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KJC3_004013-T1, KJC3_004013-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004013-T1
Unique NameKJC3_004013-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3669065..3670392-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004013-T1 ID=KJC3_004013-T1|Name=KJC3_004013-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1328bp|location=Sequence derived from alignment at ch3:3669065..3670392- (Aspergillus niger KJC3)
AGCGATCAATTCCCTTCAGCCACAATGACATCGACTGACTCGGGTCCTGG
CAAGTCACGGCGGAGATCGAGATTCGGGTGCCGCAATTGCAAGCTCCGGA
AACTCAAGGTGGGTGCCCCTAGCACCTCGTAGATAAACCATCTCCACTGA
TCCATATCAAGTAGTGCGACGAAAGCAAACCACAATGCAAGCTATGTAGT
TCATTCGGGATAGTATGCAACTTCCTATCGACTACCACCCCGGACCTCCA
CCCCATTGCCGCTGACACGCGACGGTCATGGATGGTTCGAGGTGCTGCAG
CAGCAGCAGGACCGCAGCCCCCTCTCACCAATGCCGTCTGGACATCAGAC
GCGTCGACCTTCCATCAACTAAATACCAGATGTCAAGACTTTATCACCCG
GTACCTAGGACGCAGTCTCATCACCCCTGATGATCCAAACATGGGACATG
TGAATCGCAAGCTCCTAGAACTGGCCTTTACTGTAAGTTGACCATTCCCT
CATAAGCTCCAATCTTGGATACTGATCACCACATTGTAGCATCCCTACTT
AATGCACGCCTCCCTAGCAGTATCACTTACCTACGACCGCCATCTGAACA
GCCCACCAAAAAGCCACCGCACCCTAGAAGAATGCTACCACTGGTCACAA
AGCACCATCCTTTTCAACAAGAAGCTCCGCGAACAAATAGACCCCAAAGA
CAGAGACCCAATCTGGGGTACTGCAGCCGCGTTGGTAATCCTAACCTTCT
CATCCCCTAACGCACGCACTCCGGAAGAATCATGGCCTTTGAACCCCTCT
CCTTCCTCCCATCTGGACTGGGTGTATATGAATAAGGGCAAAATGTCCTT
GTGGAATATAGTCAACCCGCTGCGATCGGATAGTATCTTTCATGTCATGG
CGGGGACGTTCGCCTATGTGCATTCGCCGTTGCCTGAAGGAGGTACAGAG
GGTATACCGCCGGCTTTGGCGGCGCTGTGTAATATCAGGGATGAATCTAC
GGCAGAAACGAATTTGTATTTCCATGCTGCTCATGCAGTATCGCAGATCT
TGGAGGTTGAAGATAGTGAAGTTACGATGGGCCCGGTGCAGATGTTTATG
CGGTGTATTCATGGTGGGTTTGAGGGGTTGCTGAGAGAGAGGGATCCTGT
GGCGTTGGTGTTGCTGTATCTGTGGTATCGCAAAGCTGGGCGCTGTATTT
GGTGGATTGGACTTAGGGCTAGAGTGGAATGTCCTGCTATTCGGTTGTAT
TTGCAGCGATATCATGGGGCAAATGGGGCAGTGTTGGGGTTGCTTCCAGA
GTGTGGTCTTGGGGATAGGTGGGATTAG
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Coding sequence (CDS) from alignment at ch3:3669065..3670392-

>KJC3_004013-T1 ID=KJC3_004013-T1|Name=KJC3_004013-T1|organism=Aspergillus niger KJC3|type=CDS|length=3573bp|location=Sequence derived from alignment at ch3:3669065..3670392- (Aspergillus niger KJC3)
