GTGCTCATCCTCTGGAAAACACGCATTACTTTCACAAAGAAGCTCATCTT
ATTGAGTGTCTTCTCCGTCACGATTATCGTCATGGCGATCGCCATTATCC
GAGTCGTCGTCAATACCTCCCTCGATGAACCCGTCGATATCTCCTGGTTA
TATCTGTGGAGCTTTATTGAAATGGGAACCGCGATAATAATCTCCTGCGT
CGCCTCCTTCCGTCAGCTCTTCGTGACATCACAAAACCAACATCTCTTCG
GCAAAGTCGCGTACCACCCACCCAATAACCCTCTCCTCAACAGCATGCGG
AATGGCTATAGACGCACACAGTCCGGTCCAGGAGTCGAGGGAGATGGTTC
GTCTCAGAGAAGCGGTACTGCTCCGAAGATACTCCCCTTGGACCTTGTGC
ATGTGCGAAACGAATTTGATGTTGAGAGCGCGCCGGCTAGTCGAAATCAT
TCTCGTGAGGATCCATGGAATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003517KJC3_003517Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003517-T2KJC3_003517-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003517-T2.utr5p1KJC3_003517-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003517-T2.exon1KJC3_003517-T2.exon1Aspergillus niger KJC3exon
KJC3_003517-T2.exon2KJC3_003517-T2.exon2Aspergillus niger KJC3exon
KJC3_003517-T2.exon3KJC3_003517-T2.exon3Aspergillus niger KJC3exon
KJC3_003517-T2.exon4KJC3_003517-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003517-T2.cdsKJC3_003517-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003517-T2.utr3p1KJC3_003517-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2156114..2157713 +
Powered by Drupal