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KJC3_003656-T1, KJC3_003656-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003656-T1
Unique NameKJC3_003656-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2531858..2532514-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003656-T1 ID=KJC3_003656-T1|Name=KJC3_003656-T1|organism=Aspergillus niger KJC3|type=mRNA|length=657bp|location=Sequence derived from alignment at ch3:2531858..2532514- (Aspergillus niger KJC3)
CGCTCCGGACAGGGTACACAGTCAAGATGATTCAATTAAAGGTGTGTGTG
CGATTCTACTGGTGTTCATGATGCGGGGGAAAGGAATTTTTATCGGACTG
ACAAGCCCCGATCCAGACAATGCTTAACTGCATCGACAACTCCGGCGCCG
CCGTTGTCGAGTGCGTGAATGTCCTGAAGAAGAAGCGCCCCGCCACCGTT
GGTACGATAACCCGCTCTTTTCCATTCACTATTCAAAGGAATAACACTGA
TGTTGGGGTTCCGGGATGAACAGGTGACCGCATCGTGGTCGTGGTCCAGA
AGCAACGAAATTTCGGCCCCGACAGCAGCAACAACGTCGGTATTGCAAAC
AAGGTTCGCCGAGGAGACATTCGCCATGCCGTCGTCGTCCGCGCGGCCAA
GGAAATGCAGCGTCCGGATGGTTCGATCGTCAAGTTCGATGATAACGCCT
GTGTTCTCGTCAACAAGTCCGGAGACCCCATCGGAACAAGAATGAACGGT
CAGTCTAGGCGTACAGACTACGGCATCACATGGAAAGGATTGGAACGTCT
TTACTGACATATACTAGGTGTCGTGGCTACGGAACTACGAGGACGACAGT
GGTCGAAGATCCTGTCGTTGGCGCCGATGCATGTGTAGGATATACCATTT
TTGGAAG
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Coding sequence (CDS) from alignment at ch3:2531858..2532514-

>KJC3_003656-T1 ID=KJC3_003656-T1|Name=KJC3_003656-T1|organism=Aspergillus niger KJC3|type=CDS|length=1584bp|location=Sequence derived from alignment at ch3:2531858..2532514- (Aspergillus niger KJC3)
GTGTCGTGGCTACGGAACTACGAGGACGACAGTGGTCGAAGATCCTGTCG
TTGGCGCCGATGCATGTGTAGGTGACCGCATCGTGGTCGTGGTCCAGAAG
CAACGAAATTTCGGCCCCGACAGCAGCAACAACGTCGGTATTGCAAACAA
GGTTCGCCGAGGAGACATTCGCCATGCCGTCGTCGTCCGCGCGGCCAAGG
AAATGCAGCGTCCGGATGGTTCGATCGTCAAGTTCGATGATAACGCCTGT
GTTCTCGTCAACAAGTCCGGAGACCCCATCGGAACAAGAATGAACGACAA
TGCTTAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAAT
GTCCTGAAGAAGAAGCGCCCCGCCACCGTTGATGATTCAATTAAAGGTGT
CGTGGCTACGGAACTACGAGGACGACAGTGGTCGAAGATCCTGTCGTTGG
CGCCGATGCATGTGTAGGTGACCGCATCGTGGTCGTGGTCCAGAAGCAAC
GAAATTTCGGCCCCGACAGCAGCAACAACGTCGGTATTGCAAACAAGGTT
CGCCGAGGAGACATTCGCCATGCCGTCGTCGTCCGCGCGGCCAAGGAAAT
GCAGCGTCCGGATGGTTCGATCGTCAAGTTCGATGATAACGCCTGTGTTC
TCGTCAACAAGTCCGGAGACCCCATCGGAACAAGAATGAACGACAATGCT
TAACTGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAATGTCC
TGAAGAAGAAGCGCCCCGCCACCGTTGATGATTCAATTAAAGGTGTCGTG
GCTACGGAACTACGAGGACGACAGTGGTCGAAGATCCTGTCGTTGGCGCC
GATGCATGTGTAGGTGACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAA
TTTCGGCCCCGACAGCAGCAACAACGTCGGTATTGCAAACAAGGTTCGCC
GAGGAGACATTCGCCATGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAG
CGTCCGGATGGTTCGATCGTCAAGTTCGATGATAACGCCTGTGTTCTCGT
CAACAAGTCCGGAGACCCCATCGGAACAAGAATGAACGACAATGCTTAAC
TGCATCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAATGTCCTGAA
GAAGAAGCGCCCCGCCACCGTTGATGATTCAATTAAAGGTGTCGTGGCTA
CGGAACTACGAGGACGACAGTGGTCGAAGATCCTGTCGTTGGCGCCGATG
CATGTGTAGGTGACCGCATCGTGGTCGTGGTCCAGAAGCAACGAAATTTC
GGCCCCGACAGCAGCAACAACGTCGGTATTGCAAACAAGGTTCGCCGAGG
AGACATTCGCCATGCCGTCGTCGTCCGCGCGGCCAAGGAAATGCAGCGTC
CGGATGGTTCGATCGTCAAGTTCGATGATAACGCCTGTGTTCTCGTCAAC
AAGTCCGGAGACCCCATCGGAACAAGAATGAACGACAATGCTTAACTGCA
TCGACAACTCCGGCGCCGCCGTTGTCGAGTGCGTGAATGTCCTGAAGAAG
AAGCGCCCCGCCACCGTTGATGATTCAATTAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003656KJC3_003656Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003656-T1KJC3_003656-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003656-T1.cdsKJC3_003656-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003656-T1.utr3p1KJC3_003656-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003656-T1.exon4KJC3_003656-T1.exon4Aspergillus niger KJC3exon
KJC3_003656-T1.exon3KJC3_003656-T1.exon3Aspergillus niger KJC3exon
KJC3_003656-T1.exon2KJC3_003656-T1.exon2Aspergillus niger KJC3exon
KJC3_003656-T1.exon1KJC3_003656-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003656-T1.utr5p1KJC3_003656-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265HP0
DBxrefInterPro:IPR019972
DBxrefInterPro:IPR005745
DBxrefInterPro:IPR036853
DBxrefInterPro:IPR000218
DBxrefPFAM:PF00238
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2531858..2532514 -
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