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KJC3_003978-T1, KJC3_003978-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003978-T1
Unique NameKJC3_003978-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3586103..3588284+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003978-T1 ID=KJC3_003978-T1|Name=KJC3_003978-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2182bp|location=Sequence derived from alignment at ch3:3586103..3588284+ (Aspergillus niger KJC3)
CTTCCCTTTTCGATATACTCCTATCAGCGCGGTAAGTACTAGTCTATGTG
GAGTATAAGCCGAAAAGACTAATATAGCGTTATACTAAGTTACCTAATAT
TCACTAGACTGGACGAACCAGCCATCGTCGGGTAGTTTACTACTCCACTT
GAAGCTGGCTGTGCTTCTAGGCATGAATTGAAGAGCTGACACTATTAGGC
AATGCGATAATATCATTTCACATGCAGTGGGGTCTGTACAAAAACAATTC
GGATACGCGATCCGTCATGTCAGCCCGGAGCCTCGTTGTTGCAAGGCAGA
TTTAGCAAGCTATCCGTTCATCAGCTGCTCAAACTTGCGCCGCATTCTCA
GTAAGTCGCCAAGCTCCCTGCAAGCCCAGAATCAGCTCTGAACACTGTCT
ACCCAAATATATCCTGCATATTAGTAGAACACCATCCATGTCAATTGACA
CTAGGAATAATCTCGTGTCAGTAACGAGGATTAATAACCTATCATAGATT
TCACCACAAAATGACATCGTCACAACCGCCTTTGAACATTGTTGTAGTAA
GCTTTACCTACGCTTCCAGTTACACGGAACCAAGGCATCGTTGACAACTC
ATGTTTCGCAGATCGGAGGCTCTCTGGCGGGGCTAATGACCGCCGTGGCG
CTGAAGCAAAACGGTCATAATGTGACAGTCATTGAAAAGGAAGACAATGA
ACGCGAAAGCCACATGGCTGGCGTTTGTCTAGGACTCGATGCTGTGGAAT
TTCTCGAAAAATACGATCGCATTCAGGGCATCTTCTCCCACCAGTCGCGT
CGTATTCAGGCCCTTGTGGGCGACGACAAGCTGAAGACCTTTGTCAATGG
CCGTCGAGAAATCACAAACTGGGATACCATGTACTACCGGCTTCGTTGTA
ACTTTGATGGCTATGCAAGCGATACCTACCCTACATCCCCTTTGCCCTCT
CCAGAAGATGGCCAGGGTGTGTATCTTGCTCAAACGGAGGTTCTCGATAT
TCAACGTGAAATACAACCTGACGACGACGATGACAGCGACGAGAAGAAGA
CGACAATGAGCCTCACGTTGCTGGACCGCAAATCAGGAGACAAGGCCACT
ATGCAGGCCGACCTGGTGATTGGTGCAGACGGCCCGGATTCTTTTGTGCG
GAAGAAGTACCAAGGCCACGTTGAGCGGAAATACGTTGGCTACATTGCTT
GGAGGGGCACTGTCCCGGAGAGTGAGGTGTCGGAAGAAACCCGTCACCTC
TTCAGACGCAGCGTCACTGTGTATATGATGGACAAACAGCACTGCATCGT
GTACACCATCCCCGGCAAGAACGGATCGCTGGAGCCCGGCGAAAGGTATC
TCAACTTCCTCTGGTACACAAACGAGACGAAGGAATCCTTGGACGAAATC
TTAAAGGACGGCCTCGACGGCCATCGCCATCACAACATTGTCCCGTCCGG
TCGTGTGCGACAAGATATCTGGGCTGAACGAACAAGGCAAGCCAAAGCCC
TGCCACTCAGCAAGCCAATGCTGGAGATCTTTCTGAAGATCCAGCGTCCT
TTTATTCAGGTCATTACCGACTTCTGCTCACATCAGGCAGCCTTTGAAGA
TGGCAAGGTCCTGCTGGTTGGCGACGGACTGTCGCTGTTCCGTCCGCACA
CAGCCTTCAGCGGCACCCAGGCGGCGTTTCATGCCCTCCGCACGGCTGAG
TTCGTCAATGGCAAGACAACCCTGCAACAGTGGGAGAGCAAGGTCCTTAG
GTACTCGCGGCTGCACTACCTGCAGAGCAACTGGTATGGAGACTTCTACC
