|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2228591..2231877- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003547-T1 ID=KJC3_003547-T1|Name=KJC3_003547-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3287bp|location=Sequence derived from alignment at ch3:2228591..2231877- (Aspergillus niger KJC3)
GGGCTAGTCGGGCCGAGAGGAGTAAGTGTAAGCTTGCCTCTTCATGACCC
CGTGACAGTGGATGGTGTTAAAAGTCACCTCCAGTGGAGGCATCCACCAG
TCAACTGGTGGGAGTTTTGAGTAAGGACGGAGGTATCTAGTAAGTATCGT
TGTTACTAGTCTCATATTCTATACGGAACTAAGCCGGAATTGACTTCTGG
GCGCAACTCTCTTCCCGAGCCATTTCTCCTCTTCTGCCTCTCCCCCCCCA
AAAATCCTCCCACTTCTTTGCCAATCCCACTTGGCAGTCTTTTCTCTTTC
TTTCAACGGCTCTCTCGCTTCGTTTGAGTGGCCTTTGGACCTTCGTTTGT
CCCCCCCGTGTGCCCATTCACTCCTCTGCTCTGCGTGATGGAATCCAACA
GCTGCATCCCATCAGGACCCGTCGTTTAGCGTTTGCTGCAAGGTAGGCCT
ATTTTCCCGGTGGACCCCGAATTTCCCTGAGCTGACCCATCATCCTGCTC
CAGCTTCTCCACATTCCAGCAGTCCCTTGTCCCGCGATCCCTGATCTCCC
CTCGTTGCCTTGTCTCGTTCCATTCGTTTGCAGCTCCCAAGACCCTCGTC
ACCTCGCTCCAGCGCACATGGCAGGTTTCATATTCCATGCATAGTCCACA
ATTTATCGCATAACTCCCGGGTCAATCCAAATCCCCTTGACGGACGTCCC
CACTGTCAAGGATTGTTCTGCGACCAGGCTCGAAATATACATTTTTTGCA
TTTTGGATTCACCGATCGCATCTCAAACACAAGAATCAAGCGGGATGGAG
CGCTCTGCCAGCGGCGGCTATCCCCAGCCGCTTTCTTCCCCTCCGCCTGT
TTACCTTCGTTCTTCTCCCCCCATTCCCCCGGTGCCCCGTGAACCCCGCC
GGGACAGCTTCAATCGCTTATACAGCAAGCCTATTCTCAGGAAATCTCTG
ACAGATCCGGTGTCCATGCCGGAAGATCGCCCCGAAAGCCAACGGTATTC
GGTTCCACGGGTCAGAATCCATGGAGAAAGCGATCAGCCAGTGCCGGAGT
TTCATGAGGATGGTTTTGAAATGACGCTTCCCACTGATGAATTCGCCCAA
ATATCCCTCTCTGAGCAGCAGCAGACTCATGGAAAGACCATCGACGCATC
ATCCCCACCGGGGGTGGAAATCTTCAAAGCCGGCCAGCTACCAGAGAATG
CGGCTTACGGACACACGCCTCGTAGCAGTGCCTCTTGGTCAGTAGTCGAT
CCTCACACAAAACATGATAGTCTCGCCAATACTAGCACGTCTTCCTTGGA
CCAACGACCTGCCAAGGACAGTCAGACCAGCTCTTCCCGAGATAGTCTCG
ACAGCGCAACGCAAGCCTCCGAAATCTACGAACCTTTGCACTACCATCAT
CGACCGTACGAAGCTCCCCAGCCTGCAAACCGACAATCACCAGCAAGTGG
CTCATCCGAGAATCTGCCGAAGCCACGCCCAGCCGCCAATCGTCGCTCGC
TTTCGACACACTCGCTCGGCTCCGACCTGGGTGAAAGACGGAGATCTTCT
CGGCTCTCCCCATACCTTCACGCCCGTGCATCATCCCGTGAATCCAGTGT
ATCTCCTGATGTCCGACCAGTATCCTTCGTTGAACAGCTTAACAGCTGCT
ATCCGCAACCCGGACCTGCCCCTGTTCAGATTGACAACTCCCATCTGCAA
TCTGCTGTCGGCAATAACGCATCGCTGCTGAGCCACAAGCAAACGTTCGA
