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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4604152..4605593- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004342-T1 ID=KJC3_004342-T1|Name=KJC3_004342-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1442bp|location=Sequence derived from alignment at ch3:4604152..4605593- (Aspergillus niger KJC3)
ATGCAGGGCAAGCGTAATGAGCCCTAACGCACCGAGAGCAGTTAGACTCG
CTAAGCGAGCCACTAGCTCGACTCTCTCGGGCGGCCAAACCTGAGCGCGA
ATTTTCGAGATCGATTTCGACCCGTACGACAACTCCCAGCGCCAGCCCGC
GAGACGACGACAAGGTATGTGATATTGCTGTCAGCTGCTTGCCTGTTGCA
TGCTAATTGAGAACAGATGGTCCTCGCAAAGAAGCACGTCCCCATCGTCA
AGAAGCGTATGTCCTTTCTTTTCTCCCTGCTAGTCCCAGCCCAGTCCAGT
TCCCAGCCAGAGTACGATCCGTCGGTTGTCAGTCGTCCAGCAAGCATGAG
GAATATACACGGTGCGATGGAATGAGAAATCAGACGATCGGAGCGAACGA
ATCAATTGGTGCGAAAAAAAAAAATAACGACAACGAACGACGAATATGAT
CGGCGAAGAAATTATCATAAGCGACCGAAATTTCGATTCGATCTGGACGA
AGATATTTTACCACCAACATGAATTGACAAGTGCTTGCTGGACCACGGAC
ATACAGCCGGATTGAACTAAACCACATACACACATCATCAAGACGAACGA
CCCGACTAACATCAAACTCCTTCCAGGCACCAAGCGTTTCTGGCGCCACC
AGTCCGACCGCTTCAAGTGCGTGCCGGAGTCATGGCGCAAGCCCAAGGGT
ATCGACAACCGCGTCCGTAGACGCTTCCGTGGCAACATCCCCATGCCCTC
CATCGGCTACGGATCCAACAAGAAGACCAAGCACATGATGCCCTCCGGCC
ACAAGGCTTTCCTCGTCCACAACCCCAAGGACGTTGAGCTCCTGTTGATG
CACAACCGCACCTACGCCGCTGAGTACGTTTCACCTGTCTTTCTGACATG
ACCTCTATAACCACGGAATATACGATGCTAATAAAGAAAACAGGATCGCC
AGCGCCGTCTCCTCCCGCAAGCGCGTCGACATCATCGCCAAGGCCAAGGC
TCTCGGCGTCAAGGTCACCAACCCCAAGGGCCGCGTCACCACCGAGGCTT
AAATGGACATGGAATGAATGTAAAGAAAGCCCAAGAAATTTCATCATTTT
CATTTTCATTTTTCATTAAACTCTTTCCACTTATACCAACCAAATGGGAA
CCAACCACTTTCGGGGGACATAAAAAAGCAGCAACAGCAACTACTTCACT
GTGGTAGTGGAGTGGCTTGTTTGTTGTGATTGGGGACTTGCGGAGCCTTG
AATCATCGCATCTTCTAATGTGGGCTTTGGCTTTGACGTTGACGACGTAT
GTGCTGGATTGCAGCGTTTATGATGATTGATTTACATGCATGTGGGTCTT
TTGTCATGGCGCTTGTGGTCGTGGCTGGTGCTGCCAGTCTGGGAATAAAA
ATTCAAATCTTATGAAGACTCTTTGATGACCTCGAAGTGTGG back to topCoding sequence (CDS) from alignment at ch3:4604152..4605593- >KJC3_004342-T1 ID=KJC3_004342-T1|Name=KJC3_004342-T1|organism=Aspergillus niger KJC3|type=CDS|length=2535bp|location=Sequence derived from alignment at ch3:4604152..4605593- (Aspergillus niger KJC3)
GATCGCCAGCGCCGTCTCCTCCCGCAAGCGCGTCGACATCATCGCCAAGG
CCAAGGCTCTCGGCGTCAAGGTCACCAACCCCAAGGGCCGCGTCACCACC
GAGGCTTAAGCACCAAGCGTTTCTGGCGCCACCAGTCCGACCGCTTCAAG
TGCGTGCCGGAGTCATGGCGCAAGCCCAAGGGTATCGACAACCGCGTCCG
TAGACGCTTCCGTGGCAACATCCCCATGCCCTCCATCGGCTACGGATCCA
ACAAGAAGACCAAGCACATGATGCCCTCCGGCCACAAGGCTTTCCTCGTC
CACAACCCCAAGGACGTTGAGCTCCTGTTGATGCACAACCGCACCTACGC
CGCTGAATGGTCCTCGCAAAGAAGCACGTCCCCATCGTCAAGAAGCCTCG
