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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3555337..3556635+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003968-T1 ID=KJC3_003968-T1|Name=KJC3_003968-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1299bp|location=Sequence derived from alignment at ch3:3555337..3556635+ (Aspergillus niger KJC3)
CATCCTCACAATATTATCCCGAGGTAAAGACAAATCATGTCCAAACTCAG
AATTCTCATCTGCGGCGCAGGCATCGCCGGTAACGCCCTTGCCTTTTGGC
TATCCAAACTCGGCCACATCATCACAGTCATCGAGCGATACCCTGGTTTA
CGAGCCACCGGACTCCAGGTCGATCTCCGCAGCCCTGGCATTGAAGTCGT
CCAACGAATGGGTCTCGAGAAAGCCTTTCGCAAGGTCACCGTCCCAGAAC
AAGGTCTACAGCTTGTTGACAGCCGCAACCGGCGATGGGGGTATTTCCCT
GCTAATCGAAGTGGGAAGGGATTGCAGAGCTTTACTACCGACTACGAAAT
CATGAGAGGCGATCTGTGCCATCTGCTTCATGACGCTGTTAAGGATCGCG
TGGAGTATTTGTTCGGAATGTATGTCATGGAAATGCAGCAGACGGATAAT
TTTGTCGACGTGGTCTTGTCCGATGGGAGGAAAGAGCGATTTGATCTTGT
TGTTGGTGCGGATGGTCTGGGTTCTCGTATGAGGACCATGATGCTTGGGG
GTGGGGATGATGATAGAGATTCGGTTCACTCGATTGGGGTCTCTGCTGGG
TATTTCACGATTGATAGGGAATTGGAGAAGGGGGAGGGATATGATGCAAC
GGTGTATATGACTACGCAGGGGCGTGGGATCATGATGCGTCGTCATAACC
CGCACAAGATTCAGGCGTATATGTTCTGCAAGGCGGGGCCTTTTGAGAAC
TGCAGCAAGGGCGATGTTGAGCGGGAGAAGCAGGTTTTGGGCCAGGTCTT
TCGGGATGCAGGGTGGAAGTCTGAGGAGATCATCAGAGGTATGGAAGAGG
CGGACGATTTCTATTGTGAGCGCATGGGGGTGGTGAATCTGGATAGCTGG
TCGCGAGGCCGTGTTGTTTTGGTCGGAGATGCGGCTTATTGTCCGTCTGC
TATGACAGGAATGGGCACGCCGTGTGCCATGGTTGGTGCTTACATTCTGG
CAGGGGAGATAGGAAACCGTTGTGCGAAGGGGATTGGTTCCAAGGAGGAC
ATCGCGGAGGCTTTCAAAACTTATGAGGACAAGCTCAAGCCCTTCATGTT
GAACGTCCAAAAGGGACTCATGGACGATCACGATTACATGAGCAGGCTCC
CTTCATCTACTTTGGGGATCACTGTGGTGTATATCCTGTTTGCAATAGCC
TCGTTCTTGAGACTGGACGTCCTCTCGCAATGGGTGTTGCGCGAAGATTG
CAACAAGGACTGGAAACTGCCAGAGTATCCGATCATGGTCGACAACTGA back to topCoding sequence (CDS) from alignment at ch3:3555337..3556635+ >KJC3_003968-T1 ID=KJC3_003968-T1|Name=KJC3_003968-T1|organism=Aspergillus niger KJC3|type=CDS|length=1263bp|location=Sequence derived from alignment at ch3:3555337..3556635+ (Aspergillus niger KJC3)
ATGTCCAAACTCAGAATTCTCATCTGCGGCGCAGGCATCGCCGGTAACGC
CCTTGCCTTTTGGCTATCCAAACTCGGCCACATCATCACAGTCATCGAGC
GATACCCTGGTTTACGAGCCACCGGACTCCAGGTCGATCTCCGCAGCCCT
GGCATTGAAGTCGTCCAACGAATGGGTCTCGAGAAAGCCTTTCGCAAGGT
CACCGTCCCAGAACAAGGTCTACAGCTTGTTGACAGCCGCAACCGGCGAT
GGGGGTATTTCCCTGCTAATCGAAGTGGGAAGGGATTGCAGAGCTTTACT
ACCGACTACGAAATCATGAGAGGCGATCTGTGCCATCTGCTTCATGACGC
TGTTAAGGATCGCGTGGAGTATTTGTTCGGAATGTATGTCATGGAAATGC
AGCAGACGGATAATTTTGTCGACGTGGTCTTGTCCGATGGGAGGAAAGAG
CGATTTGATCTTGTTGTTGGTGCGGATGGTCTGGGTTCTCGTATGAGGAC
CATGATGCTTGGGGGTGGGGATGATGATAGAGATTCGGTTCACTCGATTG
GGGTCTCTGCTGGGTATTTCACGATTGATAGGGAATTGGAGAAGGGGGAG
GGATATGATGCAACGGTGTATATGACTACGCAGGGGCGTGGGATCATGAT
GCGTCGTCATAACCCGCACAAGATTCAGGCGTATATGTTCTGCAAGGCGG
GGCCTTTTGAGAACTGCAGCAAGGGCGATGTTGAGCGGGAGAAGCAGGTT
TTGGGCCAGGTCTTTCGGGATGCAGGGTGGAAGTCTGAGGAGATCATCAG
AGGTATGGAAGAGGCGGACGATTTCTATTGTGAGCGCATGGGGGTGGTGA
ATCTGGATAGCTGGTCGCGAGGCCGTGTTGTTTTGGTCGGAGATGCGGCT
TATTGTCCGTCTGCTATGACAGGAATGGGCACGCCGTGTGCCATGGTTGG
TGCTTACATTCTGGCAGGGGAGATAGGAAACCGTTGTGCGAAGGGGATTG
GTTCCAAGGAGGACATCGCGGAGGCTTTCAAAACTTATGAGGACAAGCTC
AAGCCCTTCATGTTGAACGTCCAAAAGGGACTCATGGACGATCACGATTA
CATGAGCAGGCTCCCTTCATCTACTTTGGGGATCACTGTGGTGTATATCC
TGTTTGCAATAGCCTCGTTCTTGAGACTGGACGTCCTCTCGCAATGGGTG
TTGCGCGAAGATTGCAACAAGGACTGGAAACTGCCAGAGTATCCGATCAT
GGTCGACAACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003968-T1.utr5p1 | KJC3_003968-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.6 |
| Note | SMCOG1087:hypothetical protein |
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3555337..3556635 + |
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