CATGTATCTGGCAAATGTCAAGAAGACTGATGACCCCGCCATCCAGTATG
AGTTTGCCATCTTTATGGTGAATGCAATGTTGGAAATGCCTCCCGATGAG
GTCGACGGTGCATCCGCAGTGTATGGCCGGAAGGGAAGCGACATTAACCG
TGCTAGCCTTCTACGAGAGTCCAAATCCATCCTCCAGCGCCTGGCTGATC
GTAGCTATCCCTTTGCTCAATACTATCTGGCTGACGGATATGCTTCGGGG
TTGTTCAGCAAAGGGAAAGAGGACTATGACCGAGCGTTTCCACTGTTTCT
AGCAGCCAGTAAACACGGACATGTCGAAGCATGCTACCGGACTGCTTTGT
GCTATGAGTTTGGCTGGGGTACCCGAGTTGAAGCCGCCCGGGCACAGCAG
TTCTACCGCCAGGCAGCATCCAAAAACCACCCCGGCGCGATGCTACGTAT
GGCGAAGGCCTGTCTGGAGGGCGACATGGGGCTCGGAAAGCGCTATCGCG
AAGGCATCAAGTGGATGAAACGCGCTACAGATTCATCCGATGCTCAGTAT
AACTCTGCTCCTTACGAATTAGGATTAATGCATGAAACGGGATATGGCGA
TGACGTATTTCCAGACCCTGCTTATGCTGCCCAGCTGTTCACTAAAGCAG
CGGACTTAGGCCACATTGAGGCCAGCTATCGCTTGGGCGATGCCTACGAA
CACGGCAAACTCGAATGCCCCAGAGACCCTGCTTTGTCGATCCATTTCTA
TACCAACGCTGCACAGGGTGGCCACCCTCTGGCCATGATGGCACTGTGTG
CTTGGTACCTCATCGGAGCAGAGCCGGTGCTTGAAAAGGATGAATATGAA
GCCTACGAATGGGCTAAACGTGCCGCGGAGACTGGTAAGACCTGTAATGT
CTATCACGCAATCCATGGAATGCTGACGTTGCCGCAGGGCTCACCAAGGC
GCAATATGCGGTTGGATACTTTACGGAAACAGGAATTGGCTGTCGGCCAG
ACCACCTAGCAGCCAACGTTTGGTACGTGCAAGCAGCGGACCAAGGCGAC
ATCCGAGCTAAGCGCCGAATTGCCGCCATTCGAGCAGCTGTCGACGGGGT
TAATCCCGGGAAGGCCAGTGCAGCAGCTGCGGGCACTGGCCGCGGGCAGA
AGGAAAAGAAAGGTGCGTATGCCCTCTAAATTGTCACAACCTATCTAATG
AATGGCACAGACGGGAAATCGAAACGATTTGGTATATTTTAAGCATGGCA
TATCTTCAATGACCCTGAGAGGGTTCCGCATCTTGACAGCATCTTGACCA
ATTTACGTTCATCAGCACCATTTCACACATTTTTAGCGACAACGAACAGC
ACGAAGAAGTTTTGAGCACATTTGGGCATTTATTCTGGATTATACTGAGC
GATCCATTGATTCACGCGAACTCTGTTTCTCCTCAGCATTACTGGGATTG
GACCTGTACAAATTTTGTATCATCCATAATGATTTGCGGAGCATATAATC
AACTTGAGGATCATCATATCCTCCTTTTTAATGTTTT back to topCoding sequence (CDS) from alignment at ch3:2228591..2231877- >KJC3_003547-T1 ID=KJC3_003547-T1|Name=KJC3_003547-T1|organism=Aspergillus niger KJC3|type=CDS|length=6291bp|location=Sequence derived from alignment at ch3:2228591..2231877- (Aspergillus niger KJC3)
ACGGGAAATCGAAACGATTTGGTATATTTTAAGGCTCACCAAGGCGCAAT
ATGCGGTTGGATACTTTACGGAAACAGGAATTGGCTGTCGGCCAGACCAC
CTAGCAGCCAACGTTTGGTACGTGCAAGCAGCGGACCAAGGCGACATCCG
AGCTAAGCGCCGAATTGCCGCCATTCGAGCAGCTGTCGACGGGGTTAATC
CCGGGAAGGCCAGTGCAGCAGCTGCGGGCACTGGCCGCGGGCAGAAGGAA
AAGAAAGATGGAGCGCTCTGCCAGCGGCGGCTATCCCCAGCCGCTTTCTT
