|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3145112..3146300+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003821-T1 ID=KJC3_003821-T1|Name=KJC3_003821-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1189bp|location=Sequence derived from alignment at ch3:3145112..3146300+ (Aspergillus niger KJC3)
ATCACATCTTCATCGCAAACTCTCATATTATTCGCCTGCTATAAAATCAA
ACTGAGATGTCCTTCCCATCATGATTACTACCTCCACGTTTACCCTCGAA
GTGTCTTGTGCAGTCTGTCCGCATTCGGATCCAGAACCGCAGCTTCAAGA
AATCGGTTACATCACTGCACCGACATCTTAGACCATTGGACTCGGCCAAA
ACCCCCATCGAACTTCTCCTCTCCATTCTGAGAGCGACAAGAGCGAGTCT
GTATCTTCCTCATCTGTAGCAAGTAGTTTCAATAAGTTCAACGGCATCAT
GGGCTTCGAGAATGGGACTAAGCCCGCGGTGGTCTGCGTATTGTAAGTCA
CCAGCATATCATATCATATCATCTCCAGCCCTCACCCCGCATACTCAATC
CTTTCGCCACCAACCACGAAATTTATAACGAAACTCCCAAACTAACCAAC
CCATTACAGCTGCGGCTCCGTCTCCGGCACAAACCCTCGCCATATGGAAG
CCGCGCGCCAGCTGGCGCACGAATTCCACAAGAACAACATCCACCTTGTG
TACGGCGGCGGCACAGCAGGCCTAATGGGCACAATAGCCCGCGAGCTGGT
CAAACTATCCGGCCCGCAGGCCGTGCACGGCGTGATCCCCCGCGCATTAG
TAAAGGTAGAACCGGGATACGACAATGCAACGGAACATCCCACAGACACA
GATTCAACTACAGGAATCCAGCAAGCGCGGTCCGGTAAGGACGCGGAACG
AATCATCCCAGCCGCTACTACCAATGGAACTACTACAAAGGCGAAGGAAT
CTATGTTTAAGGAATCCGAGTACGGGACGACCACGATTGTGGCGGATATG
CATGCGCGAAAGCGGCTTATGGCGACGAAGGTGCAGGAGGGAGGGCCTGG
GTCTGGGTTTGTGGCGTTGGCGGGGGGGTTCGGGACGATTGAGGAGGTGA
TGGAGATGACGACGTGGAATCAGTTGGGTATTCATGGGGCTGGGGTGGTG
GTGGTTAATGTGGATGGGTATTGGGATGGGGTGTTGGCGTGGGTGAGGAA
GGCGGTGCAGGAGGGGTACATTGGTGAGGAGAATGGGAGGATCTTGGTGG
AGGTGAATGATATTAAGGATGTTTGGCCGCGGTTGAAAGGGTATAGGGTT
AGTAATGGGAGGATGAGGTTGAATTGGGGGGAAGAATAA back to topCoding sequence (CDS) from alignment at ch3:3145112..3146300+ >KJC3_003821-T1 ID=KJC3_003821-T1|Name=KJC3_003821-T1|organism=Aspergillus niger KJC3|type=CDS|length=1548bp|location=Sequence derived from alignment at ch3:3145112..3146300+ (Aspergillus niger KJC3)
ATGGGCTTCGAGAATGGGACTAAGCCCGCGGTGGTCTGCGTATTCTGCGG
CTCCGTCTCCGGCACAAACCCTCGCCATATGGAAGCCGCGCGCCAGCTGG
CGCACGAATTCCACAAGAACAACATCCACCTTGTGTACGGCGGCGGCACA
GCAGGCCTAATGGGCACAATAGCCCGCGAGCTGGTCAAACTATCCGGCCC
GCAGGCCGTGCACGGCGTGATCCCCCGCGCATTAGTAAAGGTAGAACCGG
GATACGACAATGCAACGGAACATCCCACAGACACAGATTCAACTACAGGA
ATCCAGCAAGCGCGGTCCGGTAAGGACGCGGAACGAATCATCCCAGCCGC
TACTACCAATGGAACTACTACAAAGGCGAAGGAATCTATGTTTAAGGAAT
CCGAGTACGGGACGACCACGATTGTGGCGGATATGCATGCGCGAAAGCGG
CTTATGGCGACGAAGGTGCAGGAGGGAGGGCCTGGGTCTGGGTTTGTGGC
GTTGGCGGGGGGGTTCGGGACGATTGAGGAGGTGATGGAGATGACGACGT
GGAATCAGTTGGGTATTCATGGGGCTGGGGTGGTGGTGGTTAATGTGGAT
GGGTATTGGGATGGGGTGTTGGCGTGGGTGAGGAAGGCGGTGCAGGAGGG
GTACATTGGTGAGGAGAATGGGAGGATCTTGGTGGAGGTGAATGATATTA
AGGATGTTTGGCCGCGGTTGAAAGGGTATAGGGTTAGTAATGGGAGGATG
AGGTTGAATTGGGGGGAAGAATAAATGGGCTTCGAGAATGGGACTAAGCC
CGCGGTGGTCTGCGTATTCTGCGGCTCCGTCTCCGGCACAAACCCTCGCC
ATATGGAAGCCGCGCGCCAGCTGGCGCACGAATTCCACAAGAACAACATC
CACCTTGTGTACGGCGGCGGCACAGCAGGCCTAATGGGCACAATAGCCCG
CGAGCTGGTCAAACTATCCGGCCCGCAGGCCGTGCACGGCGTGATCCCCC
GCGCATTAGTAAAGGTAGAACCGGGATACGACAATGCAACGGAACATCCC
ACAGACACAGATTCAACTACAGGAATCCAGCAAGCGCGGTCCGGTAAGGA
CGCGGAACGAATCATCCCAGCCGCTACTACCAATGGAACTACTACAAAGG
CGAAGGAATCTATGTTTAAGGAATCCGAGTACGGGACGACCACGATTGTG
GCGGATATGCATGCGCGAAAGCGGCTTATGGCGACGAAGGTGCAGGAGGG
AGGGCCTGGGTCTGGGTTTGTGGCGTTGGCGGGGGGGTTCGGGACGATTG
AGGAGGTGATGGAGATGACGACGTGGAATCAGTTGGGTATTCATGGGGCT
GGGGTGGTGGTGGTTAATGTGGATGGGTATTGGGATGGGGTGTTGGCGTG
GGTGAGGAAGGCGGTGCAGGAGGGGTACATTGGTGAGGAGAATGGGAGGA
TCTTGGTGGAGGTGAATGATATTAAGGATGTTTGGCCGCGGTTGAAAGGG
TATAGGGTTAGTAATGGGAGGATGAGGTTGAATTGGGGGGAAGAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003821-T1.utr5p1 | KJC3_003821-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR031100 |
| DBxref | InterPro:IPR005269 |
| DBxref | PFAM:PF03641 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3145112..3146300 + |
|