AATACCCCATCTCGACGGCCCTCGTGGCTGCTGTGCGCTACTGGATTATG
TGCGGCGTGGATCGCGTCTTGTCCTGGTACAACGGCGATGCTCCGCTCTT
GCGCACAAGCACATTCAAGAGTGAAGCGTACGACGACGAATAAAGTAGGC
CGAGGAATAGCCTCATTCGATTAGGGAGGTGTCGTTCCACCCCATACTGG
ACGTCTACAGTAACTAGGAGGTCAAGTAGGTGGGATGAGTATCTCAACGG
AAATTGTGAAGTTGACACAGGCATAGGCTACTAGCAAAAGGGACATTGAC
ATAATAGCCAATAACCTCATGTTTAGTTAGCTTCGATTGTATATAACCAT
ATATTAATCAGCAATACTTTCTACAATTCGAG
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Coding sequence (CDS) from alignment at ch3:3586103..3588284+

>KJC3_003978-T1 ID=KJC3_003978-T1|Name=KJC3_003978-T1|organism=Aspergillus niger KJC3|type=CDS|length=2736bp|location=Sequence derived from alignment at ch3:3586103..3588284+ (Aspergillus niger KJC3)
ATGACATCGTCACAACCGCCTTTGAACATTGTTGTAATCGGAGGCTCTCT
GGCGGGGCTAATGACCGCCGTGGCGCTGAAGCAAAACGGTCATAATGTGA
CAGTCATTGAAAAGGAAGACAATGAACGCGAAAGCCACATGGCTGGCGTT
TGTCTAGGACTCGATGCTGTGGAATTTCTCGAAAAATACGATCGCATTCA
GGGCATCTTCTCCCACCAGTCGCGTCGTATTCAGGCCCTTGTGGGCGACG
ACAAGCTGAAGACCTTTGTCAATGGCCGTCGAGAAATCACAAACTGGGAT
ACCATGTACTACCGGCTTCGTTGTAACTTTGATGGCTATGCAAGCGATAC
CTACCCTACATCCCCTTTGCCCTCTCCAGAAGATGGCCAGGGTGTGTATC
TTGCTCAAACGGAGGTTCTCGATATTCAACGTGAAATACAACCTGACGAC
GACGATGACAGCGACGAGAAGAAGACGACAATGAGCCTCACGTTGCTGGA
CCGCAAATCAGGAGACAAGGCCACTATGCAGGCCGACCTGGTGATTGGTG
CAGACGGCCCGGATTCTTTTGTGCGGAAGAAGTACCAAGGCCACGTTGAG
CGGAAATACGTTGGCTACATTGCTTGGAGGGGCACTGTCCCGGAGAGTGA
GGTGTCGGAAGAAACCCGTCACCTCTTCAGACGCAGCGTCACTGTGTATA
TGATGGACAAACAGCACTGCATCGTGTACACCATCCCCGGCAAGAACGGA
TCGCTGGAGCCCGGCGAAAGGTATCTCAACTTCCTCTGGTACACAAACGA
GACGAAGGAATCCTTGGACGAAATCTTAAAGGACGGCCTCGACGGCCATC
GCCATCACAACATTGTCCCGTCCGGTCGTGTGCGACAAGATATCTGGGCT
GAACGAACAAGGCAAGCCAAAGCCCTGCCACTCAGCAAGCCAATGCTGGA
GATCTTTCTGAAGATCCAGCGTCCTTTTATTCAGGTCATTACCGACTTCT
GCTCACATCAGGCAGCCTTTGAAGATGGCAAGGTCCTGCTGGTTGGCGAC
GGACTGTCGCTGTTCCGTCCGCACACAGCCTTCAGCGGCACCCAGGCGGC
GTTTCATGCCCTCCGCACGGCTGAGTTCGTCAATGGCAAGACAACCCTGC
AACAGTGGGAGAGCAAGGTCCTTAGGTACTCGCGGCTGCACTACCTGCAG
AGCAACTGGTATGGAGACTTCTACCAATACCCCATCTCGACGGCCCTCGT
GGCTGCTGTGCGCTACTGGATTATGTGCGGCGTGGATCGCGTCTTGTCCT
GGTACAACGGCGATGCTCCGCTCTTGCGCACAAGCACATTCAAGAGTGAA
GCGTACGACGACGAATAAATGACATCGTCACAACCGCCTTTGAACATTGT
TGTAATCGGAGGCTCTCTGGCGGGGCTAATGACCGCCGTGGCGCTGAAGC
AAAACGGTCATAATGTGACAGTCATTGAAAAGGAAGACAATGAACGCGAA
AGCCACATGGCTGGCGTTTGTCTAGGACTCGATGCTGTGGAATTTCTCGA
AAAATACGATCGCATTCAGGGCATCTTCTCCCACCAGTCGCGTCGTATTC