CCCCTCCGCCTGTTTACCTTCGTTCTTCTCCCCCCATTCCCCCGGTGCCC
CGTGAACCCCGCCGGGACAGCTTCAATCGCTTATACAGCAAGCCTATTCT
CAGGAAATCTCTGACAGATCCGGTGTCCATGCCGGAAGATCGCCCCGAAA
GCCAACGGTATTCGGTTCCACGGGTCAGAATCCATGGAGAAAGCGATCAG
CCAGTGCCGGAGTTTCATGAGGATGGTTTTGAAATGACGCTTCCCACTGA
TGAATTCGCCCAAATATCCCTCTCTGAGCAGCAGCAGACTCATGGAAAGA
CCATCGACGCATCATCCCCACCGGGGGTGGAAATCTTCAAAGCCGGCCAG
CTACCAGAGAATGCGGCTTACGGACACACGCCTCGTAGCAGTGCCTCTTG
GTCAGTAGTCGATCCTCACACAAAACATGATAGTCTCGCCAATACTAGCA
CGTCTTCCTTGGACCAACGACCTGCCAAGGACAGTCAGACCAGCTCTTCC
CGAGATAGTCTCGACAGCGCAACGCAAGCCTCCGAAATCTACGAACCTTT
GCACTACCATCATCGACCGTACGAAGCTCCCCAGCCTGCAAACCGACAAT
CACCAGCAAGTGGCTCATCCGAGAATCTGCCGAAGCCACGCCCAGCCGCC
AATCGTCGCTCGCTTTCGACACACTCGCTCGGCTCCGACCTGGGTGAAAG
ACGGAGATCTTCTCGGCTCTCCCCATACCTTCACGCCCGTGCATCATCCC
GTGAATCCAGTGTATCTCCTGATGTCCGACCAGTATCCTTCGTTGAACAG
CTTAACAGCTGCTATCCGCAACCCGGACCTGCCCCTGTTCAGATTGACAA
CTCCCATCTGCAATCTGCTGTCGGCAATAACGCATCGCTGCTGAGCCACA
AGCAAACGTTCGACATGTATCTGGCAAATGTCAAGAAGACTGATGACCCC
GCCATCCAGTATGAGTTTGCCATCTTTATGGTGAATGCAATGTTGGAAAT
GCCTCCCGATGAGGTCGACGGTGCATCCGCAGTGTATGGCCGGAAGGGAA
GCGACATTAACCGTGCTAGCCTTCTACGAGAGTCCAAATCCATCCTCCAG
CGCCTGGCTGATCGTAGCTATCCCTTTGCTCAATACTATCTGGCTGACGG
ATATGCTTCGGGGTTGTTCAGCAAAGGGAAAGAGGACTATGACCGAGCGT
TTCCACTGTTTCTAGCAGCCAGTAAACACGGACATGTCGAAGCATGCTAC
CGGACTGCTTTGTGCTATGAGTTTGGCTGGGGTACCCGAGTTGAAGCCGC
CCGGGCACAGCAGTTCTACCGCCAGGCAGCATCCAAAAACCACCCCGGCG
CGATGCTACGTATGGCGAAGGCCTGTCTGGAGGGCGACATGGGGCTCGGA
AAGCGCTATCGCGAAGGCATCAAGTGGATGAAACGCGCTACAGATTCATC
CGATGCTCAGTATAACTCTGCTCCTTACGAATTAGGATTAATGCATGAAA
CGGGATATGGCGATGACGTATTTCCAGACCCTGCTTATGCTGCCCAGCTG
TTCACTAAAGCAGCGGACTTAGGCCACATTGAGGCCAGCTATCGCTTGGG
CGATGCCTACGAACACGGCAAACTCGAATGCCCCAGAGACCCTGCTTTGT
CGATCCATTTCTATACCAACGCTGCACAGGGTGGCCACCCTCTGGCCATG
ATGGCACTGTGTGCTTGGTACCTCATCGGAGCAGAGCCGGTGCTTGAAAA
GGATGAATATGAAGCCTACGAATGGGCTAAACGTGCCGCGGAGACTGACG
GGAAATCGAAACGATTTGGTATATTTTAAGGCTCACCAAGGCGCAATATG
CGGTTGGATACTTTACGGAAACAGGAATTGGCTGTCGGCCAGACCACCTA
GCAGCCAACGTTTGGTACGTGCAAGCAGCGGACCAAGGCGACATCCGAGC
TAAGCGCCGAATTGCCGCCATTCGAGCAGCTGTCGACGGGGTTAATCCCG
GGAAGGCCAGTGCAGCAGCTGCGGGCACTGGCCGCGGGCAGAAGGAAAAG
