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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3666331..3667212- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004011-T1 ID=KJC3_004011-T1|Name=KJC3_004011-T1|organism=Aspergillus niger KJC3|type=mRNA|length=882bp|location=Sequence derived from alignment at ch3:3666331..3667212- (Aspergillus niger KJC3)
CCTAACTTGGACCCGCGCACTAGCCCTTACAATCCAATCCCCAGCATCAC
TATCTCTATCACCATGTCTCAATAAATCGTCAACAATAGTATCTAAAATG
ACCACCCATTCAAGCTCTCCCTTCCATCTCCGCCCCGCCAAATCCACCCC
CACCGACCACGCCTTCATCCTGTCTGCCTTCGACTCTTCCCTCCCCCTCC
TGGCCTCCATCGGCAGCCACGAACAATGGGGCTCAACTCCCTTCTCCCAA
CGAGGAGACTTCCCCCAAGAAACCCTAAAAGAACTTGACCAATCCGAAGA
ATATCGCCTAACAGGCAAGAGCAACATGGACAGTCTACGCATCTTCATTG
TTGAAAGAGAATACCACCACGATGATGAGGAGCATACAGAGTCTCTCTCA
TCCCACCTGCGAGTTACGTCCGACGGTCAATGCTTCCTTCCAGTAGGGTT
TGCCTATGTTCGCGAGAATTGGATTCCTAAGTATGTGAAATCACAACATC
ACCTTCCGATGCCAGTCATCCATAGTAGTTCTGAAATTGGTGGGTTTCTC
TATCTCGAGGTTATGGTTACGGATAGTCGCGTGGGTCGGCTCTGTCGCGG
GGCCGGAGCGGCGCTTATCAGGGGCATGAGGGAGTATGGGCAAGGAAGAG
GGATGAAGGCCCTATGGGTGGATGGATGGGCGGGAAATGAGAGAAAATTG
ATCAGGTTTGTTCTATTTTTATCCTCTCTTCTTTTTTTTTTTTGAGATTA
AGTTGTTGGAGGTGTTAACATATCTGTAATAGGTACTATGAACAGCAAGG
GTTCCGAGCTGTCGGGGATTGGAGTCATACCAGGGCGAACAATGTGCCGT
GGTTGGGGACGTTGATGTGCATGGATATCTAG back to topCoding sequence (CDS) from alignment at ch3:3666331..3667212- >KJC3_004011-T1 ID=KJC3_004011-T1|Name=KJC3_004011-T1|organism=Aspergillus niger KJC3|type=CDS|length=1416bp|location=Sequence derived from alignment at ch3:3666331..3667212- (Aspergillus niger KJC3)
GTACTATGAACAGCAAGGGTTCCGAGCTGTCGGGGATTGGAGTCATACCA
GGGCGAACAATGTGCCGTGGTTGGGGACGTTGATGTGCATGGATATCTAG
ATGACCACCCATTCAAGCTCTCCCTTCCATCTCCGCCCCGCCAAATCCAC
CCCCACCGACCACGCCTTCATCCTGTCTGCCTTCGACTCTTCCCTCCCCC
TCCTGGCCTCCATCGGCAGCCACGAACAATGGGGCTCAACTCCCTTCTCC
CAACGAGGAGACTTCCCCCAAGAAACCCTAAAAGAACTTGACCAATCCGA
AGAATATCGCCTAACAGGCAAGAGCAACATGGACAGTCTACGCATCTTCA
TTGTTGAAAGAGAATACCACCACGATGATGAGGAGCATACAGAGTCTCTC
TCATCCCACCTGCGAGTTACGTCCGACGGTCAATGCTTCCTTCCAGTAGG
GTTTGCCTATGTTCGCGAGAATTGGATTCCTAAGTATGTGAAATCACAAC
ATCACCTTCCGATGCCAGTCATCCATAGTAGTTCTGAAATTGGTGGGTTT
CTCTATCTCGAGGTTATGGTTACGGATAGTCGCGTGGGTCGGCTCTGTCG
CGGGGCCGGAGCGGCGCTTATCAGGGGCATGAGGGAGTATGGGCAAGGAA
GAGGGATGAAGGCCCTATGGGTGGATGGATGGGCGGGAAATGAGAGAAAA
TTGATCAGGTACTATGAACAGCAAGGGTTCCGAGCTGTCGGGGATTGGAG
TCATACCAGGGCGAACAATGTGCCGTGGTTGGGGACGTTGATGTGCATGG
ATATCTAGATGACCACCCATTCAAGCTCTCCCTTCCATCTCCGCCCCGCC
AAATCCACCCCCACCGACCACGCCTTCATCCTGTCTGCCTTCGACTCTTC
CCTCCCCCTCCTGGCCTCCATCGGCAGCCACGAACAATGGGGCTCAACTC
CCTTCTCCCAACGAGGAGACTTCCCCCAAGAAACCCTAAAAGAACTTGAC
CAATCCGAAGAATATCGCCTAACAGGCAAGAGCAACATGGACAGTCTACG
CATCTTCATTGTTGAAAGAGAATACCACCACGATGATGAGGAGCATACAG
AGTCTCTCTCATCCCACCTGCGAGTTACGTCCGACGGTCAATGCTTCCTT
CCAGTAGGGTTTGCCTATGTTCGCGAGAATTGGATTCCTAAGTATGTGAA
ATCACAACATCACCTTCCGATGCCAGTCATCCATAGTAGTTCTGAAATTG
GTGGGTTTCTCTATCTCGAGGTTATGGTTACGGATAGTCGCGTGGGTCGG
CTCTGTCGCGGGGCCGGAGCGGCGCTTATCAGGGGCATGAGGGAGTATGG
GCAAGGAAGAGGGATGAAGGCCCTATGGGTGGATGGATGGGCGGGAAATG
AGAGAAAATTGATCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004011-T1.utr5p1 | KJC3_004011-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016181 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3666331..3667212 - |
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