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KJC3_004132-T1, KJC3_004132-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004132-T1
Unique NameKJC3_004132-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4025475..4027613-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004132-T1 ID=KJC3_004132-T1|Name=KJC3_004132-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2139bp|location=Sequence derived from alignment at ch3:4025475..4027613- (Aspergillus niger KJC3)
ATGCTACATACCTTTCCAACTACAGGTTCAGTACCTAGGCGCCGCAAAGT
GCGCCGGGCATGCCGTTTCTGTCGAGAGCACCGAGTGCGTTGTGACGCAG
TCGCTCCCTGCCATCAATGCGTGGTCAACAAAATACCCTGTAGTCGTCTC
AGGCGCTCCGCCAGTCCATCTGATCGGTCTGGTGCTGCTATGAATGCGTC
CCCATCCTCACTTCCTGTGACCCCGAAAACCAGTGCCGTCAAGGGAAGGG
AGAAATCCAGCGCAGGCATAATATCATGCCCCGACGACACAGACACAGCG
CCGATCAACTATCGCTTGGATTCAACACTTGGCTTTATTGATCGCATAAA
CACCTTCTGCGCTGGTGTATCGCAACTGACGACTCAGCGGTCCTCGGCGG
GGAACCCTCCTTACTCATCTCCTTTTACCCCCCATGACACAGATGGCACA
GCTGTGGTTGAGTGTGATTTATCCTCTGATCAGGTCGATCGTGTTTTAGA
GATTTTTTGGGCACGGCTACTCCCACAAGTTCCAATTGTTCGCCGAGAGG
ATCTAGAGCACCCTCTTTCCGACCAAGATACGCTGACCGGCTCCCAACCT
CTGCGGGATGCTGTAACAGCCTACACTATGCAGTACATATTCTACTCAGG
CCTCCATTCTCGATTACTTGGATTGCAATGGAAGCAGTTCAAAAGAAGCA
ATCGGTGCTCAAAGAAGATTGGCATGCCTTATTTCCAACGTTGTCTAACT
GGCGCGATGCAATATTCAACGTTTGCGAAGCCCTCACTTCCAATCCTTCA
GTGCTACTGTATCATGACCTTGTACTTACTAGATGCTGGACAACATCAGG
CGGCTTATAACATGATCGGGCTCGCTGTTCGTATTGCTCGATCATTGGAC
CTTGACTGTAATCCGCCCCCTCAAGTCTCTCGAGAGCAGGCGGAGCTCTA
CTCTCGTATATGGTGGACCTTAGTCCATCTCGACTTTCGCTGCTCAAGGC
ACCTTGGGAAGCCTGTCAGTGTGCAGCTTCCTATATATAGATCTTCGCCA
CCATGTTGGATGTCGAATGATCCACCCCGTCTGGTACATTTCCCATATCA
TAATGAATCAATTCGTCTCACGTGTGCAACACTGGCTGTTATTGAGTCAA
TGGCACATCACGAAAACACACATCACGAAAAGGCAGGAGAAAGCCATGAC
ATTGAATTTCAGGCAAACGTTCTGACAAAGAATTTGCGTCATTTACGTGT
GTGGAAAGATGAATTACGGCAAAACGCATGGTTCAAGCATCTTCAACTGG
ACGTTCAAGATGAACCAGTGTCACGAAAGTATTTCTGTGGTCTAGGAGAT
GATGGTGGCGATGAGTACAATGACTATATGAAAAAAGTGCCACTCCAGAT
CCAAACGGAGGCTTTGCTCGAGCTCCAATACCACGACGCAATGATCAGTC
TGCATAGAGTTTTTATCCAGTTTCCTCGTCAGCCGGCGATGAACCGAGAA
AATCCCCTTGCCGGTGCACATGCTGCAACTGCTCTGAAACACGCCTTGGC
AACGATCCACACAGTCTACTCTTGTATGACCATGCACGACATATTCTATG
GATCTTGCGAACTTTATCAATATCAGTGGAATGCCGTTCTGACGCTCATG
GGCTTTATATTGGCATTCCCATTCTGTCCACGCTGTCCAGAGGCACGCGG
CTACGTCGACCTAGCCTTGGAGACGTTCGAGTTTGCGGGTTCCCAAAATG
ACGCCGCTGTTCGTGCAGCATGTCTCACACGCCACCTATGTGAGAAGGTC
GATAAGTTGACTATGATGCTGGATATTGATCTCCGGCGTGGTGTGTCCGA
AAGCACAAAAGGTGTACCTCCGTCGACGAATGATGGTCTGACGCAACGGG
TGGATCAACCATCTCATGCGATAAGCATGGACATGGATGTTCGAAATACG
AACATCGATCAGTCCATCTTGTCACTTCCAGAGAACCAAACAAGTAATGA
TTTATTTTGGCCCTGGGCGGATCTCGTTGATCCCGATATCTGGCCCAGCT
ATTGCGATGGAGTCAACGAAGCCTTCATGGACTTTTCTCATGTACCTATG
TTCGGAGATTCTGCAGACCCTACATCCGAGCACTTATAG
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Coding sequence (CDS) from alignment at ch3:4025475..4027613-

