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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2217287..2218408+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003541-T1 ID=KJC3_003541-T1|Name=KJC3_003541-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1122bp|location=Sequence derived from alignment at ch3:2217287..2218408+ (Aspergillus niger KJC3)
GTGCTATCTGGTTCTTGATAAGGCTCAACTGACCACTCCGACCTTCTTTA
TGAGCGAATAAAGGAAACATCTATTTCACCTCTAGGTTATCAGTAGATAT
ACCCACCAGCCCTCGTGATCTGTTAATCCCATACAATGTCCACAAACGAC
ATCCGAGGCCGACTAGCCCTAATAACCGGTGCCTCCGGAGGGTCAGTTTT
CTCCTCCAATCAATCCCTGGGAATCTAGTCCTCCAATTGGCCCCAAATTG
AATCACCAGAACTAATAAGCCTCTAACTATCAGCATCGGCTCCGCCTGCG
CCCACAAGCTCGCCGAAAATGGCGCCCACCTAGCCCTCACTTACTCCACC
AATCTTGCCGCGATACAATCCCTCCACGCAGATCTGCAATCTCGCCATCC
TGATCTTCGCATTTCCACCCACAAAGTCGACCTCCGCTCCGCTACCGACA
TCACCTTATTATTCGACCAAATCATTGCCCAACATGATGGCCACAGCCCC
GACATCCTCATCTCCAACGCAGGCACTGGCAAACGAATCACCAATATCTG
GGACATCGACCTATTAGACTTCGACGACATGATCACTACTAATCTCCGCG
CATCATTTATCCTAGTCAAGGGCGTGGTCGAACACATGAAGGCGCAACGT
TGGGGCCGTATTGTTTTTATGTCGTCTATTGCCGCTTATGGGGGTGGTAT
TAATGGGTGCCGTAAGTTAATCCCTATCAATTCTACTTAACATATGCGTA
TAGGGAAAACGAACATTACTAATAGTGATTCTATGATATATAGATTATGC
AGCTTCCAAAGGTGGCCTCACCGGCATGATGAAGAATCTTGCTACCAGAC
TAGCTGAGTATAATATCAGCGTGAATGATGTCGCTCCCGCAATGATTGGG
GATACGGGGATGATACCGAATGCCGAGGCTGTGCCGGAGGTGGTGAAGGG
GATCCCGTTGGGGAGACTGGGGATGCCGGAGGAGACAGCGAATGCGGTTC
TGATGTTAGTTACCACGGGGTATATGACGGGGCAGAGTCTTTTGCTGGCG
GGGGGATTGAGATGAAATTCCTGCTTGGTTGGCTGAATTATTCTCAGATA
TAGTTCAAGTACTGGATTGACA back to topCoding sequence (CDS) from alignment at ch3:2217287..2218408+ >KJC3_003541-T1 ID=KJC3_003541-T1|Name=KJC3_003541-T1|organism=Aspergillus niger KJC3|type=CDS|length=2268bp|location=Sequence derived from alignment at ch3:2217287..2218408+ (Aspergillus niger KJC3)
ATGTCCACAAACGACATCCGAGGCCGACTAGCCCTAATAACCGGTGCCTC
CGGAGGCATCGGCTCCGCCTGCGCCCACAAGCTCGCCGAAAATGGCGCCC
ACCTAGCCCTCACTTACTCCACCAATCTTGCCGCGATACAATCCCTCCAC
GCAGATCTGCAATCTCGCCATCCTGATCTTCGCATTTCCACCCACAAAGT
CGACCTCCGCTCCGCTACCGACATCACCTTATTATTCGACCAAATCATTG
CCCAACATGATGGCCACAGCCCCGACATCCTCATCTCCAACGCAGGCACT
GGCAAACGAATCACCAATATCTGGGACATCGACCTATTAGACTTCGACGA
CATGATCACTACTAATCTCCGCGCATCATTTATCCTAGTCAAGGGCGTGG
TCGAACACATGAAGGCGCAACGTTGGGGCCGTATTGTTTTTATGTCGTCT
