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KJC3_013049-T1, KJC3_013049-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013049-T1
Unique NameKJC3_013049-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4897695..4899437+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013049-T1 ID=KJC3_013049-T1|Name=KJC3_013049-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1743bp|location=Sequence derived from alignment at ch3:4897695..4899437+ (Aspergillus niger KJC3)
TGAGCAGCCACCTCTACGCGGTGCTGGGGACTAGTACTTGCCAGAGTATA
TCCACTCGTCATGACGCAAGGAAGCTAAGATCTGCTCGCGCCATGCCGCG
ATTTCTACCAGCATTGGTGCAATATCGTGCATCGCAAGGGCGGAATGGAC
ATCAAGATCCGTCCATGCCCGCTGCCGGTCATGTATAATAGTTAACTTCT
TTTTTGTGGTACCGACACATTCGAAATCGGCTTCCGCCCCAAACACTCTT
TAATTGCTTAGAAGCCCCACTTGTAGATATTTAGCGCCTTGGCAGTTATG
ATGGTGGTTTTGTATGTTACCAGCACTGTATAATTCTGGAACTTTCGATT
TCTTACAGTGACATAGCAGTACAATACAGGCAACTAGTTTATCAACGTTA
ACGTTAACTGATTCGCATGACTCATCTCCTGCACACCTCCCATTTCTCAC
ATCGTTCCGCACTCTTGCAAGTAAGCAGGCTGTTCAGATGTTCCAAATGG
CCCCCAATCTAGCACCGTCGCAGCATGAGCTCATTCGCGACGTGATTCTA
AGCAGATCATTAAGTACTGCTAAATGGCTGGCTTGGCTGGTTGCAGTGAG
CGCAGCATTAGATATATTCGTTCGAACCTGCGACTTTTCGGCAGTGTCAA
AGCACCTTCAAACAAAGCCGGCCGACCGCGAACGGTACTGTAACCCCGCC
TATGCTGGACGCCCTTTGCGAGTATCTCCTCACGAAACCGGATCTGTATC
TAGACGAAATGGCAATTTTCTTATGGGATGAATTCGATACTGTAGTGACA
ACCGCCAGCATCAGGAGGGCGCTCAAATCCGTTGGATGGTCTAAAAAGGC
AGCTCGTCGGATTGCTGGAGAGCGTAATGCGGACTTGCGGGACTGCTATT
TTCATAGCATGTCTGAATTCCGTTCGTACCACCTTATTTATGTCGATGAG
TCGGGATGTGATAAGCGAGTTGGCTTCAGGAGAACGGCCTGGTCCCCTGT
TGGAGTAACACCGGTACAAATCTCTCGGTTTCATCGCGGACAGCGATATC
AAATACTGCCAGCGTATGCCCAGGATGGTGTTATGCTTGCCCGTGTGTTC
CAGGGATCTACTGATGCATCCATATTCGAAGATTTTGTGGAGCAGCTGCT
TCATCATTGCGGGAGGTGGCCGGAGCCCAAATCTGTGCTGATAATGGACA
ATGCATCGTTTCATCATAGCGAGCGCGTGGAACAGCTGTGCAACGATGCT
GGGGTAAAGTTGCTGTACCTGCCTCCATACTCACCGGACCTCAATCCCAT
TGAGGAGATGTTTGCAGAGTTGAAGGCGTTCATAAAGCGCAATTGGAATA
TATATGAAGAGGATCCAGAGCTCAATTTCGATGCCTATCTAGAGTGGTGC
ATCGACGTTGTTGGTGCCAGAAAGCTGAGTGCAGAGGGCATTTTCGTCAT
GCTGGGATTACTCTGGAACCACTGCCTCTGAGCTTCGACTGGATCCACCA
GTGATTCAACACCCCGCTCTTGTGTCGATTAGAACCTCGATGACTAATGA
GGACAACCCTGCGTGTCAAGAAGTCGGAGGCATTATTTCAGATAATGAAT
AATAGCTATGCCCTGATAAAACCTCTCAGAACTCAGTTGTGGCTTAGACT
TTGATCTTATCTGGGTAACTAGTAAATGATCTTCCTAGGTTCGTCTATAG
CACTTTACGAATATCATGTTCAGAAACTGGCCTTGTTGCTTAA
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Coding sequence (CDS) from alignment at ch3:4897695..4899437+

>KJC3_013049-T1 ID=KJC3_013049-T1|Name=KJC3_013049-T1|organism=Aspergillus niger KJC3|type=CDS|length=780bp|location=Sequence derived from alignment at ch3:4897695..4899437+ (Aspergillus niger KJC3)
ATGCTGGACGCCCTTTGCGAGTATCTCCTCACGAAACCGGATCTGTATCT
AGACGAAATGGCAATTTTCTTATGGGATGAATTCGATACTGTAGTGACAA
CCGCCAGCATCAGGAGGGCGCTCAAATCCGTTGGATGGTCTAAAAAGGCA
GCTCGTCGGATTGCTGGAGAGCGTAATGCGGACTTGCGGGACTGCTATTT
TCATAGCATGTCTGAATTCCGTTCGTACCACCTTATTTATGTCGATGAGT
CGGGATGTGATAAGCGAGTTGGCTTCAGGAGAACGGCCTGGTCCCCTGTT
GGAGTAACACCGGTACAAATCTCTCGGTTTCATCGCGGACAGCGATATCA
AATACTGCCAGCGTATGCCCAGGATGGTGTTATGCTTGCCCGTGTGTTCC
AGGGATCTACTGATGCATCCATATTCGAAGATTTTGTGGAGCAGCTGCTT
CATCATTGCGGGAGGTGGCCGGAGCCCAAATCTGTGCTGATAATGGACAA
TGCATCGTTTCATCATAGCGAGCGCGTGGAACAGCTGTGCAACGATGCTG
GGGTAAAGTTGCTGTACCTGCCTCCATACTCACCGGACCTCAATCCCATT
GAGGAGATGTTTGCAGAGTTGAAGGCGTTCATAAAGCGCAATTGGAATAT
ATATGAAGAGGATCCAGAGCTCAATTTCGATGCCTATCTAGAGTGGTGCA
TCGACGTTGTTGGTGCCAGAAAGCTGAGTGCAGAGGGCATTTTCGTCATG
CTGGGATTACTCTGGAACCACTGCCTCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013049KJC3_013049Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013049-T1KJC3_013049-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013049-T1.utr5p1KJC3_013049-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_013049-T1.utr5p2KJC3_013049-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013049-T1.exon1KJC3_013049-T1.exon1Aspergillus niger KJC3exon
KJC3_013049-T1.exon2KJC3_013049-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013049-T1.cdsKJC3_013049-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013049-T1.utr3p1KJC3_013049-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR038717
DBxrefPFAM:PF13358
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4897695..4899437 +
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