AAAGATGGAGCGCTCTGCCAGCGGCGGCTATCCCCAGCCGCTTTCTTCCC
CTCCGCCTGTTTACCTTCGTTCTTCTCCCCCCATTCCCCCGGTGCCCCGT
GAACCCCGCCGGGACAGCTTCAATCGCTTATACAGCAAGCCTATTCTCAG
GAAATCTCTGACAGATCCGGTGTCCATGCCGGAAGATCGCCCCGAAAGCC
AACGGTATTCGGTTCCACGGGTCAGAATCCATGGAGAAAGCGATCAGCCA
GTGCCGGAGTTTCATGAGGATGGTTTTGAAATGACGCTTCCCACTGATGA
ATTCGCCCAAATATCCCTCTCTGAGCAGCAGCAGACTCATGGAAAGACCA
TCGACGCATCATCCCCACCGGGGGTGGAAATCTTCAAAGCCGGCCAGCTA
CCAGAGAATGCGGCTTACGGACACACGCCTCGTAGCAGTGCCTCTTGGTC
AGTAGTCGATCCTCACACAAAACATGATAGTCTCGCCAATACTAGCACGT
CTTCCTTGGACCAACGACCTGCCAAGGACAGTCAGACCAGCTCTTCCCGA
GATAGTCTCGACAGCGCAACGCAAGCCTCCGAAATCTACGAACCTTTGCA
CTACCATCATCGACCGTACGAAGCTCCCCAGCCTGCAAACCGACAATCAC
CAGCAAGTGGCTCATCCGAGAATCTGCCGAAGCCACGCCCAGCCGCCAAT
CGTCGCTCGCTTTCGACACACTCGCTCGGCTCCGACCTGGGTGAAAGACG
GAGATCTTCTCGGCTCTCCCCATACCTTCACGCCCGTGCATCATCCCGTG
AATCCAGTGTATCTCCTGATGTCCGACCAGTATCCTTCGTTGAACAGCTT
AACAGCTGCTATCCGCAACCCGGACCTGCCCCTGTTCAGATTGACAACTC
CCATCTGCAATCTGCTGTCGGCAATAACGCATCGCTGCTGAGCCACAAGC
AAACGTTCGACATGTATCTGGCAAATGTCAAGAAGACTGATGACCCCGCC
ATCCAGTATGAGTTTGCCATCTTTATGGTGAATGCAATGTTGGAAATGCC
TCCCGATGAGGTCGACGGTGCATCCGCAGTGTATGGCCGGAAGGGAAGCG
ACATTAACCGTGCTAGCCTTCTACGAGAGTCCAAATCCATCCTCCAGCGC
CTGGCTGATCGTAGCTATCCCTTTGCTCAATACTATCTGGCTGACGGATA
TGCTTCGGGGTTGTTCAGCAAAGGGAAAGAGGACTATGACCGAGCGTTTC
CACTGTTTCTAGCAGCCAGTAAACACGGACATGTCGAAGCATGCTACCGG
ACTGCTTTGTGCTATGAGTTTGGCTGGGGTACCCGAGTTGAAGCCGCCCG
GGCACAGCAGTTCTACCGCCAGGCAGCATCCAAAAACCACCCCGGCGCGA
TGCTACGTATGGCGAAGGCCTGTCTGGAGGGCGACATGGGGCTCGGAAAG
CGCTATCGCGAAGGCATCAAGTGGATGAAACGCGCTACAGATTCATCCGA
TGCTCAGTATAACTCTGCTCCTTACGAATTAGGATTAATGCATGAAACGG
GATATGGCGATGACGTATTTCCAGACCCTGCTTATGCTGCCCAGCTGTTC
ACTAAAGCAGCGGACTTAGGCCACATTGAGGCCAGCTATCGCTTGGGCGA
TGCCTACGAACACGGCAAACTCGAATGCCCCAGAGACCCTGCTTTGTCGA
TCCATTTCTATACCAACGCTGCACAGGGTGGCCACCCTCTGGCCATGATG
GCACTGTGTGCTTGGTACCTCATCGGAGCAGAGCCGGTGCTTGAAAAGGA
TGAATATGAAGCCTACGAATGGGCTAAACGTGCCGCGGAGACTGACGGGA
AATCGAAACGATTTGGTATATTTTAAGGCTCACCAAGGCGCAATATGCGG
TTGGATACTTTACGGAAACAGGAATTGGCTGTCGGCCAGACCACCTAGCA
GCCAACGTTTGGTACGTGCAAGCAGCGGACCAAGGCGACATCCGAGCTAA
GCGCCGAATTGCCGCCATTCGAGCAGCTGTCGACGGGGTTAATCCCGGGA
AGGCCAGTGCAGCAGCTGCGGGCACTGGCCGCGGGCAGAAGGAAAAGAAA