ATTGCCGCTTATGGGGGTGGTATTAATGGGTGCCATTATGCAGCTTCCAA
AGGTGGCCTCACCGGCATGATGAAGAATCTTGCTACCAGACTAGCTGAGT
ATAATATCAGCGTGAATGATGTCGCTCCCGCAATGATTGGGGATACGGGG
ATGATACCGAATGCCGAGGCTGTGCCGGAGGTGGTGAAGGGGATCCCGTT
GGGGAGACTGGGGATGCCGGAGGAGACAGCGAATGCGGTTCTGATGTTAG
TTACCACGGGGTATATGACGGGGCAGAGTCTTTTGCTGGCGGGGGGATTG
AGATGAATGTCCACAAACGACATCCGAGGCCGACTAGCCCTAATAACCGG
TGCCTCCGGAGGCATCGGCTCCGCCTGCGCCCACAAGCTCGCCGAAAATG
GCGCCCACCTAGCCCTCACTTACTCCACCAATCTTGCCGCGATACAATCC
CTCCACGCAGATCTGCAATCTCGCCATCCTGATCTTCGCATTTCCACCCA
CAAAGTCGACCTCCGCTCCGCTACCGACATCACCTTATTATTCGACCAAA
TCATTGCCCAACATGATGGCCACAGCCCCGACATCCTCATCTCCAACGCA
GGCACTGGCAAACGAATCACCAATATCTGGGACATCGACCTATTAGACTT
CGACGACATGATCACTACTAATCTCCGCGCATCATTTATCCTAGTCAAGG
GCGTGGTCGAACACATGAAGGCGCAACGTTGGGGCCGTATTGTTTTTATG
TCGTCTATTGCCGCTTATGGGGGTGGTATTAATGGGTGCCATTATGCAGC
TTCCAAAGGTGGCCTCACCGGCATGATGAAGAATCTTGCTACCAGACTAG
CTGAGTATAATATCAGCGTGAATGATGTCGCTCCCGCAATGATTGGGGAT
ACGGGGATGATACCGAATGCCGAGGCTGTGCCGGAGGTGGTGAAGGGGAT
CCCGTTGGGGAGACTGGGGATGCCGGAGGAGACAGCGAATGCGGTTCTGA
TGTTAGTTACCACGGGGTATATGACGGGGCAGAGTCTTTTGCTGGCGGGG
GGATTGAGATGAATGTCCACAAACGACATCCGAGGCCGACTAGCCCTAAT
AACCGGTGCCTCCGGAGGCATCGGCTCCGCCTGCGCCCACAAGCTCGCCG
AAAATGGCGCCCACCTAGCCCTCACTTACTCCACCAATCTTGCCGCGATA
CAATCCCTCCACGCAGATCTGCAATCTCGCCATCCTGATCTTCGCATTTC
CACCCACAAAGTCGACCTCCGCTCCGCTACCGACATCACCTTATTATTCG
ACCAAATCATTGCCCAACATGATGGCCACAGCCCCGACATCCTCATCTCC
AACGCAGGCACTGGCAAACGAATCACCAATATCTGGGACATCGACCTATT
AGACTTCGACGACATGATCACTACTAATCTCCGCGCATCATTTATCCTAG
TCAAGGGCGTGGTCGAACACATGAAGGCGCAACGTTGGGGCCGTATTGTT
TTTATGTCGTCTATTGCCGCTTATGGGGGTGGTATTAATGGGTGCCATTA
TGCAGCTTCCAAAGGTGGCCTCACCGGCATGATGAAGAATCTTGCTACCA
GACTAGCTGAGTATAATATCAGCGTGAATGATGTCGCTCCCGCAATGATT
GGGGATACGGGGATGATACCGAATGCCGAGGCTGTGCCGGAGGTGGTGAA
GGGGATCCCGTTGGGGAGACTGGGGATGCCGGAGGAGACAGCGAATGCGG
TTCTGATGTTAGTTACCACGGGGTATATGACGGGGCAGAGTCTTTTGCTG
GCGGGGGGATTGAGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003541-T1.utr5p1 | KJC3_003541-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003541-T1.utr3p1 | KJC3_003541-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF01370 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2217287..2218408 + |
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