AGGCCCTTGTGGGCGACGACAAGCTGAAGACCTTTGTCAATGGCCGTCGA
GAAATCACAAACTGGGATACCATGTACTACCGGCTTCGTTGTAACTTTGA
TGGCTATGCAAGCGATACCTACCCTACATCCCCTTTGCCCTCTCCAGAAG
ATGGCCAGGGTGTGTATCTTGCTCAAACGGAGGTTCTCGATATTCAACGT
GAAATACAACCTGACGACGACGATGACAGCGACGAGAAGAAGACGACAAT
GAGCCTCACGTTGCTGGACCGCAAATCAGGAGACAAGGCCACTATGCAGG
CCGACCTGGTGATTGGTGCAGACGGCCCGGATTCTTTTGTGCGGAAGAAG
TACCAAGGCCACGTTGAGCGGAAATACGTTGGCTACATTGCTTGGAGGGG
CACTGTCCCGGAGAGTGAGGTGTCGGAAGAAACCCGTCACCTCTTCAGAC
GCAGCGTCACTGTGTATATGATGGACAAACAGCACTGCATCGTGTACACC
ATCCCCGGCAAGAACGGATCGCTGGAGCCCGGCGAAAGGTATCTCAACTT
CCTCTGGTACACAAACGAGACGAAGGAATCCTTGGACGAAATCTTAAAGG
ACGGCCTCGACGGCCATCGCCATCACAACATTGTCCCGTCCGGTCGTGTG
CGACAAGATATCTGGGCTGAACGAACAAGGCAAGCCAAAGCCCTGCCACT
CAGCAAGCCAATGCTGGAGATCTTTCTGAAGATCCAGCGTCCTTTTATTC
AGGTCATTACCGACTTCTGCTCACATCAGGCAGCCTTTGAAGATGGCAAG
GTCCTGCTGGTTGGCGACGGACTGTCGCTGTTCCGTCCGCACACAGCCTT
CAGCGGCACCCAGGCGGCGTTTCATGCCCTCCGCACGGCTGAGTTCGTCA
ATGGCAAGACAACCCTGCAACAGTGGGAGAGCAAGGTCCTTAGGTACTCG
CGGCTGCACTACCTGCAGAGCAACTGGTATGGAGACTTCTACCAATACCC
CATCTCGACGGCCCTCGTGGCTGCTGTGCGCTACTGGATTATGTGCGGCG
TGGATCGCGTCTTGTCCTGGTACAACGGCGATGCTCCGCTCTTGCGCACA
AGCACATTCAAGAGTGAAGCGTACGACGACGAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003978KJC3_003978Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003978-T1KJC3_003978-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003978-T1.utr5p1KJC3_003978-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_003978-T1.utr5p2KJC3_003978-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003978-T1.utr5p3KJC3_003978-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003978-T1.exon1KJC3_003978-T1.exon1Aspergillus niger KJC3exon
KJC3_003978-T1.exon2KJC3_003978-T1.exon2Aspergillus niger KJC3exon
KJC3_003978-T1.exon3KJC3_003978-T1.exon3Aspergillus niger KJC3exon
KJC3_003978-T1.exon4KJC3_003978-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003978-T1.cdsKJC3_003978-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003978-T1.utr3p1KJC3_003978-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_3.6
NoteSMCOG1087:hypothetical protein
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR003953
DBxrefInterPro:IPR002938
DBxrefPFAM:PF00070
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3586103..3588284 +
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