ACTCTCTCGGGCGGCCAAACCTGAGCGCGAATTTTCGAGATCGATTTCGA
CCCGTACGACAACTCCCAGCGCCAGCCCGCGAGACGACGACAAGATGCAG
GGCAAGCGATCGCCAGCGCCGTCTCCTCCCGCAAGCGCGTCGACATCATC
GCCAAGGCCAAGGCTCTCGGCGTCAAGGTCACCAACCCCAAGGGCCGCGT
CACCACCGAGGCTTAAGCACCAAGCGTTTCTGGCGCCACCAGTCCGACCG
CTTCAAGTGCGTGCCGGAGTCATGGCGCAAGCCCAAGGGTATCGACAACC
GCGTCCGTAGACGCTTCCGTGGCAACATCCCCATGCCCTCCATCGGCTAC
GGATCCAACAAGAAGACCAAGCACATGATGCCCTCCGGCCACAAGGCTTT
CCTCGTCCACAACCCCAAGGACGTTGAGCTCCTGTTGATGCACAACCGCA
CCTACGCCGCTGAATGGTCCTCGCAAAGAAGCACGTCCCCATCGTCAAGA
AGCCTCGACTCTCTCGGGCGGCCAAACCTGAGCGCGAATTTTCGAGATCG
ATTTCGACCCGTACGACAACTCCCAGCGCCAGCCCGCGAGACGACGACAA
GATGCAGGGCAAGCGATCGCCAGCGCCGTCTCCTCCCGCAAGCGCGTCGA
CATCATCGCCAAGGCCAAGGCTCTCGGCGTCAAGGTCACCAACCCCAAGG
GCCGCGTCACCACCGAGGCTTAAGCACCAAGCGTTTCTGGCGCCACCAGT
CCGACCGCTTCAAGTGCGTGCCGGAGTCATGGCGCAAGCCCAAGGGTATC
GACAACCGCGTCCGTAGACGCTTCCGTGGCAACATCCCCATGCCCTCCAT
CGGCTACGGATCCAACAAGAAGACCAAGCACATGATGCCCTCCGGCCACA
AGGCTTTCCTCGTCCACAACCCCAAGGACGTTGAGCTCCTGTTGATGCAC
AACCGCACCTACGCCGCTGAATGGTCCTCGCAAAGAAGCACGTCCCCATC
GTCAAGAAGCCTCGACTCTCTCGGGCGGCCAAACCTGAGCGCGAATTTTC
GAGATCGATTTCGACCCGTACGACAACTCCCAGCGCCAGCCCGCGAGACG
ACGACAAGATGCAGGGCAAGCGATCGCCAGCGCCGTCTCCTCCCGCAAGC
GCGTCGACATCATCGCCAAGGCCAAGGCTCTCGGCGTCAAGGTCACCAAC
CCCAAGGGCCGCGTCACCACCGAGGCTTAAGCACCAAGCGTTTCTGGCGC
CACCAGTCCGACCGCTTCAAGTGCGTGCCGGAGTCATGGCGCAAGCCCAA
GGGTATCGACAACCGCGTCCGTAGACGCTTCCGTGGCAACATCCCCATGC
CCTCCATCGGCTACGGATCCAACAAGAAGACCAAGCACATGATGCCCTCC
GGCCACAAGGCTTTCCTCGTCCACAACCCCAAGGACGTTGAGCTCCTGTT
GATGCACAACCGCACCTACGCCGCTGAATGGTCCTCGCAAAGAAGCACGT
CCCCATCGTCAAGAAGCCTCGACTCTCTCGGGCGGCCAAACCTGAGCGCG
AATTTTCGAGATCGATTTCGACCCGTACGACAACTCCCAGCGCCAGCCCG
CGAGACGACGACAAGATGCAGGGCAAGCGATCGCCAGCGCCGTCTCCTCC
CGCAAGCGCGTCGACATCATCGCCAAGGCCAAGGCTCTCGGCGTCAAGGT
CACCAACCCCAAGGGCCGCGTCACCACCGAGGCTTAAGCACCAAGCGTTT
CTGGCGCCACCAGTCCGACCGCTTCAAGTGCGTGCCGGAGTCATGGCGCA
AGCCCAAGGGTATCGACAACCGCGTCCGTAGACGCTTCCGTGGCAACATC
CCCATGCCCTCCATCGGCTACGGATCCAACAAGAAGACCAAGCACATGAT
GCCCTCCGGCCACAAGGCTTTCCTCGTCCACAACCCCAAGGACGTTGAGC
TCCTGTTGATGCACAACCGCACCTACGCCGCTGAATGGTCCTCGCAAAGA
AGCACGTCCCCATCGTCAAGAAGCCTCGACTCTCTCGGGCGGCCAAACCT
GAGCGCGAATTTTCGAGATCGATTTCGACCCGTACGACAACTCCCAGCGC
CAGCCCGCGAGACGACGACAAGATGCAGGGCAAGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004342-T1.utr3p1 | KJC3_004342-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036351 |
| DBxref | InterPro:IPR001515 |
| DBxref | PFAM:PF01655 |
| Product | 60S ribosomal protein L32 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4604152..4605593 - |
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