>KJC3_004132-T1 ID=KJC3_004132-T1|Name=KJC3_004132-T1|organism=Aspergillus niger KJC3|type=CDS|length=2139bp|location=Sequence derived from alignment at ch3:4025475..4027613- (Aspergillus niger KJC3)
ATGCTACATACCTTTCCAACTACAGGTTCAGTACCTAGGCGCCGCAAAGT
GCGCCGGGCATGCCGTTTCTGTCGAGAGCACCGAGTGCGTTGTGACGCAG
TCGCTCCCTGCCATCAATGCGTGGTCAACAAAATACCCTGTAGTCGTCTC
AGGCGCTCCGCCAGTCCATCTGATCGGTCTGGTGCTGCTATGAATGCGTC
CCCATCCTCACTTCCTGTGACCCCGAAAACCAGTGCCGTCAAGGGAAGGG
AGAAATCCAGCGCAGGCATAATATCATGCCCCGACGACACAGACACAGCG
CCGATCAACTATCGCTTGGATTCAACACTTGGCTTTATTGATCGCATAAA
CACCTTCTGCGCTGGTGTATCGCAACTGACGACTCAGCGGTCCTCGGCGG
GGAACCCTCCTTACTCATCTCCTTTTACCCCCCATGACACAGATGGCACA
GCTGTGGTTGAGTGTGATTTATCCTCTGATCAGGTCGATCGTGTTTTAGA
GATTTTTTGGGCACGGCTACTCCCACAAGTTCCAATTGTTCGCCGAGAGG
ATCTAGAGCACCCTCTTTCCGACCAAGATACGCTGACCGGCTCCCAACCT
CTGCGGGATGCTGTAACAGCCTACACTATGCAGTACATATTCTACTCAGG
CCTCCATTCTCGATTACTTGGATTGCAATGGAAGCAGTTCAAAAGAAGCA
ATCGGTGCTCAAAGAAGATTGGCATGCCTTATTTCCAACGTTGTCTAACT
GGCGCGATGCAATATTCAACGTTTGCGAAGCCCTCACTTCCAATCCTTCA
GTGCTACTGTATCATGACCTTGTACTTACTAGATGCTGGACAACATCAGG
CGGCTTATAACATGATCGGGCTCGCTGTTCGTATTGCTCGATCATTGGAC
CTTGACTGTAATCCGCCCCCTCAAGTCTCTCGAGAGCAGGCGGAGCTCTA
CTCTCGTATATGGTGGACCTTAGTCCATCTCGACTTTCGCTGCTCAAGGC
ACCTTGGGAAGCCTGTCAGTGTGCAGCTTCCTATATATAGATCTTCGCCA
CCATGTTGGATGTCGAATGATCCACCCCGTCTGGTACATTTCCCATATCA
TAATGAATCAATTCGTCTCACGTGTGCAACACTGGCTGTTATTGAGTCAA
TGGCACATCACGAAAACACACATCACGAAAAGGCAGGAGAAAGCCATGAC
ATTGAATTTCAGGCAAACGTTCTGACAAAGAATTTGCGTCATTTACGTGT
GTGGAAAGATGAATTACGGCAAAACGCATGGTTCAAGCATCTTCAACTGG
ACGTTCAAGATGAACCAGTGTCACGAAAGTATTTCTGTGGTCTAGGAGAT
GATGGTGGCGATGAGTACAATGACTATATGAAAAAAGTGCCACTCCAGAT
CCAAACGGAGGCTTTGCTCGAGCTCCAATACCACGACGCAATGATCAGTC
TGCATAGAGTTTTTATCCAGTTTCCTCGTCAGCCGGCGATGAACCGAGAA
AATCCCCTTGCCGGTGCACATGCTGCAACTGCTCTGAAACACGCCTTGGC
AACGATCCACACAGTCTACTCTTGTATGACCATGCACGACATATTCTATG
GATCTTGCGAACTTTATCAATATCAGTGGAATGCCGTTCTGACGCTCATG
GGCTTTATATTGGCATTCCCATTCTGTCCACGCTGTCCAGAGGCACGCGG
CTACGTCGACCTAGCCTTGGAGACGTTCGAGTTTGCGGGTTCCCAAAATG
ACGCCGCTGTTCGTGCAGCATGTCTCACACGCCACCTATGTGAGAAGGTC
GATAAGTTGACTATGATGCTGGATATTGATCTCCGGCGTGGTGTGTCCGA
AAGCACAAAAGGTGTACCTCCGTCGACGAATGATGGTCTGACGCAACGGG
TGGATCAACCATCTCATGCGATAAGCATGGACATGGATGTTCGAAATACG
AACATCGATCAGTCCATCTTGTCACTTCCAGAGAACCAAACAAGTAATGA
TTTATTTTGGCCCTGGGCGGATCTCGTTGATCCCGATATCTGGCCCAGCT
ATTGCGATGGAGTCAACGAAGCCTTCATGGACTTTTCTCATGTACCTATG
TTCGGAGATTCTGCAGACCCTACATCCGAGCACTTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004132KJC3_004132Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004132-T1.cdsKJC3_004132-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004132-T1.exon1KJC3_004132-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004132-T1KJC3_004132-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4025475..4027613 -
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