CATCCCTACTTAATGCACGCCTCCCTAGCAGTATCACTTACCTACGACCG
CCATCTGAACAGCCCACCAAAAAGCCACCGCACCCTAGAAGAATGCTACC
ACTGGTCACAAAGCACCATCCTTTTCAACAAGAAGCTCCGCGAACAAATA
GACCCCAAAGACAGAGACCCAATCTGGGGTACTGCAGCCGCGTTGGTAAT
CCTAACCTTCTCATCCCCTAACGCACGCACTCCGGAAGAATCATGGCCTT
TGAACCCCTCTCCTTCCTCCCATCTGGACTGGGTGTATATGAATAAGGGC
AAAATGTCCTTGTGGAATATAGTCAACCCGCTGCGATCGGATAGTATCTT
TCATGTCATGGCGGGGACGTTCGCCTATGTGCATTCGCCGTTGCCTGAAG
GAGGTACAGAGGGTATACCGCCGGCTTTGGCGGCGCTGTGTAATATCAGG
GATGAATCTACGGCAGAAACGAATTTGTATTTCCATGCTGCTCATGCAGT
ATCGCAGATCTTGGAGGTTGAAGATAGTGAAGTTACGATGGGCCCGGTGC
AGATGTTTATGCGGTGTATTCATGGTGGGTTTGAGGGGTTGCTGAGAGAG
AGGGATCCTGTGGCGTTGGTGTTGCTGTATCTGTGGTATCGCAAAGCTGG
GCGCTGTATTTGGTGGATTGGACTTAGGGCTAGAGTGGAATGTCCTGCTA
TTCGGTTGTATTTGCAGCGATATCATGGGGCAAATGGGGCAGTGTTGGGG
TTGCTTCCAGAGTGTGGTCTTGGGGATAGGTGGGATTAGTGCGACGAAAG
CAAACCACAATGCAAGCTATGTAGTTCATTCGGGATAGTATGCAACTTCC
TATCGACTACCACCCCGGACCTCCACCCCATTGCCGCTGACACGCGACGG
TCATGGATGGTTCGAGGTGCTGCAGCAGCAGCAGGACCGCAGCCCCCTCT
CACCAATGCCGTCTGGACATCAGACGCGTCGACCTTCCATCAACTAAATA
CCAGATGTCAAGACTTTATCACCCGGTACCTAGGACGCAGTCTCATCACC
CCTGATGATCCAAACATGGGACATGTGAATCGCAAGCTCCTAGAACTGGC
CTTTACTATGACATCGACTGACTCGGGTCCTGGCAAGTCACGGCGGAGAT
CGAGATTCGGGTGCCGCAATTGCAAGCTCCGGAAACTCAAGCATCCCTAC
TTAATGCACGCCTCCCTAGCAGTATCACTTACCTACGACCGCCATCTGAA
CAGCCCACCAAAAAGCCACCGCACCCTAGAAGAATGCTACCACTGGTCAC
AAAGCACCATCCTTTTCAACAAGAAGCTCCGCGAACAAATAGACCCCAAA
GACAGAGACCCAATCTGGGGTACTGCAGCCGCGTTGGTAATCCTAACCTT
CTCATCCCCTAACGCACGCACTCCGGAAGAATCATGGCCTTTGAACCCCT
CTCCTTCCTCCCATCTGGACTGGGTGTATATGAATAAGGGCAAAATGTCC
TTGTGGAATATAGTCAACCCGCTGCGATCGGATAGTATCTTTCATGTCAT
GGCGGGGACGTTCGCCTATGTGCATTCGCCGTTGCCTGAAGGAGGTACAG
AGGGTATACCGCCGGCTTTGGCGGCGCTGTGTAATATCAGGGATGAATCT
ACGGCAGAAACGAATTTGTATTTCCATGCTGCTCATGCAGTATCGCAGAT
CTTGGAGGTTGAAGATAGTGAAGTTACGATGGGCCCGGTGCAGATGTTTA
TGCGGTGTATTCATGGTGGGTTTGAGGGGTTGCTGAGAGAGAGGGATCCT
GTGGCGTTGGTGTTGCTGTATCTGTGGTATCGCAAAGCTGGGCGCTGTAT
TTGGTGGATTGGACTTAGGGCTAGAGTGGAATGTCCTGCTATTCGGTTGT
ATTTGCAGCGATATCATGGGGCAAATGGGGCAGTGTTGGGGTTGCTTCCA
GAGTGTGGTCTTGGGGATAGGTGGGATTAGTGCGACGAAAGCAAACCACA
ATGCAAGCTATGTAGTTCATTCGGGATAGTATGCAACTTCCTATCGACTA
CCACCCCGGACCTCCACCCCATTGCCGCTGACACGCGACGGTCATGGATG