GATGGAGCGCTCTGCCAGCGGCGGCTATCCCCAGCCGCTTTCTTCCCCTC
CGCCTGTTTACCTTCGTTCTTCTCCCCCCATTCCCCCGGTGCCCCGTGAA
CCCCGCCGGGACAGCTTCAATCGCTTATACAGCAAGCCTATTCTCAGGAA
ATCTCTGACAGATCCGGTGTCCATGCCGGAAGATCGCCCCGAAAGCCAAC
GGTATTCGGTTCCACGGGTCAGAATCCATGGAGAAAGCGATCAGCCAGTG
CCGGAGTTTCATGAGGATGGTTTTGAAATGACGCTTCCCACTGATGAATT
CGCCCAAATATCCCTCTCTGAGCAGCAGCAGACTCATGGAAAGACCATCG
ACGCATCATCCCCACCGGGGGTGGAAATCTTCAAAGCCGGCCAGCTACCA
GAGAATGCGGCTTACGGACACACGCCTCGTAGCAGTGCCTCTTGGTCAGT
AGTCGATCCTCACACAAAACATGATAGTCTCGCCAATACTAGCACGTCTT
CCTTGGACCAACGACCTGCCAAGGACAGTCAGACCAGCTCTTCCCGAGAT
AGTCTCGACAGCGCAACGCAAGCCTCCGAAATCTACGAACCTTTGCACTA
CCATCATCGACCGTACGAAGCTCCCCAGCCTGCAAACCGACAATCACCAG
CAAGTGGCTCATCCGAGAATCTGCCGAAGCCACGCCCAGCCGCCAATCGT
CGCTCGCTTTCGACACACTCGCTCGGCTCCGACCTGGGTGAAAGACGGAG
ATCTTCTCGGCTCTCCCCATACCTTCACGCCCGTGCATCATCCCGTGAAT
CCAGTGTATCTCCTGATGTCCGACCAGTATCCTTCGTTGAACAGCTTAAC
AGCTGCTATCCGCAACCCGGACCTGCCCCTGTTCAGATTGACAACTCCCA
TCTGCAATCTGCTGTCGGCAATAACGCATCGCTGCTGAGCCACAAGCAAA
CGTTCGACATGTATCTGGCAAATGTCAAGAAGACTGATGACCCCGCCATC
CAGTATGAGTTTGCCATCTTTATGGTGAATGCAATGTTGGAAATGCCTCC
CGATGAGGTCGACGGTGCATCCGCAGTGTATGGCCGGAAGGGAAGCGACA
TTAACCGTGCTAGCCTTCTACGAGAGTCCAAATCCATCCTCCAGCGCCTG
GCTGATCGTAGCTATCCCTTTGCTCAATACTATCTGGCTGACGGATATGC
TTCGGGGTTGTTCAGCAAAGGGAAAGAGGACTATGACCGAGCGTTTCCAC
TGTTTCTAGCAGCCAGTAAACACGGACATGTCGAAGCATGCTACCGGACT
GCTTTGTGCTATGAGTTTGGCTGGGGTACCCGAGTTGAAGCCGCCCGGGC
ACAGCAGTTCTACCGCCAGGCAGCATCCAAAAACCACCCCGGCGCGATGC
TACGTATGGCGAAGGCCTGTCTGGAGGGCGACATGGGGCTCGGAAAGCGC
TATCGCGAAGGCATCAAGTGGATGAAACGCGCTACAGATTCATCCGATGC
TCAGTATAACTCTGCTCCTTACGAATTAGGATTAATGCATGAAACGGGAT
ATGGCGATGACGTATTTCCAGACCCTGCTTATGCTGCCCAGCTGTTCACT
AAAGCAGCGGACTTAGGCCACATTGAGGCCAGCTATCGCTTGGGCGATGC
CTACGAACACGGCAAACTCGAATGCCCCAGAGACCCTGCTTTGTCGATCC
ATTTCTATACCAACGCTGCACAGGGTGGCCACCCTCTGGCCATGATGGCA
CTGTGTGCTTGGTACCTCATCGGAGCAGAGCCGGTGCTTGAAAAGGATGA
ATATGAAGCCTACGAATGGGCTAAACGTGCCGCGGAGACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003547-T1.utr3p1 | KJC3_003547-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR006597 |
| DBxref | PFAM:PF08238 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2228591..2231877 - |
|
