You are here

Home

KJC3_004218-T1, KJC3_004218-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004218-T1
Unique NameKJC3_004218-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4245975..4246844+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004218-T1 ID=KJC3_004218-T1|Name=KJC3_004218-T1|organism=Aspergillus niger KJC3|type=mRNA|length=870bp|location=Sequence derived from alignment at ch3:4245975..4246844+ (Aspergillus niger KJC3)
ATGGCAACCCCAAGCCTCATCTCCATCAACAAGCTCGCCAACACCCGTGT
CCTCATAATCGGCGGCACGTCCGGCATCGGCTTCTCAGTCGCCCGTGCAG
CCCTGGAACACGGCGCCTATATCATCATCTCCAGCTCAAATTCCCAGAGA
GTCTCATCCACCATCTCTCGTCTCCAAACTCTCTATCCAGACAATGTCTA
CACCGACCACATCACCGGCAGACCCTGTGACCTAGGCGACCAAGCCACAC
ACAAACAGAACCTTCTTTCCCTCCTCGACTACGCTACGTCACCTTTGCTC
TTCCCCAATACCACTTCTCCTGCTAGAAGTAATGATGATACTATTGAGCG
AGTATTACTAAACCATATAATCTACACCGCTGGTACTCCACCCCCACGGA
TTCCTATTGCTTCTTCCGAAACCACCGCCTCTAGTTTCTTAGCCTTGAGC
ACTCTCCGGCTACTTGCCCCAATGTTGATTGGTAAACATGCGAAGAAATA
CTTGGTTAATCATCATACCTCATCCATAACCTTCACCTCAGGGTTAATGG
CGGCCAGACCCGCGGCGGGGTTGGCGGTGGGTGGTGCGGCAGTGGGTTCA
GCGCTCGAAGGCTTGACAAGGGGATTGGCGGTGGAGTTGGCCCCTATCCG
TGTGAACGTGGTTGCACCGGGTGCTGTCGAGACGGAGATATTTGAAAGGT
TAGGACCTGCGAGAGAAGCATATATGGAGGCTTTTAGGAGGGGGACGTTG
ACTGGGAAGGTGGGGAGACCAGAGGATGTTGCAGAGGCGTATATTTGGTG
TATGAAGGATGGGTTCGTCACGGGACAAAGACTTGGGAGTGATGGGGGCG
CATTGTTAAAGGGGGCATAG
back to top

Coding sequence (CDS) from alignment at ch3:4245975..4246844+

>KJC3_004218-T1 ID=KJC3_004218-T1|Name=KJC3_004218-T1|organism=Aspergillus niger KJC3|type=CDS|length=870bp|location=Sequence derived from alignment at ch3:4245975..4246844+ (Aspergillus niger KJC3)
ATGGCAACCCCAAGCCTCATCTCCATCAACAAGCTCGCCAACACCCGTGT
CCTCATAATCGGCGGCACGTCCGGCATCGGCTTCTCAGTCGCCCGTGCAG
CCCTGGAACACGGCGCCTATATCATCATCTCCAGCTCAAATTCCCAGAGA
GTCTCATCCACCATCTCTCGTCTCCAAACTCTCTATCCAGACAATGTCTA
CACCGACCACATCACCGGCAGACCCTGTGACCTAGGCGACCAAGCCACAC
ACAAACAGAACCTTCTTTCCCTCCTCGACTACGCTACGTCACCTTTGCTC
TTCCCCAATACCACTTCTCCTGCTAGAAGTAATGATGATACTATTGAGCG
AGTATTACTAAACCATATAATCTACACCGCTGGTACTCCACCCCCACGGA
TTCCTATTGCTTCTTCCGAAACCACCGCCTCTAGTTTCTTAGCCTTGAGC
ACTCTCCGGCTACTTGCCCCAATGTTGATTGGTAAACATGCGAAGAAATA
CTTGGTTAATCATCATACCTCATCCATAACCTTCACCTCAGGGTTAATGG
CGGCCAGACCCGCGGCGGGGTTGGCGGTGGGTGGTGCGGCAGTGGGTTCA
GCGCTCGAAGGCTTGACAAGGGGATTGGCGGTGGAGTTGGCCCCTATCCG
TGTGAACGTGGTTGCACCGGGTGCTGTCGAGACGGAGATATTTGAAAGGT
TAGGACCTGCGAGAGAAGCATATATGGAGGCTTTTAGGAGGGGGACGTTG
ACTGGGAAGGTGGGGAGACCAGAGGATGTTGCAGAGGCGTATATTTGGTG
TATGAAGGATGGGTTCGTCACGGGACAAAGACTTGGGAGTGATGGGGGCG
CATTGTTAAAGGGGGCATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004218KJC3_004218Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004218-T1.exon1KJC3_004218-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004218-T1.cdsKJC3_004218-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004218-T1KJC3_004218-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4245975..4246844 +
Powered by Drupal