GTTCGAGGTGCTGCAGCAGCAGCAGGACCGCAGCCCCCTCTCACCAATGC
CGTCTGGACATCAGACGCGTCGACCTTCCATCAACTAAATACCAGATGTC
AAGACTTTATCACCCGGTACCTAGGACGCAGTCTCATCACCCCTGATGAT
CCAAACATGGGACATGTGAATCGCAAGCTCCTAGAACTGGCCTTTACTAT
GACATCGACTGACTCGGGTCCTGGCAAGTCACGGCGGAGATCGAGATTCG
GGTGCCGCAATTGCAAGCTCCGGAAACTCAAGCATCCCTACTTAATGCAC
GCCTCCCTAGCAGTATCACTTACCTACGACCGCCATCTGAACAGCCCACC
AAAAAGCCACCGCACCCTAGAAGAATGCTACCACTGGTCACAAAGCACCA
TCCTTTTCAACAAGAAGCTCCGCGAACAAATAGACCCCAAAGACAGAGAC
CCAATCTGGGGTACTGCAGCCGCGTTGGTAATCCTAACCTTCTCATCCCC
TAACGCACGCACTCCGGAAGAATCATGGCCTTTGAACCCCTCTCCTTCCT
CCCATCTGGACTGGGTGTATATGAATAAGGGCAAAATGTCCTTGTGGAAT
ATAGTCAACCCGCTGCGATCGGATAGTATCTTTCATGTCATGGCGGGGAC
GTTCGCCTATGTGCATTCGCCGTTGCCTGAAGGAGGTACAGAGGGTATAC
CGCCGGCTTTGGCGGCGCTGTGTAATATCAGGGATGAATCTACGGCAGAA
ACGAATTTGTATTTCCATGCTGCTCATGCAGTATCGCAGATCTTGGAGGT
TGAAGATAGTGAAGTTACGATGGGCCCGGTGCAGATGTTTATGCGGTGTA
TTCATGGTGGGTTTGAGGGGTTGCTGAGAGAGAGGGATCCTGTGGCGTTG
GTGTTGCTGTATCTGTGGTATCGCAAAGCTGGGCGCTGTATTTGGTGGAT
TGGACTTAGGGCTAGAGTGGAATGTCCTGCTATTCGGTTGTATTTGCAGC
GATATCATGGGGCAAATGGGGCAGTGTTGGGGTTGCTTCCAGAGTGTGGT
CTTGGGGATAGGTGGGATTAGTGCGACGAAAGCAAACCACAATGCAAGCT
ATGTAGTTCATTCGGGATAGTATGCAACTTCCTATCGACTACCACCCCGG
ACCTCCACCCCATTGCCGCTGACACGCGACGGTCATGGATGGTTCGAGGT
GCTGCAGCAGCAGCAGGACCGCAGCCCCCTCTCACCAATGCCGTCTGGAC
ATCAGACGCGTCGACCTTCCATCAACTAAATACCAGATGTCAAGACTTTA
TCACCCGGTACCTAGGACGCAGTCTCATCACCCCTGATGATCCAAACATG
GGACATGTGAATCGCAAGCTCCTAGAACTGGCCTTTACTATGACATCGAC
TGACTCGGGTCCTGGCAAGTCACGGCGGAGATCGAGATTCGGGTGCCGCA
ATTGCAAGCTCCGGAAACTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004013KJC3_004013Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004013-T1KJC3_004013-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004013-T1.cdsKJC3_004013-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004013-T1.exon3KJC3_004013-T1.exon3Aspergillus niger KJC3exon
KJC3_004013-T1.exon2KJC3_004013-T1.exon2Aspergillus niger KJC3exon
KJC3_004013-T1.exon1KJC3_004013-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004013-T1.utr5p1KJC3_004013-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3669065..3670392 -
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