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KJC3_004790-T1, KJC3_004790-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004790-T1
Unique NameKJC3_004790-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:722133..723206-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004790-T1 ID=KJC3_004790-T1|Name=KJC3_004790-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1074bp|location=Sequence derived from alignment at ch4:722133..723206- (Aspergillus niger KJC3)
ATGGATATGCGCAAGAAGAAGAGAAAGGTCCTCTTGATGGGCAAAAGTGG
ATCGGGAAAATCGTCCATGCGCTCAATTATCTTCAGCAATTATGTTGCGA
AAGATGTCCGACGCCTGGGTGCTACCATTGATGTCGAGCACAGCCATGTC
AAGTTCATGGGGAACCTCACGCTGAACCTCTGGGATTGCGGAGGGTAAGT
CGCAGTCTCAGGCATTTCTCGAAACATTCCAGTGTCTAACCCAATGTGCT
CTTTTACCATAAACAGACAGGATGCATTCATGGAAACATATCTCGCGTCT
CAGCGAGGGAACATCTTCTCCGACGTCGCGGTCCTGATCTACGTCTTCGA
CATTGAATCCCGCGAGGTCGAGCGCGATCTTGACACCTACAACGCTATCA
TCAACGCCCTGAAAGAATACAGTCCCAATGCCTACGTATTCTGTCTTGTG
CATAAGCTGGATCTCATCCAGGCCGAGCACCGCCAACGCATTTACGAGGA
ACGGTCGGCCTTGATCCGCAGTCGTTCGGAGCATTTCAGTATCGACACCT
TTGGCAGTAGTATCTGGGATCAATCGCTCTACAAAGCGTGGGCCGGCATC
GTCCACAAACTCATTCCAAATCTGACTGTCATTGAGCGCTTCCTGCAAGC
CTTCGCCAAGCGAATTGATGCCGAGGAAGTCATTCTGTTCGAACGGTCGA
CCTTCCTCACCGTTACTTCCGTTTCCTCAGAAGTAGGCGACATGAACCCC
ATCTACGATCGCCATGAACGTCTCTCCAACATCATGAAAGCCTTCAAGCA
CTGTGCGGCCCGAAACACTCATACAACCCCTGCATCTGCCGGTTTCGTTG
TCATGCACACCAAGACTCCGCAGTTCAATGTCTTCCTCGGCCGTTTCACA
GACAACACATACATTTTTCTGGTTGTGCCGCCTGGCGAAGCAGCCTACAA
CTGCGCCGTTCTCAACACCATGCTAGCTCGCGAGGGCTTCTCCAAAGCCG
CCGCAACCGGTCACGGGGACGGGTTTCCCCTCCCTGCGGCTGAATCCCCG
GACAACAGCAACGGGACCCATTGA
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Coding sequence (CDS) from alignment at ch4:722133..723206-

>KJC3_004790-T1 ID=KJC3_004790-T1|Name=KJC3_004790-T1|organism=Aspergillus niger KJC3|type=CDS|length=2004bp|location=Sequence derived from alignment at ch4:722133..723206- (Aspergillus niger KJC3)
ACAGGATGCATTCATGGAAACATATCTCGCGTCTCAGCGAGGGAACATCT
TCTCCGACGTCGCGGTCCTGATCTACGTCTTCGACATTGAATCCCGCGAG
GTCGAGCGCGATCTTGACACCTACAACGCTATCATCAACGCCCTGAAAGA
ATACAGTCCCAATGCCTACGTATTCTGTCTTGTGCATAAGCTGGATCTCA
TCCAGGCCGAGCACCGCCAACGCATTTACGAGGAACGGTCGGCCTTGATC
CGCAGTCGTTCGGAGCATTTCAGTATCGACACCTTTGGCAGTAGTATCTG
GGATCAATCGCTCTACAAAGCGTGGGCCGGCATCGTCCACAAACTCATTC
CAAATCTGACTGTCATTGAGCGCTTCCTGCAAGCCTTCGCCAAGCGAATT
