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KJC3_004128-T2, KJC3_004128-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004128-T2
Unique NameKJC3_004128-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4019027..4020075+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004128-T2 ID=KJC3_004128-T2|Name=KJC3_004128-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1049bp|location=Sequence derived from alignment at ch3:4019027..4020075+ (Aspergillus niger KJC3)
CTTTAATCATATCCCATCCAATATGCCCACCTCTAAAACCAAAACCATCC
TCATTACCGGCTGTTCCGCCCACGGCATCGGCGCAGCCTTAGCCCTCACC
CTCGCCCGCCAGGGCCATTTCATCTTCGCCACAGCCCGCAATACCACCAA
AATCTCTGAGTCCCTGAGTGCCCTGGAGAACGTGCAGGTCCTCCCCCTGG
ATGTGACAGACTCCGCCACCATCGCTGACGCTGTGCGCGCAGTGAGAGAA
CATGGTCGGGGGCTGGATATCCTGGTCAACAATGCCGGGACGGGGTATAC
GATGCCTCTACTAGAGGCGGACTTGGACCGCGCCAAAGCAGTGTATGAAG
CTAATGTGTGGGGCTTGCTTCGGCTAGTTCAGGCATGCAGTGACCTGCTG
GTTGCAGCCGAGGGGAGGATTGTTAATATGAGTAGTGTGGGGGCAGTGGT
CAATACACCTCGGATTGGTTCGTTCTTTTTCCCCTTTCGAAGAGATCAGC
ATAAGCGAATCAACTATACGTACAAACAGGGATCTATTCCTCCTCCAAAG
CCGCAATCACCCAGCTGTCCGAGACGCTTCGTCTCGAACTCTCGCCCCTG
GGCGTTAGCGTGCTCTGTATCATGGCGGGTACTATTACCACCGACTTCCA
TGCAAATGAGCCGGAAGTCGTCTTGCTGCCGACTTCCCGGTATGCAGCTA
TTGGACAAACCATTTCGGATTGGGCGACTGGACAGGCTGGTCCCCAAGGC
TGTTCGGCGGATGAGTTCGCTAACTTGATTGCCGGCGATGTTCTGGGAAG
CAGTAGTGCTAATGGGGGGTTGGTGTGGAAAGGCCCGCATAGTGCCGCTG
TTAAGTTTATGGCGAGGTGGTGTCCGGGGGGGTTGTTGGTGAGTTCCTGT
TTAATTGATTCTTTGTCTCCTCTTCCGGGTCGTCCCGGGTCCCCAACCGT
GTTGGTCGTTTGATTGGTTGCTAACTAGGGCCCTAACTAGGATCGCTTGA
TGAGTAATGGGCAGGGGTTGGATGAGTTGGTGAAGACCACAAACAAGAA
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Coding sequence (CDS) from alignment at ch3:4019027..4020075+

>KJC3_004128-T2 ID=KJC3_004128-T2|Name=KJC3_004128-T2|organism=Aspergillus niger KJC3|type=CDS|length=1512bp|location=Sequence derived from alignment at ch3:4019027..4020075+ (Aspergillus niger KJC3)
ATGCCCACCTCTAAAACCAAAACCATCCTCATTACCGGCTGTTCCGCCCA
CGGCATCGGCGCAGCCTTAGCCCTCACCCTCGCCCGCCAGGGCCATTTCA
TCTTCGCCACAGCCCGCAATACCACCAAAATCTCTGAGTCCCTGAGTGCC
CTGGAGAACGTGCAGGTCCTCCCCCTGGATGTGACAGACTCCGCCACCAT
CGCTGACGCTGTGCGCGCAGTGAGAGAACATGGTCGGGGGCTGGATATCC
TGGTCAACAATGCCGGGACGGGGTATACGATGCCTCTACTAGAGGCGGAC
TTGGACCGCGCCAAAGCAGTGTATGAAGCTAATGTGTGGGGCTTGCTTCG
GCTAGTTCAGGCATGCAGTGACCTGCTGGTTGCAGCCGAGGGGAGGATTG
TTAATATGAGTAGTGTGGGGGCAGTGGTCAATACACCTCGGATTGGTTCG
TTCTTTTTCCCCTTTCGAAGAGATCAGCATAAGCGAATCAACTATACGTA
CAAACAGGGATCTATTCCTCCTCCAAAGCCGCAATCACCCAGCTGTCCGA
GACGCTTCGTCTCGAACTCTCGCCCCTGGGCGTTAGCGTGCTCTGTATCA
TGGCGGGTACTATTACCACCGACTTCCATGCAAATGAGCCGGAAGTCGTC
TTGCTGCCGACTTCCCGTAGTGCTAATGGGGGGTTGGTGTGGAAAGGCCC
GCATAGTGCCGCTGTTAAGTTTATGGCGAGGTGGTGTCCGGGGGGGTTGT
TGGTGAATGCCCACCTCTAAAACCAAAACCATCCTCATTACCGGCTGTTC
CGCCCACGGCATCGGCGCAGCCTTAGCCCTCACCCTCGCCCGCCAGGGCC
ATTTCATCTTCGCCACAGCCCGCAATACCACCAAAATCTCTGAGTCCCTG
AGTGCCCTGGAGAACGTGCAGGTCCTCCCCCTGGATGTGACAGACTCCGC
CACCATCGCTGACGCTGTGCGCGCAGTGAGAGAACATGGTCGGGGGCTGG
ATATCCTGGTCAACAATGCCGGGACGGGGTATACGATGCCTCTACTAGAG
GCGGACTTGGACCGCGCCAAAGCAGTGTATGAAGCTAATGTGTGGGGCTT
GCTTCGGCTAGTTCAGGCATGCAGTGACCTGCTGGTTGCAGCCGAGGGGA
GGATTGTTAATATGAGTAGTGTGGGGGCAGTGGTCAATACACCTCGGATT
GGTTCGTTCTTTTTCCCCTTTCGAAGAGATCAGCATAAGCGAATCAACTA
TACGTACAAACAGGGATCTATTCCTCCTCCAAAGCCGCAATCACCCAGCT
GTCCGAGACGCTTCGTCTCGAACTCTCGCCCCTGGGCGTTAGCGTGCTCT
GTATCATGGCGGGTACTATTACCACCGACTTCCATGCAAATGAGCCGGAA
GTCGTCTTGCTGCCGACTTCCCGTAGTGCTAATGGGGGGTTGGTGTGGAA
AGGCCCGCATAGTGCCGCTGTTAAGTTTATGGCGAGGTGGTGTCCGGGGG
GGTTGTTGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004128KJC3_004128Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004128-T2.utr5p1KJC3_004128-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004128-T2.exon1KJC3_004128-T2.exon1Aspergillus niger KJC3exon
KJC3_004128-T2.exon2KJC3_004128-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004128-T2.cdsKJC3_004128-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004128-T2.utr3p1KJC3_004128-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004128-T2KJC3_004128-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4019027..4020075 +
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