GATGCCGAGGAAGTCATTCTGTTCGAACGGTCGACCTTCCTCACCGTTAC
TTCCGTTTCCTCAGAAGTAGGCGACATGAACCCCATCTACGATCGCCATG
AACGTCTCTCCAACATCATGAAAGCCTTCAAGCACTGTGCGGCCCGAAAC
ACTCATACAACCCCTGCATCTGCCGGTTTCGTTGTCATGCACACCAAGAC
TCCGCAGTTCAATGTCTTCCTCGGCCGTTTCACAGACAACACATACATTT
TTCTGGTTGTGCCGCCTGGCGAAGCAGCCTACAACTGCGCCGTTCTCAAC
ACCATGCTAGCTCGCGAGGGCTTCTCCAAAGCCGCCGCAACCGGTCACGG
GGACGGGTTTCCCCTCCCTGCGGCTGAATCCCCGGACAACAGCAACGGGA
CCCATTGAATGGATATGCGCAAGAAGAAGAGAAAGGTCCTCTTGATGGGC
AAAAGTGGATCGGGAAAATCGTCCATGCGCTCAATTATCTTCAGCAATTA
TGTTGCGAAAGATGTCCGACGCCTGGGTGCTACCATTGATGTCGAGCACA
GCCATGTCAAGTTCATGGGGAACCTCACGCTGAACCTCTGGGATTGCGGA
GGACAGGATGCATTCATGGAAACATATCTCGCGTCTCAGCGAGGGAACAT
CTTCTCCGACGTCGCGGTCCTGATCTACGTCTTCGACATTGAATCCCGCG
AGGTCGAGCGCGATCTTGACACCTACAACGCTATCATCAACGCCCTGAAA
GAATACAGTCCCAATGCCTACGTATTCTGTCTTGTGCATAAGCTGGATCT
CATCCAGGCCGAGCACCGCCAACGCATTTACGAGGAACGGTCGGCCTTGA
TCCGCAGTCGTTCGGAGCATTTCAGTATCGACACCTTTGGCAGTAGTATC
TGGGATCAATCGCTCTACAAAGCGTGGGCCGGCATCGTCCACAAACTCAT
TCCAAATCTGACTGTCATTGAGCGCTTCCTGCAAGCCTTCGCCAAGCGAA
TTGATGCCGAGGAAGTCATTCTGTTCGAACGGTCGACCTTCCTCACCGTT
ACTTCCGTTTCCTCAGAAGTAGGCGACATGAACCCCATCTACGATCGCCA
TGAACGTCTCTCCAACATCATGAAAGCCTTCAAGCACTGTGCGGCCCGAA
ACACTCATACAACCCCTGCATCTGCCGGTTTCGTTGTCATGCACACCAAG
ACTCCGCAGTTCAATGTCTTCCTCGGCCGTTTCACAGACAACACATACAT
TTTTCTGGTTGTGCCGCCTGGCGAAGCAGCCTACAACTGCGCCGTTCTCA
ACACCATGCTAGCTCGCGAGGGCTTCTCCAAAGCCGCCGCAACCGGTCAC
GGGGACGGGTTTCCCCTCCCTGCGGCTGAATCCCCGGACAACAGCAACGG
GACCCATTGAATGGATATGCGCAAGAAGAAGAGAAAGGTCCTCTTGATGG
GCAAAAGTGGATCGGGAAAATCGTCCATGCGCTCAATTATCTTCAGCAAT
TATGTTGCGAAAGATGTCCGACGCCTGGGTGCTACCATTGATGTCGAGCA
CAGCCATGTCAAGTTCATGGGGAACCTCACGCTGAACCTCTGGGATTGCG
GAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004790KJC3_004790Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004790-T1KJC3_004790-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004790-T1.cdsKJC3_004790-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004790-T1.exon2KJC3_004790-T1.exon2Aspergillus niger KJC3exon
KJC3_004790-T1.exon1KJC3_004790-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09264IV9
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR039397
DBxrefInterPro:IPR006762
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:722133..723206 -
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